RNA–Protein interactions for RNA: ENST00000318424.9

CD276-201, Transcript of CD276 molecule, humanhuman

TSL 5 BASIC

Gene CD276, Length 2,738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD276-201ENST00000318424 NISCHQ9Y2I1 1504 aa38.56■■■■□ 3.76
CD276-201ENST00000318424 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
CD276-201ENST00000318424 CCDC180Q9P1Z9 1646 aa32.78■■■□□ 2.84
CD276-201ENST00000318424 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
CD276-201ENST00000318424 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
CD276-201ENST00000318424 SUPT5HO00267 1087 aaKnown RBP32.14■■■□□ 2.74
CD276-201ENST00000318424 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.63
CD276-201ENST00000318424 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
CD276-201ENST00000318424 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
CD276-201ENST00000318424 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
CD276-201ENST00000318424 ABCC9O60706 1549 aa30.81■■■□□ 2.52
CD276-201ENST00000318424 RSF1Q96T23 1441 aaPredicted RBP30.46■■■□□ 2.47
CD276-201ENST00000318424 NACADO15069 1562 aa30.4■■■□□ 2.46
CD276-201ENST00000318424 LOC105371045A0A1W2PR82 267 aa30.23■■■□□ 2.43
CD276-201ENST00000318424 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
CD276-201ENST00000318424 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
CD276-201ENST00000318424 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
CD276-201ENST00000318424 PCGF6Q9BYE7 350 aa29.88■■■□□ 2.37
CD276-201ENST00000318424 TRIM41Q8WV44 630 aa29.87■■■□□ 2.37
CD276-201ENST00000318424 WIZO95785 1651 aa29.86■■■□□ 2.37
CD276-201ENST00000318424 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
CD276-201ENST00000318424 EHMT2Q96KQ7 1210 aa29.6■■■□□ 2.33
CD276-201ENST00000318424 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
CD276-201ENST00000318424 HRCP23327 699 aa29.59■■■□□ 2.33
CD276-201ENST00000318424 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
CD276-201ENST00000318424 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
CD276-201ENST00000318424 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
CD276-201ENST00000318424 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
CD276-201ENST00000318424 TRIM26Q12899 539 aaPredicted RBP29.26■■■□□ 2.27
CD276-201ENST00000318424 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
CD276-201ENST00000318424 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
CD276-201ENST00000318424 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
CD276-201ENST00000318424 PPARGC1BQ86YN6 1023 aaKnown RBP29.21■■■□□ 2.27
CD276-201ENST00000318424 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
CD276-201ENST00000318424 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
CD276-201ENST00000318424 SOGA1O94964 1423 aa28.83■■■□□ 2.21
CD276-201ENST00000318424 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
CD276-201ENST00000318424 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
CD276-201ENST00000318424 RUSC2Q8N2Y8 1516 aa28.72■■■□□ 2.19
CD276-201ENST00000318424 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
CD276-201ENST00000318424 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
CD276-201ENST00000318424 CSRNP3Q8WYN3 585 aa28.6■■■□□ 2.17
CD276-201ENST00000318424 TTBK1Q5TCY1 1321 aaPredicted RBP28.54■■■□□ 2.16
CD276-201ENST00000318424 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
CD276-201ENST00000318424 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
CD276-201ENST00000318424 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
CD276-201ENST00000318424 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
CD276-201ENST00000318424 EEA1Q15075 1411 aa28.43■■■□□ 2.14
CD276-201ENST00000318424 ZEB1P37275 1124 aaPredicted RBP28.39■■■□□ 2.13
CD276-201ENST00000318424 GOLGA3Q08378 1498 aa28.3■■■□□ 2.12
CD276-201ENST00000318424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
CD276-201ENST00000318424 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
CD276-201ENST00000318424 RANGAP1P46060 587 aaPredicted RBP28.16■■■□□ 2.1
CD276-201ENST00000318424 CEP164Q9UPV0 1460 aa28.16■■■□□ 2.1
CD276-201ENST00000318424 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
CD276-201ENST00000318424 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
CD276-201ENST00000318424 RAPGEF2Q9Y4G8 1499 aa28.1■■■□□ 2.09
CD276-201ENST00000318424 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
CD276-201ENST00000318424 KIF21BO75037 1637 aa28.09■■■□□ 2.09
CD276-201ENST00000318424 CLIP1P30622 1438 aa28.02■■■□□ 2.08
CD276-201ENST00000318424 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
CD276-201ENST00000318424 CUX1P39880 1505 aa27.95■■■□□ 2.06
CD276-201ENST00000318424 CFTRP13569 1480 aa27.91■■■□□ 2.06
CD276-201ENST00000318424 VPS8Q8N3P4 1428 aa27.83■■■□□ 2.05
CD276-201ENST00000318424 HNRNPUL2Q1KMD3 747 aaKnown RBP27.78■■■□□ 2.04
CD276-201ENST00000318424 PRXQ9BXM0 1461 aa27.78■■■□□ 2.04
CD276-201ENST00000318424 APLP2Q06481 763 aa27.75■■■□□ 2.03
CD276-201ENST00000318424 KIF27Q86VH2 1401 aa27.72■■■□□ 2.03
CD276-201ENST00000318424 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
CD276-201ENST00000318424 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
CD276-201ENST00000318424 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
CD276-201ENST00000318424 ARAP1Q96P48 1450 aa27.6■■■□□ 2.01
CD276-201ENST00000318424 CUX2O14529 1486 aa27.56■■■□□ 2
CD276-201ENST00000318424 PRDM2Q13029 1718 aa27.56■■■□□ 2
CD276-201ENST00000318424 KANK4Q5T7N3 995 aaPredicted RBP27.54■■■□□ 2
CD276-201ENST00000318424 IGF1RP08069 1367 aa27.5■■□□□ 1.99
CD276-201ENST00000318424 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
CD276-201ENST00000318424 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
CD276-201ENST00000318424 ARHGAP35Q9NRY4 1499 aa27.42■■□□□ 1.98
CD276-201ENST00000318424 NESP48681 1621 aa27.4■■□□□ 1.98
CD276-201ENST00000318424 DIEXFQ68CQ4 756 aaKnown RBP27.39■■□□□ 1.97
CD276-201ENST00000318424 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
CD276-201ENST00000318424 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
CD276-201ENST00000318424 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
CD276-201ENST00000318424 P3H3Q8IVL6 736 aa27.25■■□□□ 1.95
CD276-201ENST00000318424 ZNF316A6NFI3 1004 aaPredicted RBP27.24■■□□□ 1.95
CD276-201ENST00000318424 TOPBP1Q92547 1522 aa27.2■■□□□ 1.95
CD276-201ENST00000318424 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
CD276-201ENST00000318424 ITGAEP38570 1179 aa27.19■■□□□ 1.94
CD276-201ENST00000318424 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
CD276-201ENST00000318424 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
CD276-201ENST00000318424 RRBP1Q9P2E9 1410 aaKnown RBP27.13■■□□□ 1.93
CD276-201ENST00000318424 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
CD276-201ENST00000318424 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
CD276-201ENST00000318424 DHX57Q6P158 1386 aaKnown RBP27.09■■□□□ 1.93
CD276-201ENST00000318424 CCNB3Q8WWL7 1395 aa27.08■■□□□ 1.93
CD276-201ENST00000318424 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
CD276-201ENST00000318424 TIAM1Q13009 1591 aa27.02■■□□□ 1.92
CD276-201ENST00000318424 NEUROD1Q13562 356 aa27.02■■□□□ 1.92
CD276-201ENST00000318424 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms