RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
CXXC1-209ENST00000587342 CCDC180Q9P1Z9 1646 aa35.75■■■■□ 3.31
CXXC1-209ENST00000587342 ABCC9O60706 1549 aa35.35■■■■□ 3.25
CXXC1-209ENST00000587342 RB1CC1Q8TDY2 1594 aa33.78■■■■□ 3
CXXC1-209ENST00000587342 NACADO15069 1562 aa33.66■■■□□ 2.98
CXXC1-209ENST00000587342 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
CXXC1-209ENST00000587342 MYO15BQ96JP2 1530 aa33.34■■■□□ 2.93
CXXC1-209ENST00000587342 ZCCHC6Q5VYS8 1495 aaKnown RBP33.32■■■□□ 2.92
CXXC1-209ENST00000587342 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
CXXC1-209ENST00000587342 DCAF1Q9Y4B6 1507 aa33.09■■■□□ 2.89
CXXC1-209ENST00000587342 PABPN1Q86U42 306 aaKnown RBP eCLIP32.94■■■□□ 2.86
CXXC1-209ENST00000587342 BICRAQ9NZM4 1560 aa32.9■■■□□ 2.86
CXXC1-209ENST00000587342 DNAJC5BQ9UF47 199 aa32.81■■■□□ 2.84
CXXC1-209ENST00000587342 SCRIBQ14160 1630 aa32.64■■■□□ 2.82
CXXC1-209ENST00000587342 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
CXXC1-209ENST00000587342 EIF4G1Q04637 1599 aaKnown RBP32■■■□□ 2.71
CXXC1-209ENST00000587342 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
CXXC1-209ENST00000587342 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
CXXC1-209ENST00000587342 SMARCA4P51532 1647 aa31.17■■■□□ 2.58
CXXC1-209ENST00000587342 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
CXXC1-209ENST00000587342 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
CXXC1-209ENST00000587342 BAZ1AQ9NRL2 1556 aaPredicted RBP31.03■■■□□ 2.56
CXXC1-209ENST00000587342 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
CXXC1-209ENST00000587342 HMGXB3Q12766 1538 aa30.92■■■□□ 2.54
CXXC1-209ENST00000587342 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
CXXC1-209ENST00000587342 PEG3Q9GZU2 1588 aa30.87■■■□□ 2.53
CXXC1-209ENST00000587342 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.52
CXXC1-209ENST00000587342 WIZO95785 1651 aa30.55■■■□□ 2.48
CXXC1-209ENST00000587342 NESP48681 1621 aa30.53■■■□□ 2.48
CXXC1-209ENST00000587342 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
CXXC1-209ENST00000587342 RSF1Q96T23 1441 aaPredicted RBP30.39■■■□□ 2.45
CXXC1-209ENST00000587342 LAMC3Q9Y6N6 1575 aa30.3■■■□□ 2.44
CXXC1-209ENST00000587342 CUX2O14529 1486 aa30.25■■■□□ 2.43
CXXC1-209ENST00000587342 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
CXXC1-209ENST00000587342 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
CXXC1-209ENST00000587342 KIF21AQ7Z4S6 1674 aa30.14■■■□□ 2.42
CXXC1-209ENST00000587342 CADPSQ9ULU8 1353 aa30.14■■■□□ 2.41
CXXC1-209ENST00000587342 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
CXXC1-209ENST00000587342 CFTRP13569 1480 aa29.92■■■□□ 2.38
CXXC1-209ENST00000587342 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
CXXC1-209ENST00000587342 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
CXXC1-209ENST00000587342 CCDC88BA6NC98 1476 aa29.81■■■□□ 2.36
CXXC1-209ENST00000587342 WDR62O43379 1518 aa29.81■■■□□ 2.36
CXXC1-209ENST00000587342 CEP164Q9UPV0 1460 aa29.8■■■□□ 2.36
CXXC1-209ENST00000587342 DNAJC5Q9H3Z4 198 aa29.71■■■□□ 2.35
CXXC1-209ENST00000587342 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
CXXC1-209ENST00000587342 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
CXXC1-209ENST00000587342 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
CXXC1-209ENST00000587342 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
CXXC1-209ENST00000587342 DNMBPQ6XZF7 1577 aa29.25■■■□□ 2.27
CXXC1-209ENST00000587342 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
CXXC1-209ENST00000587342 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
CXXC1-209ENST00000587342 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
CXXC1-209ENST00000587342 TARBP1Q13395 1621 aaKnown RBP29.07■■■□□ 2.24
CXXC1-209ENST00000587342 POLA1P09884 1462 aaPredicted RBP29.06■■■□□ 2.24
CXXC1-209ENST00000587342 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
CXXC1-209ENST00000587342 CUX1P39880 1505 aa29.01■■■□□ 2.23
CXXC1-209ENST00000587342 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
CXXC1-209ENST00000587342 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
CXXC1-209ENST00000587342 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.228e-6■■□□□ 13.1
CXXC1-209ENST00000587342 SOGA1O94964 1423 aa28.86■■■□□ 2.21
CXXC1-209ENST00000587342 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
CXXC1-209ENST00000587342 TDRD9Q8NDG6 1382 aaKnown RBP28.78■■■□□ 2.2
CXXC1-209ENST00000587342 WDR97A6NE52 1622 aa28.76■■■□□ 2.2
CXXC1-209ENST00000587342 CHD1O14646 1710 aa28.72■■■□□ 2.19
CXXC1-209ENST00000587342 SYNJ1O43426 1573 aa28.67■■■□□ 2.18
CXXC1-209ENST00000587342 SNAPC4Q5SXM2 1469 aa28.65■■■□□ 2.18
CXXC1-209ENST00000587342 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
CXXC1-209ENST00000587342 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
CXXC1-209ENST00000587342 ABCA10Q8WWZ4 1543 aa28.62■■■□□ 2.17
CXXC1-209ENST00000587342 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
CXXC1-209ENST00000587342 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
CXXC1-209ENST00000587342 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
CXXC1-209ENST00000587342 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
CXXC1-209ENST00000587342 RIMBP3CA6NJZ7 1639 aa28.57■■■□□ 2.16
CXXC1-209ENST00000587342 RIMBP3BA6NNM3 1639 aa28.57■■■□□ 2.16
CXXC1-209ENST00000587342 RIMBP3Q9UFD9 1639 aa28.57■■■□□ 2.16
CXXC1-209ENST00000587342 PBRM1Q86U86 1689 aa28.56■■■□□ 2.16
CXXC1-209ENST00000587342 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
CXXC1-209ENST00000587342 GAPVD1Q14C86 1478 aa28.54■■■□□ 2.16
CXXC1-209ENST00000587342 FBLN2P98095 1184 aa28.52■■■□□ 2.16
CXXC1-209ENST00000587342 ARHGEF11O15085 1522 aa28.52■■■□□ 2.16
CXXC1-209ENST00000587342 SYNJ2O15056 1496 aa28.46■■■□□ 2.15
CXXC1-209ENST00000587342 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
CXXC1-209ENST00000587342 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
CXXC1-209ENST00000587342 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
CXXC1-209ENST00000587342 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
CXXC1-209ENST00000587342 GRIN2AQ12879 1464 aa28.26■■■□□ 2.11
CXXC1-209ENST00000587342 ERICH3Q5RHP9 1530 aa28.24■■■□□ 2.11
CXXC1-209ENST00000587342 FHAD1B1AJZ9 1412 aa28.19■■■□□ 2.1
CXXC1-209ENST00000587342 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
CXXC1-209ENST00000587342 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
CXXC1-209ENST00000587342 NUP160Q12769 1436 aa28.16■■■□□ 2.1
CXXC1-209ENST00000587342 ERCC6L2Q5T890 1561 aa28.06■■■□□ 2.08
CXXC1-209ENST00000587342 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
CXXC1-209ENST00000587342 KIF27Q86VH2 1401 aa28.01■■■□□ 2.07
CXXC1-209ENST00000587342 IGF1RP08069 1367 aa27.98■■■□□ 2.07
CXXC1-209ENST00000587342 RUSC2Q8N2Y8 1516 aa27.94■■■□□ 2.06
CXXC1-209ENST00000587342 CUL7Q14999 1698 aa27.92■■■□□ 2.06
CXXC1-209ENST00000587342 PRG4Q92954 1404 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms