RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
SUMO1-206ENST00000409368 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
SUMO1-206ENST00000409368 ABCC9O60706 1549 aa27.95■■■□□ 2.06
SUMO1-206ENST00000409368 AEBP2Q6ZN18 517 aaPredicted RBP27.63■■■□□ 2.01
SUMO1-206ENST00000409368 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
SUMO1-206ENST00000409368 NACADO15069 1562 aa26.9■■□□□ 1.9
SUMO1-206ENST00000409368 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
SUMO1-206ENST00000409368 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
SUMO1-206ENST00000409368 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
SUMO1-206ENST00000409368 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
SUMO1-206ENST00000409368 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
SUMO1-206ENST00000409368 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
SUMO1-206ENST00000409368 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
SUMO1-206ENST00000409368 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
SUMO1-206ENST00000409368 SCRIBQ14160 1630 aa25.91■■□□□ 1.74
SUMO1-206ENST00000409368 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
SUMO1-206ENST00000409368 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
SUMO1-206ENST00000409368 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
SUMO1-206ENST00000409368 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
SUMO1-206ENST00000409368 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
SUMO1-206ENST00000409368 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
SUMO1-206ENST00000409368 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
SUMO1-206ENST00000409368 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
SUMO1-206ENST00000409368 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
SUMO1-206ENST00000409368 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
SUMO1-206ENST00000409368 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
SUMO1-206ENST00000409368 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
SUMO1-206ENST00000409368 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
SUMO1-206ENST00000409368 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
SUMO1-206ENST00000409368 WIZO95785 1651 aa24.32■■□□□ 1.48
SUMO1-206ENST00000409368 RSF1Q96T23 1441 aaPredicted RBP24.28■■□□□ 1.48
SUMO1-206ENST00000409368 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
SUMO1-206ENST00000409368 NESP48681 1621 aa24.17■■□□□ 1.46
SUMO1-206ENST00000409368 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
SUMO1-206ENST00000409368 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
SUMO1-206ENST00000409368 CUX2O14529 1486 aa24.05■■□□□ 1.44
SUMO1-206ENST00000409368 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
SUMO1-206ENST00000409368 PDS5BQ9NTI5 1447 aa23.97■■□□□ 1.43
SUMO1-206ENST00000409368 THOC2Q8NI27 1593 aaKnown RBP23.94■■□□□ 1.42
SUMO1-206ENST00000409368 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
SUMO1-206ENST00000409368 CFTRP13569 1480 aa23.89■■□□□ 1.42
SUMO1-206ENST00000409368 CCDC88BA6NC98 1476 aa23.79■■□□□ 1.4
SUMO1-206ENST00000409368 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
SUMO1-206ENST00000409368 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
SUMO1-206ENST00000409368 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
SUMO1-206ENST00000409368 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
SUMO1-206ENST00000409368 WDR62O43379 1518 aa23.72■■□□□ 1.39
SUMO1-206ENST00000409368 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
SUMO1-206ENST00000409368 DNAJC5Q9H3Z4 198 aa23.61■■□□□ 1.37
SUMO1-206ENST00000409368 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
SUMO1-206ENST00000409368 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
SUMO1-206ENST00000409368 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
SUMO1-206ENST00000409368 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
SUMO1-206ENST00000409368 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
SUMO1-206ENST00000409368 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
SUMO1-206ENST00000409368 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
SUMO1-206ENST00000409368 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
SUMO1-206ENST00000409368 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
SUMO1-206ENST00000409368 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
SUMO1-206ENST00000409368 CUX1P39880 1505 aa23.11■■□□□ 1.29
SUMO1-206ENST00000409368 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
SUMO1-206ENST00000409368 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
SUMO1-206ENST00000409368 WDR97A6NE52 1622 aa23.04■■□□□ 1.28
SUMO1-206ENST00000409368 SOGA1O94964 1423 aa23■■□□□ 1.27
SUMO1-206ENST00000409368 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
SUMO1-206ENST00000409368 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.26
SUMO1-206ENST00000409368 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
SUMO1-206ENST00000409368 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
SUMO1-206ENST00000409368 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
SUMO1-206ENST00000409368 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
SUMO1-206ENST00000409368 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
SUMO1-206ENST00000409368 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
SUMO1-206ENST00000409368 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
SUMO1-206ENST00000409368 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
SUMO1-206ENST00000409368 CHD1O14646 1710 aa22.79■■□□□ 1.24
SUMO1-206ENST00000409368 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
SUMO1-206ENST00000409368 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
SUMO1-206ENST00000409368 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
SUMO1-206ENST00000409368 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
SUMO1-206ENST00000409368 SNAPC4Q5SXM2 1469 aa22.74■■□□□ 1.23
SUMO1-206ENST00000409368 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
SUMO1-206ENST00000409368 RIMBP3CA6NJZ7 1639 aa22.61■■□□□ 1.21
SUMO1-206ENST00000409368 RIMBP3BA6NNM3 1639 aa22.61■■□□□ 1.21
SUMO1-206ENST00000409368 RIMBP3Q9UFD9 1639 aa22.61■■□□□ 1.21
SUMO1-206ENST00000409368 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
SUMO1-206ENST00000409368 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
SUMO1-206ENST00000409368 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
SUMO1-206ENST00000409368 FBLN2P98095 1184 aa22.57■■□□□ 1.2
SUMO1-206ENST00000409368 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
SUMO1-206ENST00000409368 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
SUMO1-206ENST00000409368 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
SUMO1-206ENST00000409368 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
SUMO1-206ENST00000409368 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
SUMO1-206ENST00000409368 NUP160Q12769 1436 aa22.46■■□□□ 1.19
SUMO1-206ENST00000409368 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
SUMO1-206ENST00000409368 CEP170Q5SW79 1584 aa22.4■■□□□ 1.18
SUMO1-206ENST00000409368 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
SUMO1-206ENST00000409368 IGF1RP08069 1367 aa22.37■■□□□ 1.17
SUMO1-206ENST00000409368 CUL7Q14999 1698 aa22.35■■□□□ 1.17
SUMO1-206ENST00000409368 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms