Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.428e-7■□□□□ 11.3
LARP4Q71RC2 TGFBI-205ENST00000506699 3159 ntTSL 211.51□□□□□ -0.578e-7■□□□□ 11.3
LARP4Q71RC2 PHGDH-210ENST00000641115 1638 ntBASIC19.03■□□□□ 0.642e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-209ENST00000641074 1780 ntBASIC17.79■□□□□ 0.442e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-226ENST00000641756 2132 nt17.72■□□□□ 0.432e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-232ENST00000641947 1774 nt17.14■□□□□ 0.332e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-211ENST00000641213 2053 nt17.01■□□□□ 0.312e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17■□□□□ 0.312e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-229ENST00000641891 2175 nt16.88■□□□□ 0.292e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.84■□□□□ 0.292e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-230ENST00000641927 1678 nt16.67■□□□□ 0.262e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.37■□□□□ 0.212e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-216ENST00000641375 2196 nt16.14■□□□□ 0.172e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-227ENST00000641811 1031 nt15.86■□□□□ 0.132e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-205ENST00000482968 1754 ntTSL 214.41□□□□□ -0.12e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-233ENST00000642021 2794 nt13.89□□□□□ -0.192e-6■□□□□ 11.3
LARP4Q71RC2 PHGDH-201ENST00000369407 3180 ntTSL 212.31□□□□□ -0.442e-6■□□□□ 11.3
LARP4Q71RC2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.171e-7■□□□□ 11.3
LARP4Q71RC2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.051e-7■□□□□ 11.3
LARP4Q71RC2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.591e-7■□□□□ 11.3
LARP4Q71RC2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.24■□□□□ 0.512e-8■□□□□ 11.3
LARP4Q71RC2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.16■□□□□ 0.52e-8■□□□□ 11.3
LARP4Q71RC2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.471e-7■□□□□ 11.3
LARP4Q71RC2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.41e-7■□□□□ 11.3
LARP4Q71RC2 SSC4D-202ENST00000492979 1224 ntTSL 517.2■□□□□ 0.341e-7■□□□□ 11.3
LARP4Q71RC2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.86■□□□□ 0.291e-7■□□□□ 11.3
LARP4Q71RC2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.261e-7■□□□□ 11.3
LARP4Q71RC2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.184e-18■□□□□ 11.3
LARP4Q71RC2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.85■□□□□ 0.132e-10■□□□□ 11.3
LARP4Q71RC2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.69■□□□□ 0.12e-12■□□□□ 11.3
LARP4Q71RC2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.69■□□□□ 0.12e-12■□□□□ 11.3
LARP4Q71RC2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.11e-7■□□□□ 11.3
LARP4Q71RC2 CXXC1-214ENST00000590901 2562 ntTSL 215.33■□□□□ 0.041e-7■□□□□ 11.3
LARP4Q71RC2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.021e-7■□□□□ 11.3
LARP4Q71RC2 CXXC1-209ENST00000587342 802 ntTSL 214.67□□□□□ -0.061e-7■□□□□ 11.3
LARP4Q71RC2 CD276-210ENST00000560928 2181 ntTSL 214.07□□□□□ -0.162e-8■□□□□ 11.3
LARP4Q71RC2 SUMF1-204ENST00000448413 3150 ntTSL 214.06□□□□□ -0.161e-7■□□□□ 11.3
LARP4Q71RC2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.172e-12■□□□□ 11.3
LARP4Q71RC2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.183e-14■□□□□ 11.3
LARP4Q71RC2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.8□□□□□ -0.22e-12■□□□□ 11.3
LARP4Q71RC2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.8□□□□□ -0.22e-12■□□□□ 11.3
LARP4Q71RC2 EHMT2-206ENST00000461880 1825 ntTSL 513.67□□□□□ -0.223e-14■□□□□ 11.3
LARP4Q71RC2 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.242e-8■□□□□ 11.3
LARP4Q71RC2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.243e-14■□□□□ 11.3
LARP4Q71RC2 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.264e-18■□□□□ 11.3
LARP4Q71RC2 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.273e-14■□□□□ 11.3
LARP4Q71RC2 CD276-206ENST00000559073 1844 ntTSL 1 (best)13.32□□□□□ -0.282e-8■□□□□ 11.3
LARP4Q71RC2 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.293e-14■□□□□ 11.3
LARP4Q71RC2 DCAF11-212ENST00000558624 2627 ntTSL 212.74□□□□□ -0.374e-18■□□□□ 11.3
LARP4Q71RC2 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.384e-18■□□□□ 11.3
LARP4Q71RC2 DCAF11-201ENST00000326009 2570 ntTSL 1 (best)12.64□□□□□ -0.394e-18■□□□□ 11.3
LARP4Q71RC2 CD276-207ENST00000559465 1620 ntTSL 1 (best)12.63□□□□□ -0.392e-8■□□□□ 11.3
LARP4Q71RC2 DCAF11-205ENST00000557802 4202 ntTSL 1 (best)12.27□□□□□ -0.454e-18■□□□□ 11.3
LARP4Q71RC2 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.2□□□□□ -0.461e-7■□□□□ 11.3
LARP4Q71RC2 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC12.14□□□□□ -0.474e-18■□□□□ 11.3
LARP4Q71RC2 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC11.79□□□□□ -0.522e-12■□□□□ 11.3
LARP4Q71RC2 TRAPPC4-205ENST00000525079 768 ntTSL 311.74□□□□□ -0.531e-9■□□□□ 11.3
LARP4Q71RC2 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC11.06□□□□□ -0.644e-18■□□□□ 11.3
LARP4Q71RC2 EHMT2-210ENST00000478491 1517 ntTSL 511.04□□□□□ -0.643e-14■□□□□ 11.3
LARP4Q71RC2 EHMT2-211ENST00000480912 3940 ntTSL 510.91□□□□□ -0.663e-14■□□□□ 11.3
LARP4Q71RC2 EHMT2-212ENST00000494816 3036 ntTSL 510.75□□□□□ -0.693e-14■□□□□ 11.3
LARP4Q71RC2 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.732e-12■□□□□ 11.3
LARP4Q71RC2 VDAC2-207ENST00000460044 770 ntTSL 210.41□□□□□ -0.741e-7■□□□□ 11.3
LARP4Q71RC2 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.781e-7■□□□□ 11.3
LARP4Q71RC2 PGK1-203ENST00000476531 960 ntTSL 29.91□□□□□ -0.821e-7■□□□□ 11.3
LARP4Q71RC2 CD276-208ENST00000559978 503 ntTSL 29.02□□□□□ -0.972e-8■□□□□ 11.3
LARP4Q71RC2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.41e-7■□□□□ 11.3
LARP4Q71RC2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.29□□□□□ -1.42e-12■□□□□ 11.3
LARP4Q71RC2 PLEKHB1-218ENST00000544282 375 ntTSL 55.57□□□□□ -1.523e-14■□□□□ 11.3
LARP4Q71RC2 RACK1-207ENST00000503170 461 ntTSL 415.05■□□□□ -05e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-232ENST00000514318 581 ntTSL 314.59□□□□□ -0.075e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-230ENST00000513060 1651 ntTSL 513.02□□□□□ -0.325e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-229ENST00000513027 697 ntTSL 312.16□□□□□ -0.465e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-202ENST00000502548 1090 ntTSL 1 (best)11.87□□□□□ -0.515e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-223ENST00000510199 1100 ntTSL 311.4□□□□□ -0.585e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-226ENST00000511900 922 ntTSL 5 BASIC10.63□□□□□ -0.715e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.825e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-212ENST00000505461 1005 ntTSL 59.45□□□□□ -0.95e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-234ENST00000515417 873 ntTSL 38.92□□□□□ -0.985e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-219ENST00000508682 1208 ntTSL 58.88□□□□□ -0.995e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-224ENST00000511473 1150 ntTSL 58.84□□□□□ -0.995e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-225ENST00000511566 825 ntTSL 3 BASIC8.84□□□□□ -0.995e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-210ENST00000504325 1098 ntTSL 1 (best)8.8□□□□□ -15e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-228ENST00000512968 1058 ntTSL 58.17□□□□□ -1.15e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-215ENST00000507261 590 ntTSL 38.13□□□□□ -1.115e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.11□□□□□ -1.115e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-208ENST00000503494 843 ntTSL 38.03□□□□□ -1.125e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.61□□□□□ -1.195e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-213ENST00000506312 559 ntTSL 56.84□□□□□ -1.315e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-206ENST00000503081 587 ntTSL 36.76□□□□□ -1.335e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.38□□□□□ -1.395e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-214ENST00000507000 685 ntTSL 56.36□□□□□ -1.395e-28■□□□□ 11.3
LARP4Q71RC2 RACK1-220ENST00000508963 581 ntTSL 26.01□□□□□ -1.455e-28■□□□□ 11.3
LARP4Q71RC2 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.564e-11■□□□□ 11.3
LARP4Q71RC2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.584e-7■□□□□ 11.3
LARP4Q71RC2 AC073896.1-203ENST00000548360 512 ntTSL 417.8■□□□□ 0.444e-7■□□□□ 11.3
LARP4Q71RC2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.234e-7■□□□□ 11.3
LARP4Q71RC2 AC073896.1-202ENST00000547423 566 ntTSL 416.27■□□□□ 0.24e-7■□□□□ 11.3
LARP4Q71RC2 ORM2-201ENST00000431067 760 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.693e-9■□□□□ 11.3
LARP4Q71RC2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.382e-6■□□□□ 11.3
Retrieved 100 of 15,922 protein–RNA pairs in 195 ms