RNA–Protein interactions for RNA: ENST00000507000.5

RACK1-214, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-214ENST00000507000 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
RACK1-214ENST00000507000 CCDC180Q9P1Z9 1646 aa15.77■□□□□ 0.12
RACK1-214ENST00000507000 ABCC9O60706 1549 aa15.44■□□□□ 0.06
RACK1-214ENST00000507000 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
RACK1-214ENST00000507000 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
RACK1-214ENST00000507000 NACADO15069 1562 aa14.78□□□□□ -0.04
RACK1-214ENST00000507000 ZCCHC6Q5VYS8 1495 aaKnown RBP14.73□□□□□ -0.05
RACK1-214ENST00000507000 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.06
RACK1-214ENST00000507000 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
RACK1-214ENST00000507000 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
RACK1-214ENST00000507000 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
RACK1-214ENST00000507000 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
RACK1-214ENST00000507000 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
RACK1-214ENST00000507000 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
RACK1-214ENST00000507000 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
RACK1-214ENST00000507000 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
RACK1-214ENST00000507000 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
RACK1-214ENST00000507000 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
RACK1-214ENST00000507000 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.16
RACK1-214ENST00000507000 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
RACK1-214ENST00000507000 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
RACK1-214ENST00000507000 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
RACK1-214ENST00000507000 ATAD2BQ9ULI0 1458 aa13.66□□□□□ -0.22
RACK1-214ENST00000507000 PEG3Q9GZU2 1588 aa13.65□□□□□ -0.22
RACK1-214ENST00000507000 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
RACK1-214ENST00000507000 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
RACK1-214ENST00000507000 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
RACK1-214ENST00000507000 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
RACK1-214ENST00000507000 WIZO95785 1651 aa13.49□□□□□ -0.25
RACK1-214ENST00000507000 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
RACK1-214ENST00000507000 NESP48681 1621 aa13.41□□□□□ -0.26
RACK1-214ENST00000507000 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
RACK1-214ENST00000507000 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
RACK1-214ENST00000507000 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
RACK1-214ENST00000507000 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
RACK1-214ENST00000507000 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
RACK1-214ENST00000507000 ERCC6Q03468 1493 aa13.21□□□□□ -0.3
RACK1-214ENST00000507000 CUX2O14529 1486 aa13.2□□□□□ -0.3
RACK1-214ENST00000507000 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
RACK1-214ENST00000507000 CFTRP13569 1480 aa13.16□□□□□ -0.3
RACK1-214ENST00000507000 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
RACK1-214ENST00000507000 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
RACK1-214ENST00000507000 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
RACK1-214ENST00000507000 WDR62O43379 1518 aa13.1□□□□□ -0.31
RACK1-214ENST00000507000 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
RACK1-214ENST00000507000 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
RACK1-214ENST00000507000 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
RACK1-214ENST00000507000 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
RACK1-214ENST00000507000 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
RACK1-214ENST00000507000 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
RACK1-214ENST00000507000 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
RACK1-214ENST00000507000 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
RACK1-214ENST00000507000 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
RACK1-214ENST00000507000 SENP3Q9H4L4 574 aaPredicted RBP12.8□□□□□ -0.36
RACK1-214ENST00000507000 CUX1P39880 1505 aa12.79□□□□□ -0.36
RACK1-214ENST00000507000 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
RACK1-214ENST00000507000 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
RACK1-214ENST00000507000 IFT140Q96RY7 1462 aa12.77□□□□□ -0.37
RACK1-214ENST00000507000 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.37
RACK1-214ENST00000507000 ABCC8Q09428 1581 aa12.77□□□□□ -0.37
RACK1-214ENST00000507000 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
RACK1-214ENST00000507000 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
RACK1-214ENST00000507000 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
RACK1-214ENST00000507000 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
RACK1-214ENST00000507000 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
RACK1-214ENST00000507000 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.381e-12■■■■■ 75.3
RACK1-214ENST00000507000 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
RACK1-214ENST00000507000 CHD1O14646 1710 aa12.64□□□□□ -0.39
RACK1-214ENST00000507000 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
RACK1-214ENST00000507000 SOGA1O94964 1423 aa12.62□□□□□ -0.39
RACK1-214ENST00000507000 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
RACK1-214ENST00000507000 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
RACK1-214ENST00000507000 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
RACK1-214ENST00000507000 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
RACK1-214ENST00000507000 WRNQ14191 1432 aaPredicted RBP eCLIP12.57□□□□□ -0.4
RACK1-214ENST00000507000 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
RACK1-214ENST00000507000 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
RACK1-214ENST00000507000 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.41
RACK1-214ENST00000507000 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
RACK1-214ENST00000507000 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
RACK1-214ENST00000507000 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
RACK1-214ENST00000507000 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
RACK1-214ENST00000507000 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
RACK1-214ENST00000507000 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
RACK1-214ENST00000507000 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
RACK1-214ENST00000507000 ARHGEF11O15085 1522 aa12.48□□□□□ -0.41
RACK1-214ENST00000507000 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
RACK1-214ENST00000507000 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
RACK1-214ENST00000507000 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
RACK1-214ENST00000507000 GRIN2AQ12879 1464 aa12.4□□□□□ -0.42
RACK1-214ENST00000507000 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
RACK1-214ENST00000507000 NUP160Q12769 1436 aa12.38□□□□□ -0.43
RACK1-214ENST00000507000 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
RACK1-214ENST00000507000 SHROOM2Q13796 1616 aa12.36□□□□□ -0.43
RACK1-214ENST00000507000 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
RACK1-214ENST00000507000 FBLN2P98095 1184 aa12.34□□□□□ -0.43
RACK1-214ENST00000507000 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
RACK1-214ENST00000507000 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
RACK1-214ENST00000507000 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
RACK1-214ENST00000507000 IGF1RP08069 1367 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms