RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 NISCHQ9Y2I1 1504 aa49.41■■■■■ 5.5
SUMF1-201ENST00000272902 CCDC180Q9P1Z9 1646 aa42.94■■■■■ 4.46
SUMF1-201ENST00000272902 ZCCHC6Q5VYS8 1495 aaKnown RBP41.55■■■■■ 4.24
SUMF1-201ENST00000272902 DCAF8L2P0C7V8 631 aa40.89■■■■■ 4.14
SUMF1-201ENST00000272902 DCAF1Q9Y4B6 1507 aa40.75■■■■■ 4.11
SUMF1-201ENST00000272902 SHROOM4Q9ULL8 1493 aa40.65■■■■■ 4.1
SUMF1-201ENST00000272902 ABCC9O60706 1549 aa40.55■■■■■ 4.08
SUMF1-201ENST00000272902 MYO15BQ96JP2 1530 aa40.15■■■■■ 4.02
SUMF1-201ENST00000272902 NACADO15069 1562 aa39.91■■■■□ 3.98
SUMF1-201ENST00000272902 SCRIBQ14160 1630 aa39.67■■■■□ 3.94
SUMF1-201ENST00000272902 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
SUMF1-201ENST00000272902 SUPT5HO00267 1087 aaKnown RBP39.18■■■■□ 3.86
SUMF1-201ENST00000272902 UNC13AQ9UPW8 1703 aa38.95■■■■□ 3.83
SUMF1-201ENST00000272902 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
SUMF1-201ENST00000272902 BICRAQ9NZM4 1560 aa38.45■■■■□ 3.75
SUMF1-201ENST00000272902 RSF1Q96T23 1441 aaPredicted RBP38.45■■■■□ 3.75
SUMF1-201ENST00000272902 PABPN1Q86U42 306 aaKnown RBP eCLIP38.31■■■■□ 3.72
SUMF1-201ENST00000272902 MROH2BQ7Z745 1585 aa38.25■■■■□ 3.71
SUMF1-201ENST00000272902 BAZ1AQ9NRL2 1556 aaPredicted RBP38.11■■■■□ 3.69
SUMF1-201ENST00000272902 WIZO95785 1651 aa38■■■■□ 3.67
SUMF1-201ENST00000272902 SMARCA4P51532 1647 aa37.97■■■■□ 3.67
SUMF1-201ENST00000272902 CHIC1Q5VXU3 224 aa37.56■■■■□ 3.6
SUMF1-201ENST00000272902 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
SUMF1-201ENST00000272902 PEG3Q9GZU2 1588 aa37.42■■■■□ 3.58
SUMF1-201ENST00000272902 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.56
SUMF1-201ENST00000272902 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
SUMF1-201ENST00000272902 SMARCA2P51531 1590 aa37.2■■■■□ 3.55
SUMF1-201ENST00000272902 CCDC88BA6NC98 1476 aa37.16■■■■□ 3.54
SUMF1-201ENST00000272902 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
SUMF1-201ENST00000272902 NCAPD3P42695 1498 aa36.85■■■■□ 3.49
SUMF1-201ENST00000272902 HMGXB3Q12766 1538 aa36.83■■■■□ 3.49
SUMF1-201ENST00000272902 TRIM41Q8WV44 630 aa36.74■■■■□ 3.47
SUMF1-201ENST00000272902 CC2D2AQ9P2K1 1620 aa36.68■■■■□ 3.46
SUMF1-201ENST00000272902 ABCC8Q09428 1581 aa36.55■■■■□ 3.44
SUMF1-201ENST00000272902 LOC105371045A0A1W2PR82 267 aa36.23■■■■□ 3.39
SUMF1-201ENST00000272902 FAM9AQ8IZU1 332 aaPredicted RBP36.19■■■■□ 3.38
SUMF1-201ENST00000272902 WRNQ14191 1432 aaPredicted RBP eCLIP36.16■■■■□ 3.38
SUMF1-201ENST00000272902 CFTRP13569 1480 aa36.13■■■■□ 3.37
SUMF1-201ENST00000272902 SYNJ1O43426 1573 aa36.08■■■■□ 3.37
SUMF1-201ENST00000272902 PRDM2Q13029 1718 aa36.02■■■■□ 3.36
SUMF1-201ENST00000272902 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
SUMF1-201ENST00000272902 SOGA1O94964 1423 aa35.87■■■■□ 3.33
SUMF1-201ENST00000272902 TOP2BQ02880 1626 aa35.85■■■■□ 3.33
SUMF1-201ENST00000272902 DNAJC5BQ9UF47 199 aa35.82■■■■□ 3.32
SUMF1-201ENST00000272902 BIVM-ERCC5R4GMW8 1640 aa35.81■■■■□ 3.32
SUMF1-201ENST00000272902 EHMT2Q96KQ7 1210 aa35.78■■■■□ 3.32
SUMF1-201ENST00000272902 RUSC2Q8N2Y8 1516 aa35.76■■■■□ 3.31
SUMF1-201ENST00000272902 CUX1P39880 1505 aa35.74■■■■□ 3.31
SUMF1-201ENST00000272902 NESP48681 1621 aa35.7■■■■□ 3.31
SUMF1-201ENST00000272902 EEA1Q15075 1411 aa35.66■■■■□ 3.3
SUMF1-201ENST00000272902 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
SUMF1-201ENST00000272902 LAMC3Q9Y6N6 1575 aa35.58■■■■□ 3.29
SUMF1-201ENST00000272902 CSRNP3Q8WYN3 585 aa35.54■■■■□ 3.28
SUMF1-201ENST00000272902 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
SUMF1-201ENST00000272902 FGD5Q6ZNL6 1462 aa35.3■■■■□ 3.24
SUMF1-201ENST00000272902 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
SUMF1-201ENST00000272902 KIF21AQ7Z4S6 1674 aa35.28■■■■□ 3.24
SUMF1-201ENST00000272902 PDS5BQ9NTI5 1447 aa35.28■■■■□ 3.24
SUMF1-201ENST00000272902 KIF21BO75037 1637 aa35.27■■■■□ 3.24
SUMF1-201ENST00000272902 GOLGA3Q08378 1498 aa35.26■■■■□ 3.23
SUMF1-201ENST00000272902 TOPBP1Q92547 1522 aa35.24■■■■□ 3.23
SUMF1-201ENST00000272902 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
SUMF1-201ENST00000272902 TNIKQ9UKE5 1360 aa35.17■■■■□ 3.22
SUMF1-201ENST00000272902 URB2Q14146 1524 aaKnown RBP35.17■■■■□ 3.22
SUMF1-201ENST00000272902 UBTFP17480 764 aaKnown RBP35.16■■■■□ 3.22
SUMF1-201ENST00000272902 CUX2O14529 1486 aa35.11■■■■□ 3.21
SUMF1-201ENST00000272902 RAPGEF2Q9Y4G8 1499 aa35.11■■■■□ 3.21
SUMF1-201ENST00000272902 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
SUMF1-201ENST00000272902 CEP162Q5TB80 1403 aa35.07■■■■□ 3.2
SUMF1-201ENST00000272902 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
SUMF1-201ENST00000272902 PRXQ9BXM0 1461 aa35.03■■■■□ 3.2
SUMF1-201ENST00000272902 ERICH3Q5RHP9 1530 aa34.97■■■■□ 3.19
SUMF1-201ENST00000272902 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
SUMF1-201ENST00000272902 IGF1RP08069 1367 aa34.9■■■■□ 3.18
SUMF1-201ENST00000272902 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
SUMF1-201ENST00000272902 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
SUMF1-201ENST00000272902 PCGF6Q9BYE7 350 aa34.77■■■■□ 3.16
SUMF1-201ENST00000272902 CLIP1P30622 1438 aa34.73■■■■□ 3.15
SUMF1-201ENST00000272902 CARMIL1Q5VZK9 1371 aa34.72■■■■□ 3.15
SUMF1-201ENST00000272902 TARBP1Q13395 1621 aaKnown RBP34.71■■■■□ 3.15
SUMF1-201ENST00000272902 ERCC6Q03468 1493 aa34.69■■■■□ 3.14
SUMF1-201ENST00000272902 ABCA5Q8WWZ7 1642 aa34.68■■■■□ 3.14
SUMF1-201ENST00000272902 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
SUMF1-201ENST00000272902 WDR62O43379 1518 aa34.66■■■■□ 3.14
SUMF1-201ENST00000272902 RANGAP1P46060 587 aaPredicted RBP34.66■■■■□ 3.14
SUMF1-201ENST00000272902 TRIM26Q12899 539 aaPredicted RBP34.61■■■■□ 3.13
SUMF1-201ENST00000272902 CUL7Q14999 1698 aa34.59■■■■□ 3.13
SUMF1-201ENST00000272902 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
SUMF1-201ENST00000272902 PPARGC1BQ86YN6 1023 aaKnown RBP34.58■■■■□ 3.13
SUMF1-201ENST00000272902 THOC2Q8NI27 1593 aaKnown RBP34.56■■■■□ 3.12
SUMF1-201ENST00000272902 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
SUMF1-201ENST00000272902 VPS8Q8N3P4 1428 aa34.44■■■■□ 3.1
SUMF1-201ENST00000272902 IFT140Q96RY7 1462 aa34.43■■■■□ 3.1
SUMF1-201ENST00000272902 AQRO60306 1485 aaKnown RBP eCLIP34.42■■■■□ 3.1
SUMF1-201ENST00000272902 ARAP1Q96P48 1450 aa34.4■■■■□ 3.1
SUMF1-201ENST00000272902 ZNF608Q9ULD9 1512 aaPredicted RBP34.36■■■■□ 3.09
SUMF1-201ENST00000272902 ARHGAP35Q9NRY4 1499 aa34.35■■■■□ 3.09
SUMF1-201ENST00000272902 CTTNBP2Q8WZ74 1663 aa34.31■■■■□ 3.08
SUMF1-201ENST00000272902 TTBK1Q5TCY1 1321 aaPredicted RBP34.27■■■■□ 3.08
SUMF1-201ENST00000272902 GRIN2BQ13224 1484 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms