RNA–Protein interactions for RNA: ENST00000376817.8

RACK1-201, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5 BASIC

Gene RACK1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-201ENST00000376817 NISCHQ9Y2I1 1504 aa20.79■□□□□ 0.92
RACK1-201ENST00000376817 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
RACK1-201ENST00000376817 ABCC9O60706 1549 aa18.27■□□□□ 0.51
RACK1-201ENST00000376817 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
RACK1-201ENST00000376817 NACADO15069 1562 aa17.46■□□□□ 0.39
RACK1-201ENST00000376817 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
RACK1-201ENST00000376817 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
RACK1-201ENST00000376817 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
RACK1-201ENST00000376817 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
RACK1-201ENST00000376817 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
RACK1-201ENST00000376817 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
RACK1-201ENST00000376817 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
RACK1-201ENST00000376817 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
RACK1-201ENST00000376817 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
RACK1-201ENST00000376817 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
RACK1-201ENST00000376817 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
RACK1-201ENST00000376817 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
RACK1-201ENST00000376817 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
RACK1-201ENST00000376817 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
RACK1-201ENST00000376817 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
RACK1-201ENST00000376817 ATAD2BQ9ULI0 1458 aa16.11■□□□□ 0.17
RACK1-201ENST00000376817 BAZ1AQ9NRL2 1556 aaPredicted RBP16.1■□□□□ 0.17
RACK1-201ENST00000376817 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
RACK1-201ENST00000376817 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
RACK1-201ENST00000376817 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
RACK1-201ENST00000376817 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
RACK1-201ENST00000376817 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
RACK1-201ENST00000376817 WIZO95785 1651 aa15.88■□□□□ 0.13
RACK1-201ENST00000376817 NESP48681 1621 aa15.8■□□□□ 0.12
RACK1-201ENST00000376817 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
RACK1-201ENST00000376817 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
RACK1-201ENST00000376817 ERCC6Q03468 1493 aa15.71■□□□□ 0.1
RACK1-201ENST00000376817 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
RACK1-201ENST00000376817 KIF21AQ7Z4S6 1674 aa15.65■□□□□ 0.1
RACK1-201ENST00000376817 CUX2O14529 1486 aa15.64■□□□□ 0.09
RACK1-201ENST00000376817 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
RACK1-201ENST00000376817 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
RACK1-201ENST00000376817 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
RACK1-201ENST00000376817 CFTRP13569 1480 aa15.52■□□□□ 0.08
RACK1-201ENST00000376817 DNAJC5Q9H3Z4 198 aa15.51■□□□□ 0.07
RACK1-201ENST00000376817 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
RACK1-201ENST00000376817 PRDM2Q13029 1718 aa15.46■□□□□ 0.07
RACK1-201ENST00000376817 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
RACK1-201ENST00000376817 WDR62O43379 1518 aa15.44■□□□□ 0.06
RACK1-201ENST00000376817 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
RACK1-201ENST00000376817 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
RACK1-201ENST00000376817 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
RACK1-201ENST00000376817 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
RACK1-201ENST00000376817 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
RACK1-201ENST00000376817 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
RACK1-201ENST00000376817 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
RACK1-201ENST00000376817 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
RACK1-201ENST00000376817 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
RACK1-201ENST00000376817 TARBP1Q13395 1621 aaKnown RBP15.09■□□□□ 0.01
RACK1-201ENST00000376817 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
RACK1-201ENST00000376817 CUX1P39880 1505 aa15.05■□□□□ -0
RACK1-201ENST00000376817 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
RACK1-201ENST00000376817 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
RACK1-201ENST00000376817 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
RACK1-201ENST00000376817 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.013e-10■■■■■ 58.2
RACK1-201ENST00000376817 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
RACK1-201ENST00000376817 SOGA1O94964 1423 aa14.95□□□□□ -0.02
RACK1-201ENST00000376817 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
RACK1-201ENST00000376817 CHD1O14646 1710 aa14.91□□□□□ -0.02
RACK1-201ENST00000376817 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
RACK1-201ENST00000376817 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
RACK1-201ENST00000376817 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
RACK1-201ENST00000376817 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
RACK1-201ENST00000376817 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
RACK1-201ENST00000376817 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
RACK1-201ENST00000376817 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
RACK1-201ENST00000376817 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
RACK1-201ENST00000376817 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
RACK1-201ENST00000376817 GRIN2BQ13224 1484 aa14.81□□□□□ -0.04
RACK1-201ENST00000376817 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
RACK1-201ENST00000376817 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
RACK1-201ENST00000376817 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
RACK1-201ENST00000376817 MAGI1Q96QZ7 1491 aaPredicted RBP14.79□□□□□ -0.04
RACK1-201ENST00000376817 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
RACK1-201ENST00000376817 ARHGEF11O15085 1522 aa14.74□□□□□ -0.05
RACK1-201ENST00000376817 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
RACK1-201ENST00000376817 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
RACK1-201ENST00000376817 FBLN2P98095 1184 aa14.72□□□□□ -0.05
RACK1-201ENST00000376817 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
RACK1-201ENST00000376817 ADAMTS12P58397 1594 aa14.69□□□□□ -0.06
RACK1-201ENST00000376817 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
RACK1-201ENST00000376817 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
RACK1-201ENST00000376817 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
RACK1-201ENST00000376817 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
RACK1-201ENST00000376817 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
RACK1-201ENST00000376817 FHAD1B1AJZ9 1412 aa14.61□□□□□ -0.07
RACK1-201ENST00000376817 NUP160Q12769 1436 aa14.59□□□□□ -0.07
RACK1-201ENST00000376817 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
RACK1-201ENST00000376817 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
RACK1-201ENST00000376817 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
RACK1-201ENST00000376817 KIF27Q86VH2 1401 aa14.52□□□□□ -0.08
RACK1-201ENST00000376817 IGF1RP08069 1367 aa14.52□□□□□ -0.08
RACK1-201ENST00000376817 CUL7Q14999 1698 aa14.51□□□□□ -0.09
RACK1-201ENST00000376817 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
RACK1-201ENST00000376817 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms