RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 NISCHQ9Y2I1 1504 aa41.44■■■■■ 4.22
PHGDH-209ENST00000641074 CCDC180Q9P1Z9 1646 aa36.1■■■■□ 3.37
PHGDH-209ENST00000641074 ZCCHC6Q5VYS8 1495 aaKnown RBP34.8■■■■□ 3.16
PHGDH-209ENST00000641074 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
PHGDH-209ENST00000641074 ABCC9O60706 1549 aa34.24■■■■□ 3.07
PHGDH-209ENST00000641074 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
PHGDH-209ENST00000641074 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
PHGDH-209ENST00000641074 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
PHGDH-209ENST00000641074 NACADO15069 1562 aa33.66■■■□□ 2.98
PHGDH-209ENST00000641074 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
PHGDH-209ENST00000641074 SCRIBQ14160 1630 aa33.25■■■□□ 2.91
PHGDH-209ENST00000641074 UNC13AQ9UPW8 1703 aa32.72■■■□□ 2.83
PHGDH-209ENST00000641074 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
PHGDH-209ENST00000641074 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
PHGDH-209ENST00000641074 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
PHGDH-209ENST00000641074 CECR2Q9BXF3 1484 aa32.24■■■□□ 2.75
PHGDH-209ENST00000641074 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
PHGDH-209ENST00000641074 MROH2BQ7Z745 1585 aa32.03■■■□□ 2.72
PHGDH-209ENST00000641074 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
PHGDH-209ENST00000641074 SMARCA4P51532 1647 aa31.85■■■□□ 2.69
PHGDH-209ENST00000641074 WIZO95785 1651 aa31.77■■■□□ 2.68
PHGDH-209ENST00000641074 PEG3Q9GZU2 1588 aa31.46■■■□□ 2.63
PHGDH-209ENST00000641074 EIF4G1Q04637 1599 aaKnown RBP31.42■■■□□ 2.62
PHGDH-209ENST00000641074 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
PHGDH-209ENST00000641074 ATAD2BQ9ULI0 1458 aa31.36■■■□□ 2.61
PHGDH-209ENST00000641074 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
PHGDH-209ENST00000641074 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
PHGDH-209ENST00000641074 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
PHGDH-209ENST00000641074 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
PHGDH-209ENST00000641074 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
PHGDH-209ENST00000641074 HMGXB3Q12766 1538 aa31.01■■■□□ 2.56
PHGDH-209ENST00000641074 CC2D2AQ9P2K1 1620 aa30.97■■■□□ 2.55
PHGDH-209ENST00000641074 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
PHGDH-209ENST00000641074 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
PHGDH-209ENST00000641074 CFTRP13569 1480 aa30.39■■■□□ 2.46
PHGDH-209ENST00000641074 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
PHGDH-209ENST00000641074 DNAJC5BQ9UF47 199 aa30.28■■■□□ 2.44
PHGDH-209ENST00000641074 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
PHGDH-209ENST00000641074 PRDM2Q13029 1718 aa30.18■■■□□ 2.42
PHGDH-209ENST00000641074 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
PHGDH-209ENST00000641074 NESP48681 1621 aa30.06■■■□□ 2.4
PHGDH-209ENST00000641074 FAM9AQ8IZU1 332 aaPredicted RBP30.04■■■□□ 2.4
PHGDH-209ENST00000641074 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
PHGDH-209ENST00000641074 TOP2BQ02880 1626 aa30■■■□□ 2.39
PHGDH-209ENST00000641074 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
PHGDH-209ENST00000641074 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
PHGDH-209ENST00000641074 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.39
PHGDH-209ENST00000641074 CUX1P39880 1505 aa29.95■■■□□ 2.38
PHGDH-209ENST00000641074 SOGA1O94964 1423 aa29.89■■■□□ 2.38
PHGDH-209ENST00000641074 PDS5BQ9NTI5 1447 aa29.8■■■□□ 2.36
PHGDH-209ENST00000641074 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
PHGDH-209ENST00000641074 EEA1Q15075 1411 aa29.76■■■□□ 2.36
PHGDH-209ENST00000641074 CEP164Q9UPV0 1460 aa29.76■■■□□ 2.35
PHGDH-209ENST00000641074 KIF21AQ7Z4S6 1674 aa29.67■■■□□ 2.34
PHGDH-209ENST00000641074 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
PHGDH-209ENST00000641074 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
PHGDH-209ENST00000641074 EHMT2Q96KQ7 1210 aa29.64■■■□□ 2.34
PHGDH-209ENST00000641074 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
PHGDH-209ENST00000641074 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
PHGDH-209ENST00000641074 URB2Q14146 1524 aaKnown RBP29.6■■■□□ 2.33
PHGDH-209ENST00000641074 POLA1P09884 1462 aaPredicted RBP29.49■■■□□ 2.31
PHGDH-209ENST00000641074 KIF27Q86VH2 1401 aa29.48■■■□□ 2.31
PHGDH-209ENST00000641074 CUX2O14529 1486 aa29.43■■■□□ 2.3
PHGDH-209ENST00000641074 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
PHGDH-209ENST00000641074 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
PHGDH-209ENST00000641074 KIF21BO75037 1637 aa29.39■■■□□ 2.3
PHGDH-209ENST00000641074 GOLGA3Q08378 1498 aa29.38■■■□□ 2.29
PHGDH-209ENST00000641074 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
PHGDH-209ENST00000641074 ERCC6Q03468 1493 aa29.34■■■□□ 2.29
PHGDH-209ENST00000641074 TNIKQ9UKE5 1360 aa29.29■■■□□ 2.28
PHGDH-209ENST00000641074 PRXQ9BXM0 1461 aa29.28■■■□□ 2.28
PHGDH-209ENST00000641074 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
PHGDH-209ENST00000641074 RAPGEF2Q9Y4G8 1499 aa29.28■■■□□ 2.28
PHGDH-209ENST00000641074 WDR62O43379 1518 aa29.26■■■□□ 2.27
PHGDH-209ENST00000641074 IGF1RP08069 1367 aa29.25■■■□□ 2.27
PHGDH-209ENST00000641074 WDR97A6NE52 1622 aa29.24■■■□□ 2.27
PHGDH-209ENST00000641074 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.26
PHGDH-209ENST00000641074 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
PHGDH-209ENST00000641074 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
PHGDH-209ENST00000641074 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
PHGDH-209ENST00000641074 CEP162Q5TB80 1403 aa29.13■■■□□ 2.25
PHGDH-209ENST00000641074 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
PHGDH-209ENST00000641074 CARMIL1Q5VZK9 1371 aa29.09■■■□□ 2.25
PHGDH-209ENST00000641074 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
PHGDH-209ENST00000641074 IFT140Q96RY7 1462 aa29.05■■■□□ 2.24
PHGDH-209ENST00000641074 CUL7Q14999 1698 aa28.98■■■□□ 2.23
PHGDH-209ENST00000641074 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.231e-6■■□□□ 14.4
PHGDH-209ENST00000641074 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
PHGDH-209ENST00000641074 CLIP1P30622 1438 aa28.92■■■□□ 2.22
PHGDH-209ENST00000641074 PBRM1Q86U86 1689 aa28.88■■■□□ 2.21
PHGDH-209ENST00000641074 RANGAP1P46060 587 aaPredicted RBP28.85■■■□□ 2.21
PHGDH-209ENST00000641074 GRIN2BQ13224 1484 aa28.84■■■□□ 2.21
PHGDH-209ENST00000641074 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
PHGDH-209ENST00000641074 FHAD1B1AJZ9 1412 aa28.74■■■□□ 2.19
PHGDH-209ENST00000641074 ADAMTS12P58397 1594 aa28.73■■■□□ 2.19
PHGDH-209ENST00000641074 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
PHGDH-209ENST00000641074 VPS8Q8N3P4 1428 aa28.65■■■□□ 2.18
PHGDH-209ENST00000641074 CTTNBP2Q8WZ74 1663 aa28.65■■■□□ 2.18
PHGDH-209ENST00000641074 ARAP1Q96P48 1450 aa28.65■■■□□ 2.18
PHGDH-209ENST00000641074 ARHGAP35Q9NRY4 1499 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms