RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 NISCHQ9Y2I1 1504 aa40.24■■■■■ 4.03
CXXC1-212ENST00000589940 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
CXXC1-212ENST00000589940 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■□□ 2.99
CXXC1-212ENST00000589940 ABCC9O60706 1549 aa33.57■■■□□ 2.96
CXXC1-212ENST00000589940 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
CXXC1-212ENST00000589940 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
CXXC1-212ENST00000589940 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
CXXC1-212ENST00000589940 NACADO15069 1562 aa32.91■■■□□ 2.86
CXXC1-212ENST00000589940 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
CXXC1-212ENST00000589940 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
CXXC1-212ENST00000589940 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
CXXC1-212ENST00000589940 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
CXXC1-212ENST00000589940 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
CXXC1-212ENST00000589940 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.65
CXXC1-212ENST00000589940 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
CXXC1-212ENST00000589940 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
CXXC1-212ENST00000589940 BAZ1AQ9NRL2 1556 aaPredicted RBP31.11■■■□□ 2.57
CXXC1-212ENST00000589940 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
CXXC1-212ENST00000589940 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
CXXC1-212ENST00000589940 SMARCA4P51532 1647 aa31■■■□□ 2.55
CXXC1-212ENST00000589940 EIF4G1Q04637 1599 aaKnown RBP30.77■■■□□ 2.52
CXXC1-212ENST00000589940 WIZO95785 1651 aa30.77■■■□□ 2.52
CXXC1-212ENST00000589940 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
CXXC1-212ENST00000589940 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
CXXC1-212ENST00000589940 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
CXXC1-212ENST00000589940 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
CXXC1-212ENST00000589940 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
CXXC1-212ENST00000589940 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
CXXC1-212ENST00000589940 NCAPD3P42695 1498 aa30.38■■■□□ 2.45
CXXC1-212ENST00000589940 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
CXXC1-212ENST00000589940 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
CXXC1-212ENST00000589940 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
CXXC1-212ENST00000589940 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
CXXC1-212ENST00000589940 CFTRP13569 1480 aa29.62■■■□□ 2.33
CXXC1-212ENST00000589940 CADPSQ9ULU8 1353 aa29.57■■■□□ 2.32
CXXC1-212ENST00000589940 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
CXXC1-212ENST00000589940 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
CXXC1-212ENST00000589940 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.3
CXXC1-212ENST00000589940 NESP48681 1621 aa29.36■■■□□ 2.29
CXXC1-212ENST00000589940 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
CXXC1-212ENST00000589940 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
CXXC1-212ENST00000589940 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
CXXC1-212ENST00000589940 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
CXXC1-212ENST00000589940 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
CXXC1-212ENST00000589940 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
CXXC1-212ENST00000589940 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
CXXC1-212ENST00000589940 CUX1P39880 1505 aa29.07■■■□□ 2.24
CXXC1-212ENST00000589940 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
CXXC1-212ENST00000589940 KIF21AQ7Z4S6 1674 aa29.01■■■□□ 2.23
CXXC1-212ENST00000589940 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
CXXC1-212ENST00000589940 TOPBP1Q92547 1522 aa28.88■■■□□ 2.21
CXXC1-212ENST00000589940 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
CXXC1-212ENST00000589940 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
CXXC1-212ENST00000589940 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
CXXC1-212ENST00000589940 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
CXXC1-212ENST00000589940 SOGA1O94964 1423 aa28.79■■■□□ 2.2
CXXC1-212ENST00000589940 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
CXXC1-212ENST00000589940 EEA1Q15075 1411 aa28.73■■■□□ 2.19
CXXC1-212ENST00000589940 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
CXXC1-212ENST00000589940 RUSC2Q8N2Y8 1516 aa28.68■■■□□ 2.18
CXXC1-212ENST00000589940 WDR62O43379 1518 aa28.68■■■□□ 2.18
CXXC1-212ENST00000589940 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
CXXC1-212ENST00000589940 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
CXXC1-212ENST00000589940 KIF27Q86VH2 1401 aa28.58■■■□□ 2.17
CXXC1-212ENST00000589940 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
CXXC1-212ENST00000589940 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
CXXC1-212ENST00000589940 CUX2O14529 1486 aa28.56■■■□□ 2.16
CXXC1-212ENST00000589940 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
CXXC1-212ENST00000589940 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
CXXC1-212ENST00000589940 TARBP1Q13395 1621 aaKnown RBP28.47■■■□□ 2.15
CXXC1-212ENST00000589940 IFT140Q96RY7 1462 aa28.42■■■□□ 2.14
CXXC1-212ENST00000589940 TDRD9Q8NDG6 1382 aaKnown RBP28.35■■■□□ 2.13
CXXC1-212ENST00000589940 KIF21BO75037 1637 aa28.34■■■□□ 2.13
CXXC1-212ENST00000589940 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
CXXC1-212ENST00000589940 IGF1RP08069 1367 aa28.34■■■□□ 2.13
CXXC1-212ENST00000589940 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
CXXC1-212ENST00000589940 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
CXXC1-212ENST00000589940 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
CXXC1-212ENST00000589940 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
CXXC1-212ENST00000589940 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
CXXC1-212ENST00000589940 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
CXXC1-212ENST00000589940 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
CXXC1-212ENST00000589940 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.112e-6■■■■□ 20.7
CXXC1-212ENST00000589940 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
CXXC1-212ENST00000589940 CUL7Q14999 1698 aa28.16■■■□□ 2.1
CXXC1-212ENST00000589940 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
CXXC1-212ENST00000589940 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
CXXC1-212ENST00000589940 TNIKQ9UKE5 1360 aa28.14■■■□□ 2.1
CXXC1-212ENST00000589940 GRIN2BQ13224 1484 aa28.14■■■□□ 2.1
CXXC1-212ENST00000589940 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
CXXC1-212ENST00000589940 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
CXXC1-212ENST00000589940 ADAMTS12P58397 1594 aa28■■■□□ 2.07
CXXC1-212ENST00000589940 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
CXXC1-212ENST00000589940 CEP162Q5TB80 1403 aa27.96■■■□□ 2.07
CXXC1-212ENST00000589940 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
CXXC1-212ENST00000589940 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
CXXC1-212ENST00000589940 CLIP1P30622 1438 aa27.82■■■□□ 2.04
CXXC1-212ENST00000589940 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
CXXC1-212ENST00000589940 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
CXXC1-212ENST00000589940 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms