RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 NISCHQ9Y2I1 1504 aa46.15■■■■■ 4.98
PHGDH-210ENST00000641115 CCDC180Q9P1Z9 1646 aa40.63■■■■■ 4.09
PHGDH-210ENST00000641115 ABCC9O60706 1549 aa38.74■■■■□ 3.79
PHGDH-210ENST00000641115 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
PHGDH-210ENST00000641115 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
PHGDH-210ENST00000641115 DCAF8L2P0C7V8 631 aa38.17■■■■□ 3.7
PHGDH-210ENST00000641115 MYO15BQ96JP2 1530 aa37.99■■■■□ 3.67
PHGDH-210ENST00000641115 NACADO15069 1562 aa37.91■■■■□ 3.66
PHGDH-210ENST00000641115 RB1CC1Q8TDY2 1594 aa37.73■■■■□ 3.63
PHGDH-210ENST00000641115 SCRIBQ14160 1630 aa37.18■■■■□ 3.54
PHGDH-210ENST00000641115 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
PHGDH-210ENST00000641115 UNC13AQ9UPW8 1703 aa36.95■■■■□ 3.51
PHGDH-210ENST00000641115 BICRAQ9NZM4 1560 aa36.52■■■■□ 3.44
PHGDH-210ENST00000641115 PABPN1Q86U42 306 aaKnown RBP eCLIP36.34■■■■□ 3.41
PHGDH-210ENST00000641115 CECR2Q9BXF3 1484 aa35.82■■■■□ 3.33
PHGDH-210ENST00000641115 BAZ1AQ9NRL2 1556 aaPredicted RBP35.73■■■■□ 3.31
PHGDH-210ENST00000641115 SMARCA4P51532 1647 aa35.63■■■■□ 3.29
PHGDH-210ENST00000641115 MROH2BQ7Z745 1585 aa35.59■■■■□ 3.29
PHGDH-210ENST00000641115 RSF1Q96T23 1441 aaPredicted RBP35.54■■■■□ 3.28
PHGDH-210ENST00000641115 EIF4G1Q04637 1599 aaKnown RBP35.5■■■■□ 3.27
PHGDH-210ENST00000641115 SUPT5HO00267 1087 aaKnown RBP35.46■■■■□ 3.27
PHGDH-210ENST00000641115 WIZO95785 1651 aa35.31■■■■□ 3.24
PHGDH-210ENST00000641115 PEG3Q9GZU2 1588 aa35.23■■■■□ 3.23
PHGDH-210ENST00000641115 SMARCA2P51531 1590 aa35.17■■■■□ 3.22
PHGDH-210ENST00000641115 ATAD2BQ9ULI0 1458 aa35.13■■■■□ 3.21
PHGDH-210ENST00000641115 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
PHGDH-210ENST00000641115 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
PHGDH-210ENST00000641115 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
PHGDH-210ENST00000641115 NCAPD3P42695 1498 aa34.92■■■■□ 3.18
PHGDH-210ENST00000641115 HMGXB3Q12766 1538 aa34.91■■■■□ 3.18
PHGDH-210ENST00000641115 CCDC88BA6NC98 1476 aa34.53■■■■□ 3.12
PHGDH-210ENST00000641115 DNAJC5BQ9UF47 199 aa34.52■■■■□ 3.12
PHGDH-210ENST00000641115 CFTRP13569 1480 aa34.01■■■■□ 3.03
PHGDH-210ENST00000641115 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
PHGDH-210ENST00000641115 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
PHGDH-210ENST00000641115 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
PHGDH-210ENST00000641115 NESP48681 1621 aa33.82■■■■□ 3
PHGDH-210ENST00000641115 CHIC1Q5VXU3 224 aa33.65■■■□□ 2.98
PHGDH-210ENST00000641115 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
PHGDH-210ENST00000641115 FANCD2Q9BXW9 1451 aa33.62■■■□□ 2.97
PHGDH-210ENST00000641115 PDS5BQ9NTI5 1447 aa33.61■■■□□ 2.97
PHGDH-210ENST00000641115 KIF21AQ7Z4S6 1674 aa33.52■■■□□ 2.96
PHGDH-210ENST00000641115 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.96
PHGDH-210ENST00000641115 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
PHGDH-210ENST00000641115 TRIM41Q8WV44 630 aa33.44■■■□□ 2.94
PHGDH-210ENST00000641115 SYNJ1O43426 1573 aa33.4■■■□□ 2.94
PHGDH-210ENST00000641115 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
PHGDH-210ENST00000641115 BIVM-ERCC5R4GMW8 1640 aa33.35■■■□□ 2.93
PHGDH-210ENST00000641115 CUX1P39880 1505 aa33.34■■■□□ 2.93
PHGDH-210ENST00000641115 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
PHGDH-210ENST00000641115 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
PHGDH-210ENST00000641115 MRC2Q9UBG0 1479 aa33.22■■■□□ 2.91
PHGDH-210ENST00000641115 URB2Q14146 1524 aaKnown RBP33.21■■■□□ 2.91
PHGDH-210ENST00000641115 TOPBP1Q92547 1522 aa33.21■■■□□ 2.91
PHGDH-210ENST00000641115 THOC2Q8NI27 1593 aaKnown RBP33.11■■■□□ 2.89
PHGDH-210ENST00000641115 WDR62O43379 1518 aa33.08■■■□□ 2.89
PHGDH-210ENST00000641115 FGD5Q6ZNL6 1462 aa33.07■■■□□ 2.88
PHGDH-210ENST00000641115 POLA1P09884 1462 aaPredicted RBP32.99■■■□□ 2.87
PHGDH-210ENST00000641115 SOGA1O94964 1423 aa32.85■■■□□ 2.85
PHGDH-210ENST00000641115 RAD54L2Q9Y4B4 1467 aa32.83■■■□□ 2.85
PHGDH-210ENST00000641115 WDR97A6NE52 1622 aa32.79■■■□□ 2.84
PHGDH-210ENST00000641115 EEA1Q15075 1411 aa32.79■■■□□ 2.84
PHGDH-210ENST00000641115 ABCA10Q8WWZ4 1543 aa32.79■■■□□ 2.84
PHGDH-210ENST00000641115 CUX2O14529 1486 aa32.78■■■□□ 2.84
PHGDH-210ENST00000641115 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
PHGDH-210ENST00000641115 FAM9AQ8IZU1 332 aaPredicted RBP32.74■■■□□ 2.83
PHGDH-210ENST00000641115 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
PHGDH-210ENST00000641115 IFT140Q96RY7 1462 aa32.73■■■□□ 2.83
PHGDH-210ENST00000641115 KIF27Q86VH2 1401 aa32.73■■■□□ 2.83
PHGDH-210ENST00000641115 ABCA5Q8WWZ7 1642 aa32.6■■■□□ 2.81
PHGDH-210ENST00000641115 CSRNP3Q8WYN3 585 aa32.56■■■□□ 2.8
PHGDH-210ENST00000641115 TDRD9Q8NDG6 1382 aaKnown RBP32.55■■■□□ 2.8
PHGDH-210ENST00000641115 GAPVD1Q14C86 1478 aa32.51■■■□□ 2.8
PHGDH-210ENST00000641115 ZNF608Q9ULD9 1512 aaPredicted RBP32.5■■■□□ 2.79
PHGDH-210ENST00000641115 EIF4G3O43432 1585 aaKnown RBP32.48■■■□□ 2.79
PHGDH-210ENST00000641115 PBRM1Q86U86 1689 aa32.46■■■□□ 2.79
PHGDH-210ENST00000641115 AQRO60306 1485 aaKnown RBP eCLIP32.44■■■□□ 2.781e-6■■□□□ 14.4
PHGDH-210ENST00000641115 ERICH3Q5RHP9 1530 aa32.43■■■□□ 2.78
PHGDH-210ENST00000641115 KIF21BO75037 1637 aa32.41■■■□□ 2.78
PHGDH-210ENST00000641115 IGF1RP08069 1367 aa32.41■■■□□ 2.78
PHGDH-210ENST00000641115 CUL7Q14999 1698 aa32.38■■■□□ 2.77
PHGDH-210ENST00000641115 GRIN2BQ13224 1484 aa32.36■■■□□ 2.77
PHGDH-210ENST00000641115 PRXQ9BXM0 1461 aa32.34■■■□□ 2.77
PHGDH-210ENST00000641115 GOLGA3Q08378 1498 aa32.29■■■□□ 2.76
PHGDH-210ENST00000641115 LOC105371045A0A1W2PR82 267 aa32.29■■■□□ 2.76
PHGDH-210ENST00000641115 CARMIL1Q5VZK9 1371 aa32.27■■■□□ 2.76
PHGDH-210ENST00000641115 EHMT2Q96KQ7 1210 aa32.26■■■□□ 2.76
PHGDH-210ENST00000641115 RAPGEF2Q9Y4G8 1499 aa32.24■■■□□ 2.75
PHGDH-210ENST00000641115 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
PHGDH-210ENST00000641115 SNAPC4Q5SXM2 1469 aa32.2■■■□□ 2.74
PHGDH-210ENST00000641115 MAGI1Q96QZ7 1491 aaPredicted RBP32.18■■■□□ 2.74
PHGDH-210ENST00000641115 FHAD1B1AJZ9 1412 aa32.16■■■□□ 2.74
PHGDH-210ENST00000641115 UBTFP17480 764 aaKnown RBP32.11■■■□□ 2.73
PHGDH-210ENST00000641115 TNIKQ9UKE5 1360 aa32.04■■■□□ 2.72
PHGDH-210ENST00000641115 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
PHGDH-210ENST00000641115 CTTNBP2Q8WZ74 1663 aa31.96■■■□□ 2.71
PHGDH-210ENST00000641115 GRIN2AQ12879 1464 aa31.96■■■□□ 2.71
PHGDH-210ENST00000641115 CHMP7Q8WUX9 453 aaPredicted RBP31.93■■■□□ 2.7
PHGDH-210ENST00000641115 CHD1O14646 1710 aa31.89■■■□□ 2.7
PHGDH-210ENST00000641115 FBLN2P98095 1184 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms