RNA–Protein interactions for RNA: ENST00000508682.5

RACK1-219, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-219ENST00000508682 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
RACK1-219ENST00000508682 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
RACK1-219ENST00000508682 ABCC9O60706 1549 aa21.36■■□□□ 1.01
RACK1-219ENST00000508682 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
RACK1-219ENST00000508682 DNAJC5Q9H3Z4 198 aa20.39■□□□□ 0.85
RACK1-219ENST00000508682 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
RACK1-219ENST00000508682 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
RACK1-219ENST00000508682 NACADO15069 1562 aa20.18■□□□□ 0.82
RACK1-219ENST00000508682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
RACK1-219ENST00000508682 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
RACK1-219ENST00000508682 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
RACK1-219ENST00000508682 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
RACK1-219ENST00000508682 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
RACK1-219ENST00000508682 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.77
RACK1-219ENST00000508682 SCRIBQ14160 1630 aa19.71■□□□□ 0.75
RACK1-219ENST00000508682 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
RACK1-219ENST00000508682 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
RACK1-219ENST00000508682 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
RACK1-219ENST00000508682 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
RACK1-219ENST00000508682 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
RACK1-219ENST00000508682 CUX2O14529 1486 aa18.78■□□□□ 0.6
RACK1-219ENST00000508682 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
RACK1-219ENST00000508682 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
RACK1-219ENST00000508682 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
RACK1-219ENST00000508682 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
RACK1-219ENST00000508682 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.58
RACK1-219ENST00000508682 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
RACK1-219ENST00000508682 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
RACK1-219ENST00000508682 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
RACK1-219ENST00000508682 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
RACK1-219ENST00000508682 NESP48681 1621 aa18.49■□□□□ 0.55
RACK1-219ENST00000508682 WIZO95785 1651 aa18.47■□□□□ 0.55
RACK1-219ENST00000508682 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
RACK1-219ENST00000508682 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
RACK1-219ENST00000508682 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
RACK1-219ENST00000508682 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
RACK1-219ENST00000508682 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
RACK1-219ENST00000508682 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
RACK1-219ENST00000508682 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
RACK1-219ENST00000508682 THOC2Q8NI27 1593 aaKnown RBP18.12■□□□□ 0.49
RACK1-219ENST00000508682 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
RACK1-219ENST00000508682 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
RACK1-219ENST00000508682 CFTRP13569 1480 aa18.01■□□□□ 0.47
RACK1-219ENST00000508682 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
RACK1-219ENST00000508682 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
RACK1-219ENST00000508682 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
RACK1-219ENST00000508682 WDR62O43379 1518 aa17.89■□□□□ 0.45
RACK1-219ENST00000508682 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
RACK1-219ENST00000508682 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
RACK1-219ENST00000508682 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
RACK1-219ENST00000508682 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
RACK1-219ENST00000508682 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
RACK1-219ENST00000508682 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
RACK1-219ENST00000508682 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
RACK1-219ENST00000508682 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
RACK1-219ENST00000508682 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
RACK1-219ENST00000508682 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
RACK1-219ENST00000508682 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
RACK1-219ENST00000508682 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.41
RACK1-219ENST00000508682 RAD54L2Q9Y4B4 1467 aa17.55■□□□□ 0.4
RACK1-219ENST00000508682 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
RACK1-219ENST00000508682 CUX1P39880 1505 aa17.53■□□□□ 0.4
RACK1-219ENST00000508682 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
RACK1-219ENST00000508682 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.393e-10■■■■■ 58.2
RACK1-219ENST00000508682 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
RACK1-219ENST00000508682 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
RACK1-219ENST00000508682 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
RACK1-219ENST00000508682 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
RACK1-219ENST00000508682 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
RACK1-219ENST00000508682 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
RACK1-219ENST00000508682 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
RACK1-219ENST00000508682 SOGA1O94964 1423 aa17.43■□□□□ 0.38
RACK1-219ENST00000508682 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
RACK1-219ENST00000508682 FBLN2P98095 1184 aa17.3■□□□□ 0.36
RACK1-219ENST00000508682 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
RACK1-219ENST00000508682 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
RACK1-219ENST00000508682 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
RACK1-219ENST00000508682 CHD1O14646 1710 aa17.27■□□□□ 0.36
RACK1-219ENST00000508682 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
RACK1-219ENST00000508682 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
RACK1-219ENST00000508682 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
RACK1-219ENST00000508682 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
RACK1-219ENST00000508682 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
RACK1-219ENST00000508682 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
RACK1-219ENST00000508682 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
RACK1-219ENST00000508682 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
RACK1-219ENST00000508682 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
RACK1-219ENST00000508682 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
RACK1-219ENST00000508682 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
RACK1-219ENST00000508682 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
RACK1-219ENST00000508682 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
RACK1-219ENST00000508682 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
RACK1-219ENST00000508682 CEP170Q5SW79 1584 aa17■□□□□ 0.31
RACK1-219ENST00000508682 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
RACK1-219ENST00000508682 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
RACK1-219ENST00000508682 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
RACK1-219ENST00000508682 NUP160Q12769 1436 aa16.95■□□□□ 0.3
RACK1-219ENST00000508682 IGF1RP08069 1367 aa16.94■□□□□ 0.3
RACK1-219ENST00000508682 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
RACK1-219ENST00000508682 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms