RNA–Protein interactions for RNA: ENST00000326009.9

DCAF11-201, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 1 (best)

Gene DCAF11, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-201ENST00000326009 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
DCAF11-201ENST00000326009 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
DCAF11-201ENST00000326009 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
DCAF11-201ENST00000326009 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
DCAF11-201ENST00000326009 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
DCAF11-201ENST00000326009 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
DCAF11-201ENST00000326009 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
DCAF11-201ENST00000326009 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
DCAF11-201ENST00000326009 HRCP23327 699 aa20.75■□□□□ 0.91
DCAF11-201ENST00000326009 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
DCAF11-201ENST00000326009 ABCC9O60706 1549 aa20.51■□□□□ 0.87
DCAF11-201ENST00000326009 PCGF6Q9BYE7 350 aa20.35■□□□□ 0.85
DCAF11-201ENST00000326009 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
DCAF11-201ENST00000326009 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
DCAF11-201ENST00000326009 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
DCAF11-201ENST00000326009 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
DCAF11-201ENST00000326009 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
DCAF11-201ENST00000326009 NACADO15069 1562 aa20.07■□□□□ 0.8
DCAF11-201ENST00000326009 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
DCAF11-201ENST00000326009 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
DCAF11-201ENST00000326009 PPARGC1BQ86YN6 1023 aaKnown RBP19.89■□□□□ 0.77
DCAF11-201ENST00000326009 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
DCAF11-201ENST00000326009 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
DCAF11-201ENST00000326009 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
DCAF11-201ENST00000326009 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
DCAF11-201ENST00000326009 WIZO95785 1651 aa19.63■□□□□ 0.73
DCAF11-201ENST00000326009 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.72
DCAF11-201ENST00000326009 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
DCAF11-201ENST00000326009 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
DCAF11-201ENST00000326009 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
DCAF11-201ENST00000326009 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
DCAF11-201ENST00000326009 EEA1Q15075 1411 aa19.4■□□□□ 0.7
DCAF11-201ENST00000326009 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
DCAF11-201ENST00000326009 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
DCAF11-201ENST00000326009 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.67
DCAF11-201ENST00000326009 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
DCAF11-201ENST00000326009 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
DCAF11-201ENST00000326009 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
DCAF11-201ENST00000326009 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
DCAF11-201ENST00000326009 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
DCAF11-201ENST00000326009 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
DCAF11-201ENST00000326009 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
DCAF11-201ENST00000326009 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
DCAF11-201ENST00000326009 KIF21BO75037 1637 aa19.06■□□□□ 0.64
DCAF11-201ENST00000326009 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
DCAF11-201ENST00000326009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
DCAF11-201ENST00000326009 SOGA1O94964 1423 aa19.03■□□□□ 0.64
DCAF11-201ENST00000326009 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
DCAF11-201ENST00000326009 CENPBP07199 599 aaPredicted RBP19■□□□□ 0.63
DCAF11-201ENST00000326009 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
DCAF11-201ENST00000326009 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
DCAF11-201ENST00000326009 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
DCAF11-201ENST00000326009 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
DCAF11-201ENST00000326009 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
DCAF11-201ENST00000326009 RUSC2Q8N2Y8 1516 aa18.87■□□□□ 0.61
DCAF11-201ENST00000326009 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
DCAF11-201ENST00000326009 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
DCAF11-201ENST00000326009 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
DCAF11-201ENST00000326009 CLIP1P30622 1438 aa18.79■□□□□ 0.6
DCAF11-201ENST00000326009 NEUROD1Q13562 356 aa18.79■□□□□ 0.6
DCAF11-201ENST00000326009 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
DCAF11-201ENST00000326009 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
DCAF11-201ENST00000326009 MYT1Q01538 1121 aa18.75■□□□□ 0.59
DCAF11-201ENST00000326009 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
DCAF11-201ENST00000326009 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
DCAF11-201ENST00000326009 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
DCAF11-201ENST00000326009 APLP2Q06481 763 aa18.67■□□□□ 0.58
DCAF11-201ENST00000326009 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
DCAF11-201ENST00000326009 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
DCAF11-201ENST00000326009 PRXQ9BXM0 1461 aa18.58■□□□□ 0.56
DCAF11-201ENST00000326009 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
DCAF11-201ENST00000326009 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
DCAF11-201ENST00000326009 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.563e-6■■■■□ 22
DCAF11-201ENST00000326009 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
DCAF11-201ENST00000326009 CUX2O14529 1486 aa18.48■□□□□ 0.55
DCAF11-201ENST00000326009 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
DCAF11-201ENST00000326009 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
DCAF11-201ENST00000326009 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
DCAF11-201ENST00000326009 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
DCAF11-201ENST00000326009 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
DCAF11-201ENST00000326009 MIER1Q8N108 512 aa18.41■□□□□ 0.54
DCAF11-201ENST00000326009 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
DCAF11-201ENST00000326009 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
DCAF11-201ENST00000326009 CUX1P39880 1505 aa18.38■□□□□ 0.53
DCAF11-201ENST00000326009 CFTRP13569 1480 aa18.35■□□□□ 0.53
DCAF11-201ENST00000326009 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
DCAF11-201ENST00000326009 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
DCAF11-201ENST00000326009 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
DCAF11-201ENST00000326009 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
DCAF11-201ENST00000326009 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
DCAF11-201ENST00000326009 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
DCAF11-201ENST00000326009 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
DCAF11-201ENST00000326009 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
DCAF11-201ENST00000326009 IGF1RP08069 1367 aa18.11■□□□□ 0.49
DCAF11-201ENST00000326009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.1■□□□□ 0.49
DCAF11-201ENST00000326009 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
DCAF11-201ENST00000326009 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
DCAF11-201ENST00000326009 SETD5Q9C0A6 1442 aa18.09■□□□□ 0.49
DCAF11-201ENST00000326009 MAPKBP1O60336 1514 aa18.08■□□□□ 0.48
DCAF11-201ENST00000326009 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 346.1 ms