RNA–Protein interactions for RNA: ENST00000379056.5

TPT1-203, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-203ENST00000379056 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
TPT1-203ENST00000379056 ABCC9O60706 1549 aa26.77■■□□□ 1.88
TPT1-203ENST00000379056 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
TPT1-203ENST00000379056 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
TPT1-203ENST00000379056 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
TPT1-203ENST00000379056 NACADO15069 1562 aa25.36■■□□□ 1.65
TPT1-203ENST00000379056 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
TPT1-203ENST00000379056 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
TPT1-203ENST00000379056 DNAJC5BQ9UF47 199 aa25.04■■□□□ 1.6
TPT1-203ENST00000379056 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
TPT1-203ENST00000379056 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
TPT1-203ENST00000379056 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
TPT1-203ENST00000379056 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
TPT1-203ENST00000379056 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
TPT1-203ENST00000379056 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
TPT1-203ENST00000379056 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
TPT1-203ENST00000379056 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
TPT1-203ENST00000379056 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
TPT1-203ENST00000379056 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
TPT1-203ENST00000379056 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
TPT1-203ENST00000379056 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
TPT1-203ENST00000379056 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
TPT1-203ENST00000379056 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
TPT1-203ENST00000379056 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
TPT1-203ENST00000379056 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
TPT1-203ENST00000379056 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
TPT1-203ENST00000379056 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
TPT1-203ENST00000379056 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
TPT1-203ENST00000379056 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
TPT1-203ENST00000379056 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
TPT1-203ENST00000379056 CUX2O14529 1486 aa22.99■■□□□ 1.27
TPT1-203ENST00000379056 NESP48681 1621 aa22.99■■□□□ 1.27
TPT1-203ENST00000379056 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
TPT1-203ENST00000379056 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
TPT1-203ENST00000379056 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
TPT1-203ENST00000379056 WIZO95785 1651 aa22.81■■□□□ 1.24
TPT1-203ENST00000379056 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
TPT1-203ENST00000379056 RSF1Q96T23 1441 aaPredicted RBP22.7■■□□□ 1.22
TPT1-203ENST00000379056 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
TPT1-203ENST00000379056 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
TPT1-203ENST00000379056 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
TPT1-203ENST00000379056 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.19
TPT1-203ENST00000379056 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
TPT1-203ENST00000379056 CFTRP13569 1480 aa22.47■■□□□ 1.19
TPT1-203ENST00000379056 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
TPT1-203ENST00000379056 WDR62O43379 1518 aa22.4■■□□□ 1.18
TPT1-203ENST00000379056 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.16
TPT1-203ENST00000379056 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
TPT1-203ENST00000379056 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
TPT1-203ENST00000379056 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
TPT1-203ENST00000379056 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
TPT1-203ENST00000379056 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
TPT1-203ENST00000379056 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
TPT1-203ENST00000379056 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
TPT1-203ENST00000379056 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
TPT1-203ENST00000379056 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
TPT1-203ENST00000379056 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
TPT1-203ENST00000379056 FBLN2P98095 1184 aa21.84■■□□□ 1.09
TPT1-203ENST00000379056 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.095e-9■■■■■ 28.2
TPT1-203ENST00000379056 SOGA1O94964 1423 aa21.83■■□□□ 1.09
TPT1-203ENST00000379056 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
TPT1-203ENST00000379056 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
TPT1-203ENST00000379056 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
TPT1-203ENST00000379056 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.07
TPT1-203ENST00000379056 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
TPT1-203ENST00000379056 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
TPT1-203ENST00000379056 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
TPT1-203ENST00000379056 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
TPT1-203ENST00000379056 CUX1P39880 1505 aa21.66■■□□□ 1.06
TPT1-203ENST00000379056 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
TPT1-203ENST00000379056 RIMBP3CA6NJZ7 1639 aa21.63■■□□□ 1.05
TPT1-203ENST00000379056 RIMBP3BA6NNM3 1639 aa21.63■■□□□ 1.05
TPT1-203ENST00000379056 RIMBP3Q9UFD9 1639 aa21.63■■□□□ 1.05
TPT1-203ENST00000379056 CHD1O14646 1710 aa21.61■■□□□ 1.05
TPT1-203ENST00000379056 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
TPT1-203ENST00000379056 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
TPT1-203ENST00000379056 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
TPT1-203ENST00000379056 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
TPT1-203ENST00000379056 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.04
TPT1-203ENST00000379056 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.03
TPT1-203ENST00000379056 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
TPT1-203ENST00000379056 SYNJ2O15056 1496 aa21.45■■□□□ 1.03
TPT1-203ENST00000379056 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
TPT1-203ENST00000379056 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
TPT1-203ENST00000379056 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
TPT1-203ENST00000379056 PBRM1Q86U86 1689 aa21.38■■□□□ 1.01
TPT1-203ENST00000379056 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
TPT1-203ENST00000379056 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
TPT1-203ENST00000379056 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
TPT1-203ENST00000379056 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
TPT1-203ENST00000379056 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
TPT1-203ENST00000379056 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
TPT1-203ENST00000379056 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
TPT1-203ENST00000379056 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
TPT1-203ENST00000379056 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
TPT1-203ENST00000379056 ADAMTS12P58397 1594 aa21.17■□□□□ 0.98
TPT1-203ENST00000379056 NUP160Q12769 1436 aa21.15■□□□□ 0.98
TPT1-203ENST00000379056 JPH4Q96JJ6 628 aa21.14■□□□□ 0.97
TPT1-203ENST00000379056 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
TPT1-203ENST00000379056 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms