RNA–Protein interactions for RNA: ENST00000503170.1

RACK1-207, Transcript of receptor for activated C kinase 1, humanhuman

TSL 4

Gene RACK1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-207ENST00000503170 NISCHQ9Y2I1 1504 aa42.31■■■■■ 4.36
RACK1-207ENST00000503170 CCDC180Q9P1Z9 1646 aa38.08■■■■□ 3.69
RACK1-207ENST00000503170 ABCC9O60706 1549 aa38.01■■■■□ 3.67
RACK1-207ENST00000503170 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
RACK1-207ENST00000503170 NACADO15069 1562 aa35.91■■■■□ 3.34
RACK1-207ENST00000503170 DNAJC5BQ9UF47 199 aa35.74■■■■□ 3.31
RACK1-207ENST00000503170 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
RACK1-207ENST00000503170 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
RACK1-207ENST00000503170 MYO15BQ96JP2 1530 aa35.42■■■■□ 3.26
RACK1-207ENST00000503170 PABPN1Q86U42 306 aaKnown RBP eCLIP35.31■■■■□ 3.24
RACK1-207ENST00000503170 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
RACK1-207ENST00000503170 ZCCHC6Q5VYS8 1495 aaKnown RBP35.08■■■■□ 3.21
RACK1-207ENST00000503170 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
RACK1-207ENST00000503170 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
RACK1-207ENST00000503170 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
RACK1-207ENST00000503170 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
RACK1-207ENST00000503170 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
RACK1-207ENST00000503170 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
RACK1-207ENST00000503170 NCAPD3P42695 1498 aa33.14■■■□□ 2.9
RACK1-207ENST00000503170 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
RACK1-207ENST00000503170 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
RACK1-207ENST00000503170 HMGXB3Q12766 1538 aa32.93■■■□□ 2.86
RACK1-207ENST00000503170 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
RACK1-207ENST00000503170 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.84
RACK1-207ENST00000503170 CUX2O14529 1486 aa32.76■■■□□ 2.84
RACK1-207ENST00000503170 DNAJC5Q9H3Z4 198 aa32.76■■■□□ 2.83
RACK1-207ENST00000503170 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
RACK1-207ENST00000503170 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
RACK1-207ENST00000503170 NESP48681 1621 aa32.69■■■□□ 2.82
RACK1-207ENST00000503170 BAZ1BQ9UIG0 1483 aaKnown RBP32.68■■■□□ 2.82
RACK1-207ENST00000503170 MROH2BQ7Z745 1585 aa32.63■■■□□ 2.81
RACK1-207ENST00000503170 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.78
RACK1-207ENST00000503170 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
RACK1-207ENST00000503170 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
RACK1-207ENST00000503170 WIZO95785 1651 aa32.28■■■□□ 2.76
RACK1-207ENST00000503170 PDS5BQ9NTI5 1447 aa32.13■■■□□ 2.73
RACK1-207ENST00000503170 CADPSQ9ULU8 1353 aa32.08■■■□□ 2.73
RACK1-207ENST00000503170 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
RACK1-207ENST00000503170 WDR62O43379 1518 aa31.92■■■□□ 2.7
RACK1-207ENST00000503170 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
RACK1-207ENST00000503170 TOP2AP11388 1531 aaKnown RBP31.8■■■□□ 2.68
RACK1-207ENST00000503170 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
RACK1-207ENST00000503170 CFTRP13569 1480 aa31.77■■■□□ 2.68
RACK1-207ENST00000503170 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
RACK1-207ENST00000503170 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
RACK1-207ENST00000503170 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
RACK1-207ENST00000503170 CCDC88BA6NC98 1476 aa31.42■■■□□ 2.62
RACK1-207ENST00000503170 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
RACK1-207ENST00000503170 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
RACK1-207ENST00000503170 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
RACK1-207ENST00000503170 IFT140Q96RY7 1462 aa31.14■■■□□ 2.57
RACK1-207ENST00000503170 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
RACK1-207ENST00000503170 DNMBPQ6XZF7 1577 aa31.08■■■□□ 2.57
RACK1-207ENST00000503170 EIF4G3O43432 1585 aaKnown RBP31.04■■■□□ 2.56
RACK1-207ENST00000503170 ABCC8Q09428 1581 aa31.02■■■□□ 2.56
RACK1-207ENST00000503170 TARBP1Q13395 1621 aaKnown RBP31■■■□□ 2.55
RACK1-207ENST00000503170 RIMBP3CA6NJZ7 1639 aa30.96■■■□□ 2.55
RACK1-207ENST00000503170 RIMBP3BA6NNM3 1639 aa30.96■■■□□ 2.55
RACK1-207ENST00000503170 RIMBP3Q9UFD9 1639 aa30.96■■■□□ 2.55
RACK1-207ENST00000503170 CHD1O14646 1710 aa30.87■■■□□ 2.53
RACK1-207ENST00000503170 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
RACK1-207ENST00000503170 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.533e-31■■■■□ 22.5
RACK1-207ENST00000503170 ARHGEF11O15085 1522 aa30.8■■■□□ 2.52
RACK1-207ENST00000503170 RAD54L2Q9Y4B4 1467 aa30.74■■■□□ 2.51
RACK1-207ENST00000503170 CUX1P39880 1505 aa30.67■■■□□ 2.5
RACK1-207ENST00000503170 FGD5Q6ZNL6 1462 aa30.64■■■□□ 2.5
RACK1-207ENST00000503170 SOGA1O94964 1423 aa30.64■■■□□ 2.49
RACK1-207ENST00000503170 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
RACK1-207ENST00000503170 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
RACK1-207ENST00000503170 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
RACK1-207ENST00000503170 ARAP1Q96P48 1450 aa30.51■■■□□ 2.48
RACK1-207ENST00000503170 FBLN2P98095 1184 aa30.48■■■□□ 2.47
RACK1-207ENST00000503170 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
RACK1-207ENST00000503170 PBRM1Q86U86 1689 aa30.44■■■□□ 2.46
RACK1-207ENST00000503170 CYB5RLQ6IPT4 315 aa30.43■■■□□ 2.46
RACK1-207ENST00000503170 MAGI1Q96QZ7 1491 aaPredicted RBP30.43■■■□□ 2.46
RACK1-207ENST00000503170 GRIN2BQ13224 1484 aa30.4■■■□□ 2.46
RACK1-207ENST00000503170 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
RACK1-207ENST00000503170 ABCA5Q8WWZ7 1642 aa30.35■■■□□ 2.45
RACK1-207ENST00000503170 SYNJ2O15056 1496 aa30.32■■■□□ 2.44
RACK1-207ENST00000503170 ABCA10Q8WWZ4 1543 aa30.31■■■□□ 2.44
RACK1-207ENST00000503170 GAPVD1Q14C86 1478 aa30.3■■■□□ 2.44
RACK1-207ENST00000503170 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
RACK1-207ENST00000503170 CHMP7Q8WUX9 453 aaPredicted RBP30.26■■■□□ 2.43
RACK1-207ENST00000503170 BIVM-ERCC5R4GMW8 1640 aa30.21■■■□□ 2.43
RACK1-207ENST00000503170 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
RACK1-207ENST00000503170 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
RACK1-207ENST00000503170 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.4
RACK1-207ENST00000503170 GRIN2AQ12879 1464 aa30.05■■■□□ 2.4
RACK1-207ENST00000503170 TRHP20396 242 aaPredicted RBP30.04■■■□□ 2.4
RACK1-207ENST00000503170 CEP170Q5SW79 1584 aa30.02■■■□□ 2.4
RACK1-207ENST00000503170 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
RACK1-207ENST00000503170 NUP160Q12769 1436 aa29.96■■■□□ 2.39
RACK1-207ENST00000503170 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
RACK1-207ENST00000503170 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
RACK1-207ENST00000503170 FHAD1B1AJZ9 1412 aa29.88■■■□□ 2.37
RACK1-207ENST00000503170 RUSC2Q8N2Y8 1516 aa29.69■■■□□ 2.34
RACK1-207ENST00000503170 KIF13AQ9H1H9 1805 aa29.61■■■□□ 2.33
RACK1-207ENST00000503170 PRG4Q92954 1404 aaPredicted RBP29.61■■■□□ 2.33
RACK1-207ENST00000503170 JPH4Q96JJ6 628 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms