RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-223ENST00000510199 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
RACK1-223ENST00000510199 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
RACK1-223ENST00000510199 ABCC9O60706 1549 aa23.83■■□□□ 1.41
RACK1-223ENST00000510199 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
RACK1-223ENST00000510199 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.34
RACK1-223ENST00000510199 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
RACK1-223ENST00000510199 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
RACK1-223ENST00000510199 NACADO15069 1562 aa23.29■■□□□ 1.32
RACK1-223ENST00000510199 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
RACK1-223ENST00000510199 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
RACK1-223ENST00000510199 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
RACK1-223ENST00000510199 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
RACK1-223ENST00000510199 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
RACK1-223ENST00000510199 PABPN1Q86U42 306 aaKnown RBP eCLIP22.31■■□□□ 1.16
RACK1-223ENST00000510199 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
RACK1-223ENST00000510199 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
RACK1-223ENST00000510199 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
RACK1-223ENST00000510199 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
RACK1-223ENST00000510199 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
RACK1-223ENST00000510199 RSF1Q96T23 1441 aaPredicted RBP21.65■■□□□ 1.06
RACK1-223ENST00000510199 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
RACK1-223ENST00000510199 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
RACK1-223ENST00000510199 WIZO95785 1651 aa21.59■■□□□ 1.05
RACK1-223ENST00000510199 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
RACK1-223ENST00000510199 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
RACK1-223ENST00000510199 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
RACK1-223ENST00000510199 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
RACK1-223ENST00000510199 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
RACK1-223ENST00000510199 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
RACK1-223ENST00000510199 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
RACK1-223ENST00000510199 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
RACK1-223ENST00000510199 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
RACK1-223ENST00000510199 PRDM2Q13029 1718 aa20.89■□□□□ 0.93
RACK1-223ENST00000510199 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
RACK1-223ENST00000510199 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
RACK1-223ENST00000510199 CFTRP13569 1480 aa20.82■□□□□ 0.92
RACK1-223ENST00000510199 NESP48681 1621 aa20.78■□□□□ 0.92
RACK1-223ENST00000510199 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
RACK1-223ENST00000510199 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
RACK1-223ENST00000510199 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
RACK1-223ENST00000510199 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
RACK1-223ENST00000510199 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
RACK1-223ENST00000510199 ABCC8Q09428 1581 aa20.47■□□□□ 0.87
RACK1-223ENST00000510199 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
RACK1-223ENST00000510199 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
RACK1-223ENST00000510199 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
RACK1-223ENST00000510199 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
RACK1-223ENST00000510199 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
RACK1-223ENST00000510199 CUX1P39880 1505 aa20.37■□□□□ 0.85
RACK1-223ENST00000510199 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
RACK1-223ENST00000510199 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
RACK1-223ENST00000510199 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
RACK1-223ENST00000510199 WDR62O43379 1518 aa20.35■□□□□ 0.85
RACK1-223ENST00000510199 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
RACK1-223ENST00000510199 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
RACK1-223ENST00000510199 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
RACK1-223ENST00000510199 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
RACK1-223ENST00000510199 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
RACK1-223ENST00000510199 CUX2O14529 1486 aa20.14■□□□□ 0.81
RACK1-223ENST00000510199 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
RACK1-223ENST00000510199 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
RACK1-223ENST00000510199 SOGA1O94964 1423 aa20.1■□□□□ 0.81
RACK1-223ENST00000510199 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
RACK1-223ENST00000510199 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
RACK1-223ENST00000510199 ABCA10Q8WWZ4 1543 aa20.06■□□□□ 0.8
RACK1-223ENST00000510199 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
RACK1-223ENST00000510199 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
RACK1-223ENST00000510199 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
RACK1-223ENST00000510199 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
RACK1-223ENST00000510199 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
RACK1-223ENST00000510199 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
RACK1-223ENST00000510199 EEA1Q15075 1411 aa19.91■□□□□ 0.78
RACK1-223ENST00000510199 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
RACK1-223ENST00000510199 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
RACK1-223ENST00000510199 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.771e-12■■■■■ 75.3
RACK1-223ENST00000510199 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
RACK1-223ENST00000510199 GRIN2BQ13224 1484 aa19.83■□□□□ 0.76
RACK1-223ENST00000510199 CUL7Q14999 1698 aa19.81■□□□□ 0.76
RACK1-223ENST00000510199 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
RACK1-223ENST00000510199 IGF1RP08069 1367 aa19.78■□□□□ 0.76
RACK1-223ENST00000510199 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
RACK1-223ENST00000510199 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
RACK1-223ENST00000510199 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
RACK1-223ENST00000510199 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
RACK1-223ENST00000510199 KIF21BO75037 1637 aa19.7■□□□□ 0.74
RACK1-223ENST00000510199 CARMIL1Q5VZK9 1371 aa19.69■□□□□ 0.74
RACK1-223ENST00000510199 PRXQ9BXM0 1461 aa19.68■□□□□ 0.74
RACK1-223ENST00000510199 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
RACK1-223ENST00000510199 CHD1O14646 1710 aa19.66■□□□□ 0.74
RACK1-223ENST00000510199 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
RACK1-223ENST00000510199 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
RACK1-223ENST00000510199 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
RACK1-223ENST00000510199 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
RACK1-223ENST00000510199 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
RACK1-223ENST00000510199 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
RACK1-223ENST00000510199 FBLN2P98095 1184 aa19.52■□□□□ 0.72
RACK1-223ENST00000510199 CEP170Q5SW79 1584 aa19.49■□□□□ 0.71
RACK1-223ENST00000510199 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
RACK1-223ENST00000510199 NUP160Q12769 1436 aa19.46■□□□□ 0.71
RACK1-223ENST00000510199 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms