RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
CXXC1-214ENST00000590901 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
CXXC1-214ENST00000590901 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
CXXC1-214ENST00000590901 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
CXXC1-214ENST00000590901 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
CXXC1-214ENST00000590901 ABCC9O60706 1549 aa27.56■■■□□ 2
CXXC1-214ENST00000590901 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
CXXC1-214ENST00000590901 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
CXXC1-214ENST00000590901 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
CXXC1-214ENST00000590901 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
CXXC1-214ENST00000590901 NACADO15069 1562 aa26.85■■□□□ 1.89
CXXC1-214ENST00000590901 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
CXXC1-214ENST00000590901 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
CXXC1-214ENST00000590901 UNC13AQ9UPW8 1703 aa26.32■■□□□ 1.8
CXXC1-214ENST00000590901 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
CXXC1-214ENST00000590901 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
CXXC1-214ENST00000590901 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.77
CXXC1-214ENST00000590901 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
CXXC1-214ENST00000590901 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
CXXC1-214ENST00000590901 WIZO95785 1651 aa25.95■■□□□ 1.74
CXXC1-214ENST00000590901 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
CXXC1-214ENST00000590901 HRCP23327 699 aa25.78■■□□□ 1.72
CXXC1-214ENST00000590901 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
CXXC1-214ENST00000590901 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
CXXC1-214ENST00000590901 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
CXXC1-214ENST00000590901 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.64
CXXC1-214ENST00000590901 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
CXXC1-214ENST00000590901 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
CXXC1-214ENST00000590901 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
CXXC1-214ENST00000590901 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
CXXC1-214ENST00000590901 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
CXXC1-214ENST00000590901 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
CXXC1-214ENST00000590901 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
CXXC1-214ENST00000590901 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
CXXC1-214ENST00000590901 PPARGC1BQ86YN6 1023 aaKnown RBP25.1■■□□□ 1.61
CXXC1-214ENST00000590901 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
CXXC1-214ENST00000590901 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
CXXC1-214ENST00000590901 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
CXXC1-214ENST00000590901 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
CXXC1-214ENST00000590901 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
CXXC1-214ENST00000590901 PELP1Q8IZL8 1130 aaKnown RBP24.74■■□□□ 1.55
CXXC1-214ENST00000590901 SOGA1O94964 1423 aa24.71■■□□□ 1.55
CXXC1-214ENST00000590901 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
CXXC1-214ENST00000590901 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
CXXC1-214ENST00000590901 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
CXXC1-214ENST00000590901 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
CXXC1-214ENST00000590901 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
CXXC1-214ENST00000590901 CFTRP13569 1480 aa24.49■■□□□ 1.51
CXXC1-214ENST00000590901 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
CXXC1-214ENST00000590901 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
CXXC1-214ENST00000590901 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
CXXC1-214ENST00000590901 CUX1P39880 1505 aa24.36■■□□□ 1.49
CXXC1-214ENST00000590901 NESP48681 1621 aa24.36■■□□□ 1.49
CXXC1-214ENST00000590901 TOP2BQ02880 1626 aa24.34■■□□□ 1.49
CXXC1-214ENST00000590901 BIVM-ERCC5R4GMW8 1640 aa24.25■■□□□ 1.47
CXXC1-214ENST00000590901 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
CXXC1-214ENST00000590901 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
CXXC1-214ENST00000590901 EEA1Q15075 1411 aa24.19■■□□□ 1.46
CXXC1-214ENST00000590901 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
CXXC1-214ENST00000590901 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.46
CXXC1-214ENST00000590901 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
CXXC1-214ENST00000590901 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
CXXC1-214ENST00000590901 RANGAP1P46060 587 aaPredicted RBP24.09■■□□□ 1.45
CXXC1-214ENST00000590901 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
CXXC1-214ENST00000590901 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
CXXC1-214ENST00000590901 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
CXXC1-214ENST00000590901 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
CXXC1-214ENST00000590901 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
CXXC1-214ENST00000590901 KIF21BO75037 1637 aa23.99■■□□□ 1.43
CXXC1-214ENST00000590901 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
CXXC1-214ENST00000590901 CUX2O14529 1486 aa23.95■■□□□ 1.42
CXXC1-214ENST00000590901 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
CXXC1-214ENST00000590901 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
CXXC1-214ENST00000590901 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
CXXC1-214ENST00000590901 TOPBP1Q92547 1522 aa23.91■■□□□ 1.42
CXXC1-214ENST00000590901 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
CXXC1-214ENST00000590901 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
CXXC1-214ENST00000590901 IGF1RP08069 1367 aa23.86■■□□□ 1.41
CXXC1-214ENST00000590901 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
CXXC1-214ENST00000590901 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
CXXC1-214ENST00000590901 CLIP1P30622 1438 aa23.82■■□□□ 1.4
CXXC1-214ENST00000590901 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
CXXC1-214ENST00000590901 MYT1Q01538 1121 aa23.76■■□□□ 1.39
CXXC1-214ENST00000590901 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
CXXC1-214ENST00000590901 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
CXXC1-214ENST00000590901 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
CXXC1-214ENST00000590901 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
CXXC1-214ENST00000590901 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
CXXC1-214ENST00000590901 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
CXXC1-214ENST00000590901 ARAP1Q96P48 1450 aa23.59■■□□□ 1.37
CXXC1-214ENST00000590901 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.37
CXXC1-214ENST00000590901 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
CXXC1-214ENST00000590901 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.36
CXXC1-214ENST00000590901 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
CXXC1-214ENST00000590901 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
CXXC1-214ENST00000590901 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
CXXC1-214ENST00000590901 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.352e-6■■■■□ 20.7
CXXC1-214ENST00000590901 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
CXXC1-214ENST00000590901 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
CXXC1-214ENST00000590901 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms