RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
SUMO1-207ENST00000409498 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
SUMO1-207ENST00000409498 ABCC9O60706 1549 aa30.62■■■□□ 2.49
SUMO1-207ENST00000409498 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
SUMO1-207ENST00000409498 NACADO15069 1562 aa29.69■■■□□ 2.34
SUMO1-207ENST00000409498 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
SUMO1-207ENST00000409498 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
SUMO1-207ENST00000409498 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
SUMO1-207ENST00000409498 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
SUMO1-207ENST00000409498 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.23
SUMO1-207ENST00000409498 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
SUMO1-207ENST00000409498 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
SUMO1-207ENST00000409498 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
SUMO1-207ENST00000409498 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
SUMO1-207ENST00000409498 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
SUMO1-207ENST00000409498 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
SUMO1-207ENST00000409498 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
SUMO1-207ENST00000409498 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
SUMO1-207ENST00000409498 BAZ1AQ9NRL2 1556 aaPredicted RBP27.62■■■□□ 2.01
SUMO1-207ENST00000409498 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
SUMO1-207ENST00000409498 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
SUMO1-207ENST00000409498 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
SUMO1-207ENST00000409498 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
SUMO1-207ENST00000409498 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
SUMO1-207ENST00000409498 SMARCA2P51531 1590 aa27.39■■□□□ 1.97
SUMO1-207ENST00000409498 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
SUMO1-207ENST00000409498 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
SUMO1-207ENST00000409498 WIZO95785 1651 aa27.15■■□□□ 1.94
SUMO1-207ENST00000409498 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
SUMO1-207ENST00000409498 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
SUMO1-207ENST00000409498 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
SUMO1-207ENST00000409498 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
SUMO1-207ENST00000409498 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
SUMO1-207ENST00000409498 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
SUMO1-207ENST00000409498 NESP48681 1621 aa26.57■■□□□ 1.84
SUMO1-207ENST00000409498 CFTRP13569 1480 aa26.49■■□□□ 1.83
SUMO1-207ENST00000409498 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
SUMO1-207ENST00000409498 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
SUMO1-207ENST00000409498 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
SUMO1-207ENST00000409498 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
SUMO1-207ENST00000409498 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
SUMO1-207ENST00000409498 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
SUMO1-207ENST00000409498 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
SUMO1-207ENST00000409498 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
SUMO1-207ENST00000409498 CUX2O14529 1486 aa26.1■■□□□ 1.77
SUMO1-207ENST00000409498 WDR62O43379 1518 aa26.04■■□□□ 1.76
SUMO1-207ENST00000409498 URB2Q14146 1524 aaKnown RBP25.97■■□□□ 1.75
SUMO1-207ENST00000409498 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
SUMO1-207ENST00000409498 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
SUMO1-207ENST00000409498 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
SUMO1-207ENST00000409498 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
SUMO1-207ENST00000409498 CUX1P39880 1505 aa25.73■■□□□ 1.71
SUMO1-207ENST00000409498 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
SUMO1-207ENST00000409498 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
SUMO1-207ENST00000409498 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
SUMO1-207ENST00000409498 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
SUMO1-207ENST00000409498 TOP2BQ02880 1626 aa25.6■■□□□ 1.69
SUMO1-207ENST00000409498 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
SUMO1-207ENST00000409498 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
SUMO1-207ENST00000409498 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
SUMO1-207ENST00000409498 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
SUMO1-207ENST00000409498 SOGA1O94964 1423 aa25.54■■□□□ 1.68
SUMO1-207ENST00000409498 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
SUMO1-207ENST00000409498 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
SUMO1-207ENST00000409498 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
SUMO1-207ENST00000409498 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
SUMO1-207ENST00000409498 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.65
SUMO1-207ENST00000409498 AQRO60306 1485 aaKnown RBP eCLIP25.36■■□□□ 1.65
SUMO1-207ENST00000409498 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
SUMO1-207ENST00000409498 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
SUMO1-207ENST00000409498 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
SUMO1-207ENST00000409498 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
SUMO1-207ENST00000409498 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
SUMO1-207ENST00000409498 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
SUMO1-207ENST00000409498 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
SUMO1-207ENST00000409498 SNAPC4Q5SXM2 1469 aa25.13■■□□□ 1.61
SUMO1-207ENST00000409498 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
SUMO1-207ENST00000409498 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
SUMO1-207ENST00000409498 SYNJ2O15056 1496 aa25.04■■□□□ 1.6
SUMO1-207ENST00000409498 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
SUMO1-207ENST00000409498 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
SUMO1-207ENST00000409498 CHD1O14646 1710 aa25.01■■□□□ 1.59
SUMO1-207ENST00000409498 IGF1RP08069 1367 aa25.01■■□□□ 1.59
SUMO1-207ENST00000409498 ADAMTS12P58397 1594 aa25■■□□□ 1.59
SUMO1-207ENST00000409498 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
SUMO1-207ENST00000409498 CHMP7Q8WUX9 453 aaPredicted RBP24.97■■□□□ 1.59
SUMO1-207ENST00000409498 FBLN2P98095 1184 aa24.93■■□□□ 1.58
SUMO1-207ENST00000409498 RUSC2Q8N2Y8 1516 aa24.92■■□□□ 1.58
SUMO1-207ENST00000409498 CUL7Q14999 1698 aa24.91■■□□□ 1.58
SUMO1-207ENST00000409498 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
SUMO1-207ENST00000409498 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
SUMO1-207ENST00000409498 NUP160Q12769 1436 aa24.82■■□□□ 1.56
SUMO1-207ENST00000409498 EEA1Q15075 1411 aa24.82■■□□□ 1.56
SUMO1-207ENST00000409498 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
SUMO1-207ENST00000409498 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
SUMO1-207ENST00000409498 PRXQ9BXM0 1461 aa24.72■■□□□ 1.55
SUMO1-207ENST00000409498 RAPGEF2Q9Y4G8 1499 aa24.72■■□□□ 1.55
SUMO1-207ENST00000409498 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
SUMO1-207ENST00000409498 KIAA0586Q9BVV6 1533 aa24.63■■□□□ 1.53
SUMO1-207ENST00000409498 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms