RNA–Protein interactions for RNA: ENST00000448413.5

SUMF1-204, Transcript of sulfatase modifying factor 1, humanhuman

TSL 2

Gene SUMF1, Length 3,150 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-204ENST00000448413 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
SUMF1-204ENST00000448413 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
SUMF1-204ENST00000448413 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
SUMF1-204ENST00000448413 HRCP23327 699 aa24.26■■□□□ 1.47
SUMF1-204ENST00000448413 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
SUMF1-204ENST00000448413 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
SUMF1-204ENST00000448413 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.44
SUMF1-204ENST00000448413 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
SUMF1-204ENST00000448413 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
SUMF1-204ENST00000448413 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
SUMF1-204ENST00000448413 ABCC9O60706 1549 aa23.74■■□□□ 1.39
SUMF1-204ENST00000448413 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
SUMF1-204ENST00000448413 MYT1Q01538 1121 aa23.33■■□□□ 1.32
SUMF1-204ENST00000448413 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
SUMF1-204ENST00000448413 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
SUMF1-204ENST00000448413 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
SUMF1-204ENST00000448413 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
SUMF1-204ENST00000448413 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
SUMF1-204ENST00000448413 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.22
SUMF1-204ENST00000448413 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
SUMF1-204ENST00000448413 NACADO15069 1562 aa22.63■■□□□ 1.21
SUMF1-204ENST00000448413 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
SUMF1-204ENST00000448413 ACIN1Q9UKV3 1341 aaKnown RBP22.58■■□□□ 1.21
SUMF1-204ENST00000448413 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
SUMF1-204ENST00000448413 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
SUMF1-204ENST00000448413 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
SUMF1-204ENST00000448413 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
SUMF1-204ENST00000448413 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
SUMF1-204ENST00000448413 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
SUMF1-204ENST00000448413 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
SUMF1-204ENST00000448413 BCL11AQ9H165 835 aa22.23■■□□□ 1.15
SUMF1-204ENST00000448413 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
SUMF1-204ENST00000448413 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
SUMF1-204ENST00000448413 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
SUMF1-204ENST00000448413 WIZO95785 1651 aa22.04■■□□□ 1.12
SUMF1-204ENST00000448413 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
SUMF1-204ENST00000448413 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
SUMF1-204ENST00000448413 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
SUMF1-204ENST00000448413 TTBK1Q5TCY1 1321 aaPredicted RBP21.94■■□□□ 1.1
SUMF1-204ENST00000448413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
SUMF1-204ENST00000448413 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
SUMF1-204ENST00000448413 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
SUMF1-204ENST00000448413 PRKCSHP14314 528 aaPredicted RBP21.85■■□□□ 1.09
SUMF1-204ENST00000448413 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
SUMF1-204ENST00000448413 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
SUMF1-204ENST00000448413 ANP32EQ9BTT0 268 aa21.66■■□□□ 1.06
SUMF1-204ENST00000448413 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
SUMF1-204ENST00000448413 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
SUMF1-204ENST00000448413 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
SUMF1-204ENST00000448413 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
SUMF1-204ENST00000448413 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
SUMF1-204ENST00000448413 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
SUMF1-204ENST00000448413 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
SUMF1-204ENST00000448413 MIER1Q8N108 512 aa21.41■■□□□ 1.02
SUMF1-204ENST00000448413 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
SUMF1-204ENST00000448413 TSHZ2Q9NRE2 1034 aa21.33■■□□□ 1
SUMF1-204ENST00000448413 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
SUMF1-204ENST00000448413 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
SUMF1-204ENST00000448413 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
SUMF1-204ENST00000448413 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
SUMF1-204ENST00000448413 SUPT16HQ9Y5B9 1047 aaKnown RBP21.23■□□□□ 0.99
SUMF1-204ENST00000448413 SOGA1O94964 1423 aa21.22■□□□□ 0.99
SUMF1-204ENST00000448413 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
SUMF1-204ENST00000448413 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.97
SUMF1-204ENST00000448413 BCANQ96GW7 911 aa21.09■□□□□ 0.97
SUMF1-204ENST00000448413 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
SUMF1-204ENST00000448413 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
SUMF1-204ENST00000448413 ERICH6Q7L0X2 663 aa21.04■□□□□ 0.96
SUMF1-204ENST00000448413 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.95
SUMF1-204ENST00000448413 ANO8Q9HCE9 1232 aaPredicted RBP20.93■□□□□ 0.94
SUMF1-204ENST00000448413 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
SUMF1-204ENST00000448413 NESP48681 1621 aa20.85■□□□□ 0.93
SUMF1-204ENST00000448413 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
SUMF1-204ENST00000448413 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
SUMF1-204ENST00000448413 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
SUMF1-204ENST00000448413 APLP2Q06481 763 aa20.75■□□□□ 0.91
SUMF1-204ENST00000448413 CFTRP13569 1480 aa20.74■□□□□ 0.91
SUMF1-204ENST00000448413 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
SUMF1-204ENST00000448413 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
SUMF1-204ENST00000448413 ITGAEP38570 1179 aa20.71■□□□□ 0.91
SUMF1-204ENST00000448413 MSH5O43196 834 aa20.69■□□□□ 0.9
SUMF1-204ENST00000448413 FKBP8Q14318 412 aa20.69■□□□□ 0.9
SUMF1-204ENST00000448413 CCDC136Q96JN2 1154 aa20.69■□□□□ 0.9
SUMF1-204ENST00000448413 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
SUMF1-204ENST00000448413 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
SUMF1-204ENST00000448413 CUX1P39880 1505 aa20.67■□□□□ 0.9
SUMF1-204ENST00000448413 P3H3Q8IVL6 736 aa20.67■□□□□ 0.9
SUMF1-204ENST00000448413 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.9
SUMF1-204ENST00000448413 FANCD2Q9BXW9 1451 aa20.63■□□□□ 0.89
SUMF1-204ENST00000448413 GOLGA3Q08378 1498 aa20.61■□□□□ 0.89
SUMF1-204ENST00000448413 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
SUMF1-204ENST00000448413 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
SUMF1-204ENST00000448413 CUX2O14529 1486 aa20.59■□□□□ 0.89
SUMF1-204ENST00000448413 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
SUMF1-204ENST00000448413 EEA1Q15075 1411 aa20.59■□□□□ 0.89
SUMF1-204ENST00000448413 DEKP35659 375 aaKnown RBP20.56■□□□□ 0.88
SUMF1-204ENST00000448413 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
SUMF1-204ENST00000448413 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
SUMF1-204ENST00000448413 KIF27Q86VH2 1401 aa20.54■□□□□ 0.88
SUMF1-204ENST00000448413 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms