RNA–Protein interactions for RNA: ENST00000503494.5

RACK1-208, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-208ENST00000503494 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
RACK1-208ENST00000503494 ABCC9O60706 1549 aa21.08■□□□□ 0.96
RACK1-208ENST00000503494 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
RACK1-208ENST00000503494 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
RACK1-208ENST00000503494 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
RACK1-208ENST00000503494 NACADO15069 1562 aa19.81■□□□□ 0.76
RACK1-208ENST00000503494 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
RACK1-208ENST00000503494 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
RACK1-208ENST00000503494 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
RACK1-208ENST00000503494 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
RACK1-208ENST00000503494 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
RACK1-208ENST00000503494 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
RACK1-208ENST00000503494 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
RACK1-208ENST00000503494 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
RACK1-208ENST00000503494 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
RACK1-208ENST00000503494 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
RACK1-208ENST00000503494 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
RACK1-208ENST00000503494 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
RACK1-208ENST00000503494 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
RACK1-208ENST00000503494 CUX2O14529 1486 aa18.4■□□□□ 0.54
RACK1-208ENST00000503494 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
RACK1-208ENST00000503494 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
RACK1-208ENST00000503494 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
RACK1-208ENST00000503494 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
RACK1-208ENST00000503494 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
RACK1-208ENST00000503494 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
RACK1-208ENST00000503494 NESP48681 1621 aa18■□□□□ 0.47
RACK1-208ENST00000503494 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.46
RACK1-208ENST00000503494 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
RACK1-208ENST00000503494 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
RACK1-208ENST00000503494 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
RACK1-208ENST00000503494 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
RACK1-208ENST00000503494 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
RACK1-208ENST00000503494 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
RACK1-208ENST00000503494 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
RACK1-208ENST00000503494 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
RACK1-208ENST00000503494 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
RACK1-208ENST00000503494 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
RACK1-208ENST00000503494 WDR62O43379 1518 aa17.65■□□□□ 0.42
RACK1-208ENST00000503494 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
RACK1-208ENST00000503494 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
RACK1-208ENST00000503494 WIZO95785 1651 aa17.46■□□□□ 0.39
RACK1-208ENST00000503494 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
RACK1-208ENST00000503494 CFTRP13569 1480 aa17.42■□□□□ 0.38
RACK1-208ENST00000503494 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.37
RACK1-208ENST00000503494 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
RACK1-208ENST00000503494 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
RACK1-208ENST00000503494 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
RACK1-208ENST00000503494 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
RACK1-208ENST00000503494 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
RACK1-208ENST00000503494 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
RACK1-208ENST00000503494 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
RACK1-208ENST00000503494 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
RACK1-208ENST00000503494 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
RACK1-208ENST00000503494 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
RACK1-208ENST00000503494 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
RACK1-208ENST00000503494 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
RACK1-208ENST00000503494 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
RACK1-208ENST00000503494 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
RACK1-208ENST00000503494 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
RACK1-208ENST00000503494 CHD1O14646 1710 aa17■□□□□ 0.31
RACK1-208ENST00000503494 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
RACK1-208ENST00000503494 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
RACK1-208ENST00000503494 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.31e-12■■■■■ 79.8
RACK1-208ENST00000503494 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
RACK1-208ENST00000503494 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
RACK1-208ENST00000503494 FBLN2P98095 1184 aa16.88■□□□□ 0.29
RACK1-208ENST00000503494 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
RACK1-208ENST00000503494 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
RACK1-208ENST00000503494 SOGA1O94964 1423 aa16.81■□□□□ 0.28
RACK1-208ENST00000503494 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
RACK1-208ENST00000503494 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
RACK1-208ENST00000503494 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
RACK1-208ENST00000503494 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
RACK1-208ENST00000503494 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
RACK1-208ENST00000503494 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
RACK1-208ENST00000503494 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
RACK1-208ENST00000503494 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
RACK1-208ENST00000503494 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
RACK1-208ENST00000503494 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
RACK1-208ENST00000503494 CUX1P39880 1505 aa16.66■□□□□ 0.26
RACK1-208ENST00000503494 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
RACK1-208ENST00000503494 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
RACK1-208ENST00000503494 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
RACK1-208ENST00000503494 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
RACK1-208ENST00000503494 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
RACK1-208ENST00000503494 NUP160Q12769 1436 aa16.48■□□□□ 0.23
RACK1-208ENST00000503494 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
RACK1-208ENST00000503494 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
RACK1-208ENST00000503494 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
RACK1-208ENST00000503494 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
RACK1-208ENST00000503494 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
RACK1-208ENST00000503494 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
RACK1-208ENST00000503494 KIF13AQ9H1H9 1805 aa16.39■□□□□ 0.21
RACK1-208ENST00000503494 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
RACK1-208ENST00000503494 BIVM-ERCC5R4GMW8 1640 aa16.35■□□□□ 0.21
RACK1-208ENST00000503494 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
RACK1-208ENST00000503494 PRG4Q92954 1404 aaPredicted RBP16.31■□□□□ 0.2
RACK1-208ENST00000503494 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
RACK1-208ENST00000503494 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms