RNA–Protein interactions for RNA: ENST00000559978.1

CD276-208, Transcript of CD276 molecule, humanhuman

TSL 2

Gene CD276, Length 503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD276-208ENST00000559978 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
CD276-208ENST00000559978 ABCC9O60706 1549 aa25.22■■□□□ 1.63
CD276-208ENST00000559978 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
CD276-208ENST00000559978 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
CD276-208ENST00000559978 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
CD276-208ENST00000559978 NACADO15069 1562 aa23.38■■□□□ 1.33
CD276-208ENST00000559978 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
CD276-208ENST00000559978 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
CD276-208ENST00000559978 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
CD276-208ENST00000559978 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
CD276-208ENST00000559978 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
CD276-208ENST00000559978 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
CD276-208ENST00000559978 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
CD276-208ENST00000559978 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
CD276-208ENST00000559978 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
CD276-208ENST00000559978 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
CD276-208ENST00000559978 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
CD276-208ENST00000559978 CUX2O14529 1486 aa22.18■■□□□ 1.14
CD276-208ENST00000559978 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
CD276-208ENST00000559978 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
CD276-208ENST00000559978 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
CD276-208ENST00000559978 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
CD276-208ENST00000559978 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
CD276-208ENST00000559978 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
CD276-208ENST00000559978 NESP48681 1621 aa21.4■■□□□ 1.02
CD276-208ENST00000559978 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
CD276-208ENST00000559978 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
CD276-208ENST00000559978 SMARCA2P51531 1590 aa21.31■■□□□ 1
CD276-208ENST00000559978 LAMC3Q9Y6N6 1575 aa21.27■□□□□ 0.99
CD276-208ENST00000559978 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
CD276-208ENST00000559978 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
CD276-208ENST00000559978 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
CD276-208ENST00000559978 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
CD276-208ENST00000559978 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
CD276-208ENST00000559978 MRC2Q9UBG0 1479 aa20.99■□□□□ 0.95
CD276-208ENST00000559978 WDR62O43379 1518 aa20.98■□□□□ 0.95
CD276-208ENST00000559978 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
CD276-208ENST00000559978 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
CD276-208ENST00000559978 RIMBP3CA6NJZ7 1639 aa20.84■□□□□ 0.93
CD276-208ENST00000559978 RIMBP3BA6NNM3 1639 aa20.84■□□□□ 0.93
CD276-208ENST00000559978 RIMBP3Q9UFD9 1639 aa20.84■□□□□ 0.93
CD276-208ENST00000559978 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
CD276-208ENST00000559978 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
CD276-208ENST00000559978 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
CD276-208ENST00000559978 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
CD276-208ENST00000559978 MROH2BQ7Z745 1585 aa20.62■□□□□ 0.89
CD276-208ENST00000559978 FANCD2Q9BXW9 1451 aa20.61■□□□□ 0.89
CD276-208ENST00000559978 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
CD276-208ENST00000559978 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
CD276-208ENST00000559978 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
CD276-208ENST00000559978 CFTRP13569 1480 aa20.41■□□□□ 0.86
CD276-208ENST00000559978 WIZO95785 1651 aa20.39■□□□□ 0.86
CD276-208ENST00000559978 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
CD276-208ENST00000559978 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
CD276-208ENST00000559978 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
CD276-208ENST00000559978 CHD1O14646 1710 aa20.34■□□□□ 0.85
CD276-208ENST00000559978 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
CD276-208ENST00000559978 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
CD276-208ENST00000559978 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
CD276-208ENST00000559978 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
CD276-208ENST00000559978 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
CD276-208ENST00000559978 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
CD276-208ENST00000559978 FBLN2P98095 1184 aa20.06■□□□□ 0.8
CD276-208ENST00000559978 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
CD276-208ENST00000559978 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
CD276-208ENST00000559978 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
CD276-208ENST00000559978 CLASP1Q7Z460 1538 aa20.01■□□□□ 0.79
CD276-208ENST00000559978 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
CD276-208ENST00000559978 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
CD276-208ENST00000559978 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
CD276-208ENST00000559978 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
CD276-208ENST00000559978 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
CD276-208ENST00000559978 MAGI1Q96QZ7 1491 aaPredicted RBP19.82■□□□□ 0.76
CD276-208ENST00000559978 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
CD276-208ENST00000559978 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
CD276-208ENST00000559978 ILDR1Q86SU0 546 aaPredicted RBP19.76■□□□□ 0.75
CD276-208ENST00000559978 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
CD276-208ENST00000559978 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
CD276-208ENST00000559978 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
CD276-208ENST00000559978 KIF13AQ9H1H9 1805 aa19.73■□□□□ 0.75
CD276-208ENST00000559978 SOGA1O94964 1423 aa19.72■□□□□ 0.75
CD276-208ENST00000559978 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
CD276-208ENST00000559978 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
CD276-208ENST00000559978 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
CD276-208ENST00000559978 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
CD276-208ENST00000559978 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
CD276-208ENST00000559978 KDM6BO15054 1643 aa19.47■□□□□ 0.71
CD276-208ENST00000559978 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
CD276-208ENST00000559978 KDM4FA0A1W2PPD8 638 aa19.46■□□□□ 0.71
CD276-208ENST00000559978 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
CD276-208ENST00000559978 GRIN2AQ12879 1464 aa19.45■□□□□ 0.7
CD276-208ENST00000559978 CUX1P39880 1505 aa19.45■□□□□ 0.7
CD276-208ENST00000559978 ABCC10Q5T3U5 1492 aa19.41■□□□□ 0.7
CD276-208ENST00000559978 NUP160Q12769 1436 aa19.39■□□□□ 0.69
CD276-208ENST00000559978 DIP2BQ9P265 1576 aa19.39■□□□□ 0.69
CD276-208ENST00000559978 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
CD276-208ENST00000559978 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
CD276-208ENST00000559978 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
CD276-208ENST00000559978 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
CD276-208ENST00000559978 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms