RNA–Protein interactions for RNA: ENST00000442011.6

TGFBI-201, Transcript of transforming growth factor beta induced, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBI, Length 2,804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBI-201ENST00000442011 NISCHQ9Y2I1 1504 aa23.52■■□□□ 1.36
TGFBI-201ENST00000442011 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.95
TGFBI-201ENST00000442011 HRCP23327 699 aa21■□□□□ 0.95
TGFBI-201ENST00000442011 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
TGFBI-201ENST00000442011 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
TGFBI-201ENST00000442011 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
TGFBI-201ENST00000442011 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.89
TGFBI-201ENST00000442011 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
TGFBI-201ENST00000442011 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
TGFBI-201ENST00000442011 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
TGFBI-201ENST00000442011 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
TGFBI-201ENST00000442011 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
TGFBI-201ENST00000442011 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
TGFBI-201ENST00000442011 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
TGFBI-201ENST00000442011 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
TGFBI-201ENST00000442011 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
TGFBI-201ENST00000442011 ZEB1P37275 1124 aaPredicted RBP19.75■□□□□ 0.75
TGFBI-201ENST00000442011 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
TGFBI-201ENST00000442011 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
TGFBI-201ENST00000442011 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
TGFBI-201ENST00000442011 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
TGFBI-201ENST00000442011 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
TGFBI-201ENST00000442011 MYT1Q01538 1121 aa19.29■□□□□ 0.68
TGFBI-201ENST00000442011 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
TGFBI-201ENST00000442011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
TGFBI-201ENST00000442011 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
TGFBI-201ENST00000442011 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
TGFBI-201ENST00000442011 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
TGFBI-201ENST00000442011 ABCC9O60706 1549 aa19■□□□□ 0.63
TGFBI-201ENST00000442011 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
TGFBI-201ENST00000442011 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
TGFBI-201ENST00000442011 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
TGFBI-201ENST00000442011 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
TGFBI-201ENST00000442011 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
TGFBI-201ENST00000442011 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
TGFBI-201ENST00000442011 MIER1Q8N108 512 aa18.64■□□□□ 0.58
TGFBI-201ENST00000442011 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
TGFBI-201ENST00000442011 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
TGFBI-201ENST00000442011 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
TGFBI-201ENST00000442011 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
TGFBI-201ENST00000442011 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
TGFBI-201ENST00000442011 WIZO95785 1651 aa18.37■□□□□ 0.53
TGFBI-201ENST00000442011 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
TGFBI-201ENST00000442011 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
TGFBI-201ENST00000442011 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
TGFBI-201ENST00000442011 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
TGFBI-201ENST00000442011 TNIKQ9UKE5 1360 aa18.29■□□□□ 0.52
TGFBI-201ENST00000442011 SOGA1O94964 1423 aa18.27■□□□□ 0.52
TGFBI-201ENST00000442011 ANP32EQ9BTT0 268 aa18.23■□□□□ 0.51
TGFBI-201ENST00000442011 TSHZ2Q9NRE2 1034 aa18.23■□□□□ 0.51
TGFBI-201ENST00000442011 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
TGFBI-201ENST00000442011 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
TGFBI-201ENST00000442011 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
TGFBI-201ENST00000442011 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
TGFBI-201ENST00000442011 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
TGFBI-201ENST00000442011 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
TGFBI-201ENST00000442011 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
TGFBI-201ENST00000442011 BCANQ96GW7 911 aa18.06■□□□□ 0.48
TGFBI-201ENST00000442011 APLP2Q06481 763 aa18.06■□□□□ 0.48
TGFBI-201ENST00000442011 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
TGFBI-201ENST00000442011 EEA1Q15075 1411 aa18.04■□□□□ 0.48
TGFBI-201ENST00000442011 NACADO15069 1562 aa18■□□□□ 0.47
TGFBI-201ENST00000442011 CLIP1P30622 1438 aa17.97■□□□□ 0.47
TGFBI-201ENST00000442011 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
TGFBI-201ENST00000442011 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
TGFBI-201ENST00000442011 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
TGFBI-201ENST00000442011 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
TGFBI-201ENST00000442011 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
TGFBI-201ENST00000442011 FKBP8Q14318 412 aa17.91■□□□□ 0.46
TGFBI-201ENST00000442011 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
TGFBI-201ENST00000442011 RBM19Q9Y4C8 960 aaKnown RBP17.82■□□□□ 0.44
TGFBI-201ENST00000442011 ITGAEP38570 1179 aa17.77■□□□□ 0.44
TGFBI-201ENST00000442011 SMARCA4P51532 1647 aa17.77■□□□□ 0.43
TGFBI-201ENST00000442011 KIF21BO75037 1637 aa17.76■□□□□ 0.43
TGFBI-201ENST00000442011 NEFLP07196 543 aa17.76■□□□□ 0.43
TGFBI-201ENST00000442011 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
TGFBI-201ENST00000442011 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
TGFBI-201ENST00000442011 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
TGFBI-201ENST00000442011 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
TGFBI-201ENST00000442011 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
TGFBI-201ENST00000442011 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
TGFBI-201ENST00000442011 MSH5O43196 834 aa17.64■□□□□ 0.41
TGFBI-201ENST00000442011 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
TGFBI-201ENST00000442011 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.4
TGFBI-201ENST00000442011 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
TGFBI-201ENST00000442011 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
TGFBI-201ENST00000442011 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
TGFBI-201ENST00000442011 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.4
TGFBI-201ENST00000442011 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.4
TGFBI-201ENST00000442011 ANP32CO43423 234 aa17.51■□□□□ 0.39
TGFBI-201ENST00000442011 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
TGFBI-201ENST00000442011 IRX6P78412 446 aaPredicted RBP17.5■□□□□ 0.39
TGFBI-201ENST00000442011 CUX2O14529 1486 aa17.49■□□□□ 0.39
TGFBI-201ENST00000442011 MAPKBP1O60336 1514 aa17.48■□□□□ 0.39
TGFBI-201ENST00000442011 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
TGFBI-201ENST00000442011 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
TGFBI-201ENST00000442011 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
TGFBI-201ENST00000442011 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
TGFBI-201ENST00000442011 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.383e-7■□□□□ 11.3
TGFBI-201ENST00000442011 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms