RNA–Protein interactions for RNA: ENST00000409712.5

SUMO1-209, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-209ENST00000409712 NISCHQ9Y2I1 1504 aa39.64■■■■□ 3.94
SUMO1-209ENST00000409712 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
SUMO1-209ENST00000409712 ABCC9O60706 1549 aa33.76■■■■□ 3
SUMO1-209ENST00000409712 ZCCHC6Q5VYS8 1495 aaKnown RBP33.14■■■□□ 2.9
SUMO1-209ENST00000409712 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
SUMO1-209ENST00000409712 NACADO15069 1562 aa32.84■■■□□ 2.85
SUMO1-209ENST00000409712 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
SUMO1-209ENST00000409712 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
SUMO1-209ENST00000409712 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.84
SUMO1-209ENST00000409712 UNC13AQ9UPW8 1703 aa32.09■■■□□ 2.73
SUMO1-209ENST00000409712 SCRIBQ14160 1630 aa32■■■□□ 2.71
SUMO1-209ENST00000409712 BICRAQ9NZM4 1560 aa31.75■■■□□ 2.67
SUMO1-209ENST00000409712 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
SUMO1-209ENST00000409712 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
SUMO1-209ENST00000409712 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
SUMO1-209ENST00000409712 CECR2Q9BXF3 1484 aa30.79■■■□□ 2.52
SUMO1-209ENST00000409712 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
SUMO1-209ENST00000409712 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
SUMO1-209ENST00000409712 CC2D2AQ9P2K1 1620 aa30.62■■■□□ 2.49
SUMO1-209ENST00000409712 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
SUMO1-209ENST00000409712 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
SUMO1-209ENST00000409712 PEG3Q9GZU2 1588 aa30.4■■■□□ 2.46
SUMO1-209ENST00000409712 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
SUMO1-209ENST00000409712 RSF1Q96T23 1441 aaPredicted RBP30.35■■■□□ 2.45
SUMO1-209ENST00000409712 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
SUMO1-209ENST00000409712 WIZO95785 1651 aa30.27■■■□□ 2.44
SUMO1-209ENST00000409712 NCAPD3P42695 1498 aa30.26■■■□□ 2.44
SUMO1-209ENST00000409712 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
SUMO1-209ENST00000409712 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
SUMO1-209ENST00000409712 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
SUMO1-209ENST00000409712 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
SUMO1-209ENST00000409712 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
SUMO1-209ENST00000409712 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
SUMO1-209ENST00000409712 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.29
SUMO1-209ENST00000409712 NESP48681 1621 aa29.37■■■□□ 2.29
SUMO1-209ENST00000409712 CFTRP13569 1480 aa29.34■■■□□ 2.29
SUMO1-209ENST00000409712 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
SUMO1-209ENST00000409712 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
SUMO1-209ENST00000409712 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
SUMO1-209ENST00000409712 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
SUMO1-209ENST00000409712 FANCD2Q9BXW9 1451 aa29.06■■■□□ 2.24
SUMO1-209ENST00000409712 CEP164Q9UPV0 1460 aa28.99■■■□□ 2.23
SUMO1-209ENST00000409712 THOC2Q8NI27 1593 aaKnown RBP28.89■■■□□ 2.22
SUMO1-209ENST00000409712 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
SUMO1-209ENST00000409712 WDR62O43379 1518 aa28.78■■■□□ 2.2
SUMO1-209ENST00000409712 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
SUMO1-209ENST00000409712 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
SUMO1-209ENST00000409712 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
SUMO1-209ENST00000409712 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
SUMO1-209ENST00000409712 CUX1P39880 1505 aa28.64■■■□□ 2.17
SUMO1-209ENST00000409712 CUX2O14529 1486 aa28.63■■■□□ 2.17
SUMO1-209ENST00000409712 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
SUMO1-209ENST00000409712 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
SUMO1-209ENST00000409712 TOP2BQ02880 1626 aa28.55■■■□□ 2.16
SUMO1-209ENST00000409712 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
SUMO1-209ENST00000409712 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
SUMO1-209ENST00000409712 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
SUMO1-209ENST00000409712 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
SUMO1-209ENST00000409712 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
SUMO1-209ENST00000409712 SOGA1O94964 1423 aa28.31■■■□□ 2.12
SUMO1-209ENST00000409712 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
SUMO1-209ENST00000409712 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
SUMO1-209ENST00000409712 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
SUMO1-209ENST00000409712 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
SUMO1-209ENST00000409712 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
SUMO1-209ENST00000409712 ZNF608Q9ULD9 1512 aaPredicted RBP28.17■■■□□ 2.1
SUMO1-209ENST00000409712 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
SUMO1-209ENST00000409712 ABCA5Q8WWZ7 1642 aa28.1■■■□□ 2.09
SUMO1-209ENST00000409712 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
SUMO1-209ENST00000409712 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.08
SUMO1-209ENST00000409712 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
SUMO1-209ENST00000409712 PBRM1Q86U86 1689 aa28.01■■■□□ 2.07
SUMO1-209ENST00000409712 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
SUMO1-209ENST00000409712 GRIN2BQ13224 1484 aa27.95■■■□□ 2.07
SUMO1-209ENST00000409712 ERICH3Q5RHP9 1530 aa27.9■■■□□ 2.06
SUMO1-209ENST00000409712 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
SUMO1-209ENST00000409712 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
SUMO1-209ENST00000409712 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
SUMO1-209ENST00000409712 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
SUMO1-209ENST00000409712 EEA1Q15075 1411 aa27.79■■■□□ 2.04
SUMO1-209ENST00000409712 CUL7Q14999 1698 aa27.78■■■□□ 2.04
SUMO1-209ENST00000409712 IGF1RP08069 1367 aa27.77■■■□□ 2.04
SUMO1-209ENST00000409712 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
SUMO1-209ENST00000409712 CHD1O14646 1710 aa27.72■■■□□ 2.03
SUMO1-209ENST00000409712 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
SUMO1-209ENST00000409712 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
SUMO1-209ENST00000409712 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
SUMO1-209ENST00000409712 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
SUMO1-209ENST00000409712 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
SUMO1-209ENST00000409712 PRXQ9BXM0 1461 aa27.57■■■□□ 2
SUMO1-209ENST00000409712 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
SUMO1-209ENST00000409712 FBLN2P98095 1184 aa27.56■■■□□ 2
SUMO1-209ENST00000409712 RAPGEF2Q9Y4G8 1499 aa27.54■■■□□ 2
SUMO1-209ENST00000409712 KIF21BO75037 1637 aa27.5■■□□□ 1.99
SUMO1-209ENST00000409712 NUP160Q12769 1436 aa27.47■■□□□ 1.99
SUMO1-209ENST00000409712 CEP170Q5SW79 1584 aa27.46■■□□□ 1.99
SUMO1-209ENST00000409712 OSCARQ8IYS5 282 aa27.45■■□□□ 1.98
SUMO1-209ENST00000409712 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
SUMO1-209ENST00000409712 CTTNBP2Q8WZ74 1663 aa27.35■■□□□ 1.97
SUMO1-209ENST00000409712 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms