RNA–Protein interactions for RNA: ENST00000303577.6

PCBP1-201, Transcript of poly(rC) binding protein 1, humanhuman

APPRIS P1 BASIC

Gene PCBP1, Length 1,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP1-201ENST00000303577 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
PCBP1-201ENST00000303577 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
PCBP1-201ENST00000303577 ABCC9O60706 1549 aa32.33■■■□□ 2.77
PCBP1-201ENST00000303577 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
PCBP1-201ENST00000303577 DCAF8L2P0C7V8 631 aa31.4■■■□□ 2.62
PCBP1-201ENST00000303577 NACADO15069 1562 aa31.22■■■□□ 2.59
PCBP1-201ENST00000303577 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
PCBP1-201ENST00000303577 DCAF1Q9Y4B6 1507 aa31.15■■■□□ 2.58
PCBP1-201ENST00000303577 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
PCBP1-201ENST00000303577 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
PCBP1-201ENST00000303577 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
PCBP1-201ENST00000303577 BICRAQ9NZM4 1560 aa30.31■■■□□ 2.44
PCBP1-201ENST00000303577 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
PCBP1-201ENST00000303577 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
PCBP1-201ENST00000303577 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
PCBP1-201ENST00000303577 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
PCBP1-201ENST00000303577 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
PCBP1-201ENST00000303577 CC2D2AQ9P2K1 1620 aa29.25■■■□□ 2.27
PCBP1-201ENST00000303577 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
PCBP1-201ENST00000303577 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.26
PCBP1-201ENST00000303577 MROH2BQ7Z745 1585 aa29.15■■■□□ 2.26
PCBP1-201ENST00000303577 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
PCBP1-201ENST00000303577 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
PCBP1-201ENST00000303577 WIZO95785 1651 aa28.89■■■□□ 2.22
PCBP1-201ENST00000303577 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
PCBP1-201ENST00000303577 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
PCBP1-201ENST00000303577 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
PCBP1-201ENST00000303577 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
PCBP1-201ENST00000303577 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
PCBP1-201ENST00000303577 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
PCBP1-201ENST00000303577 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
PCBP1-201ENST00000303577 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.11
PCBP1-201ENST00000303577 NESP48681 1621 aa28.12■■■□□ 2.09
PCBP1-201ENST00000303577 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
PCBP1-201ENST00000303577 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
PCBP1-201ENST00000303577 CFTRP13569 1480 aa27.92■■■□□ 2.06
PCBP1-201ENST00000303577 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
PCBP1-201ENST00000303577 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.04
PCBP1-201ENST00000303577 ERCC6Q03468 1493 aa27.78■■■□□ 2.04
PCBP1-201ENST00000303577 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
PCBP1-201ENST00000303577 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
PCBP1-201ENST00000303577 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
PCBP1-201ENST00000303577 THOC2Q8NI27 1593 aaKnown RBP27.58■■■□□ 2.01
PCBP1-201ENST00000303577 CHIC1Q5VXU3 224 aa27.58■■■□□ 2
PCBP1-201ENST00000303577 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
PCBP1-201ENST00000303577 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
PCBP1-201ENST00000303577 WDR62O43379 1518 aa27.42■■□□□ 1.98
PCBP1-201ENST00000303577 ABCC8Q09428 1581 aa27.39■■□□□ 1.97
PCBP1-201ENST00000303577 TOPBP1Q92547 1522 aa27.34■■□□□ 1.97
PCBP1-201ENST00000303577 DNMBPQ6XZF7 1577 aa27.33■■□□□ 1.97
PCBP1-201ENST00000303577 CUX1P39880 1505 aa27.32■■□□□ 1.96
PCBP1-201ENST00000303577 CUX2O14529 1486 aa27.26■■□□□ 1.96
PCBP1-201ENST00000303577 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
PCBP1-201ENST00000303577 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
PCBP1-201ENST00000303577 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
PCBP1-201ENST00000303577 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
PCBP1-201ENST00000303577 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
PCBP1-201ENST00000303577 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
PCBP1-201ENST00000303577 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
PCBP1-201ENST00000303577 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
PCBP1-201ENST00000303577 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
PCBP1-201ENST00000303577 IFT140Q96RY7 1462 aa27■■□□□ 1.91
PCBP1-201ENST00000303577 SOGA1O94964 1423 aa26.99■■□□□ 1.91
PCBP1-201ENST00000303577 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.9
PCBP1-201ENST00000303577 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
PCBP1-201ENST00000303577 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
PCBP1-201ENST00000303577 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
PCBP1-201ENST00000303577 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
PCBP1-201ENST00000303577 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.88
PCBP1-201ENST00000303577 ABCA5Q8WWZ7 1642 aa26.77■■□□□ 1.88
PCBP1-201ENST00000303577 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
PCBP1-201ENST00000303577 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.86
PCBP1-201ENST00000303577 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
PCBP1-201ENST00000303577 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
PCBP1-201ENST00000303577 KIF27Q86VH2 1401 aa26.61■■□□□ 1.85
PCBP1-201ENST00000303577 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
PCBP1-201ENST00000303577 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
PCBP1-201ENST00000303577 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
PCBP1-201ENST00000303577 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
PCBP1-201ENST00000303577 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
PCBP1-201ENST00000303577 CHD1O14646 1710 aa26.49■■□□□ 1.83
PCBP1-201ENST00000303577 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
PCBP1-201ENST00000303577 IGF1RP08069 1367 aa26.46■■□□□ 1.83
PCBP1-201ENST00000303577 FBLN2P98095 1184 aa26.41■■□□□ 1.82
PCBP1-201ENST00000303577 SYNJ2O15056 1496 aa26.4■■□□□ 1.82
PCBP1-201ENST00000303577 CUL7Q14999 1698 aa26.39■■□□□ 1.82
PCBP1-201ENST00000303577 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
PCBP1-201ENST00000303577 EEA1Q15075 1411 aa26.37■■□□□ 1.81
PCBP1-201ENST00000303577 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
PCBP1-201ENST00000303577 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
PCBP1-201ENST00000303577 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
PCBP1-201ENST00000303577 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
PCBP1-201ENST00000303577 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
PCBP1-201ENST00000303577 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
PCBP1-201ENST00000303577 PRXQ9BXM0 1461 aa26.21■■□□□ 1.79
PCBP1-201ENST00000303577 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.79
PCBP1-201ENST00000303577 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
PCBP1-201ENST00000303577 NUP160Q12769 1436 aa26.15■■□□□ 1.78
PCBP1-201ENST00000303577 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
PCBP1-201ENST00000303577 KIF21BO75037 1637 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms