RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
RACK1-227ENST00000512805 ABCC9O60706 1549 aa25.81■■□□□ 1.72
RACK1-227ENST00000512805 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
RACK1-227ENST00000512805 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
RACK1-227ENST00000512805 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
RACK1-227ENST00000512805 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
RACK1-227ENST00000512805 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
RACK1-227ENST00000512805 NACADO15069 1562 aa23.62■■□□□ 1.37
RACK1-227ENST00000512805 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
RACK1-227ENST00000512805 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
RACK1-227ENST00000512805 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
RACK1-227ENST00000512805 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
RACK1-227ENST00000512805 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
RACK1-227ENST00000512805 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
RACK1-227ENST00000512805 MYO15BQ96JP2 1530 aa22.95■■□□□ 1.26
RACK1-227ENST00000512805 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
RACK1-227ENST00000512805 CUX2O14529 1486 aa22.82■■□□□ 1.24
RACK1-227ENST00000512805 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
RACK1-227ENST00000512805 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
RACK1-227ENST00000512805 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
RACK1-227ENST00000512805 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
RACK1-227ENST00000512805 ZCCHC6Q5VYS8 1495 aaKnown RBP21.99■■□□□ 1.11
RACK1-227ENST00000512805 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
RACK1-227ENST00000512805 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
RACK1-227ENST00000512805 NESP48681 1621 aa21.83■■□□□ 1.09
RACK1-227ENST00000512805 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
RACK1-227ENST00000512805 ATAD2BQ9ULI0 1458 aa21.57■■□□□ 1.04
RACK1-227ENST00000512805 SMARCA2P51531 1590 aa21.56■■□□□ 1.04
RACK1-227ENST00000512805 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
RACK1-227ENST00000512805 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
RACK1-227ENST00000512805 BAZ1AQ9NRL2 1556 aaPredicted RBP21.52■■□□□ 1.04
RACK1-227ENST00000512805 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
RACK1-227ENST00000512805 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
RACK1-227ENST00000512805 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
RACK1-227ENST00000512805 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
RACK1-227ENST00000512805 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
RACK1-227ENST00000512805 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
RACK1-227ENST00000512805 WDR62O43379 1518 aa21.31■■□□□ 1
RACK1-227ENST00000512805 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
RACK1-227ENST00000512805 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
RACK1-227ENST00000512805 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
RACK1-227ENST00000512805 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
RACK1-227ENST00000512805 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
RACK1-227ENST00000512805 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
RACK1-227ENST00000512805 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
RACK1-227ENST00000512805 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
RACK1-227ENST00000512805 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
RACK1-227ENST00000512805 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
RACK1-227ENST00000512805 ILDR1Q86SU0 546 aaPredicted RBP20.9■□□□□ 0.94
RACK1-227ENST00000512805 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
RACK1-227ENST00000512805 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
RACK1-227ENST00000512805 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
RACK1-227ENST00000512805 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
RACK1-227ENST00000512805 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
RACK1-227ENST00000512805 CFTRP13569 1480 aa20.6■□□□□ 0.89
RACK1-227ENST00000512805 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
RACK1-227ENST00000512805 CHD1O14646 1710 aa20.55■□□□□ 0.88
RACK1-227ENST00000512805 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
RACK1-227ENST00000512805 FBLN2P98095 1184 aa20.38■□□□□ 0.85
RACK1-227ENST00000512805 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
RACK1-227ENST00000512805 AQRO60306 1485 aaKnown RBP eCLIP20.33■□□□□ 0.853e-10■■■■■ 58.2
RACK1-227ENST00000512805 WIZO95785 1651 aa20.32■□□□□ 0.84
RACK1-227ENST00000512805 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
RACK1-227ENST00000512805 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
RACK1-227ENST00000512805 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
RACK1-227ENST00000512805 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
RACK1-227ENST00000512805 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
RACK1-227ENST00000512805 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
RACK1-227ENST00000512805 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
RACK1-227ENST00000512805 DNMBPQ6XZF7 1577 aa20.1■□□□□ 0.81
RACK1-227ENST00000512805 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
RACK1-227ENST00000512805 CHMP7Q8WUX9 453 aaPredicted RBP20.09■□□□□ 0.81
RACK1-227ENST00000512805 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
RACK1-227ENST00000512805 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
RACK1-227ENST00000512805 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
RACK1-227ENST00000512805 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
RACK1-227ENST00000512805 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
RACK1-227ENST00000512805 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
RACK1-227ENST00000512805 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
RACK1-227ENST00000512805 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
RACK1-227ENST00000512805 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
RACK1-227ENST00000512805 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
RACK1-227ENST00000512805 SOGA1O94964 1423 aa19.9■□□□□ 0.78
RACK1-227ENST00000512805 HECW2Q9P2P5 1572 aa19.88■□□□□ 0.77
RACK1-227ENST00000512805 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
RACK1-227ENST00000512805 KDM6BO15054 1643 aa19.85■□□□□ 0.77
RACK1-227ENST00000512805 ABCC10Q5T3U5 1492 aa19.85■□□□□ 0.77
RACK1-227ENST00000512805 FAM69CQ0P6D2 419 aa19.85■□□□□ 0.77
RACK1-227ENST00000512805 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
RACK1-227ENST00000512805 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
RACK1-227ENST00000512805 ADGRL1O94910 1474 aa19.76■□□□□ 0.75
RACK1-227ENST00000512805 CEP170Q5SW79 1584 aa19.75■□□□□ 0.75
RACK1-227ENST00000512805 DIP2BQ9P265 1576 aa19.72■□□□□ 0.75
RACK1-227ENST00000512805 SOCS7O14512 581 aa19.7■□□□□ 0.74
RACK1-227ENST00000512805 MAPKBP1O60336 1514 aa19.7■□□□□ 0.74
RACK1-227ENST00000512805 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
RACK1-227ENST00000512805 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
RACK1-227ENST00000512805 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
RACK1-227ENST00000512805 NUP160Q12769 1436 aa19.63■□□□□ 0.73
RACK1-227ENST00000512805 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms