RNA–Protein interactions for RNA: ENST00000392245.5

SUMO1-202, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUMO1, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-202ENST00000392245 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
SUMO1-202ENST00000392245 AEBP2Q6ZN18 517 aaPredicted RBP30.4■■■□□ 2.46
SUMO1-202ENST00000392245 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
SUMO1-202ENST00000392245 ABCC9O60706 1549 aa28.33■■■□□ 2.13
SUMO1-202ENST00000392245 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
SUMO1-202ENST00000392245 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
SUMO1-202ENST00000392245 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
SUMO1-202ENST00000392245 NACADO15069 1562 aa26.3■■□□□ 1.8
SUMO1-202ENST00000392245 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
SUMO1-202ENST00000392245 UNC13AQ9UPW8 1703 aa26.18■■□□□ 1.78
SUMO1-202ENST00000392245 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
SUMO1-202ENST00000392245 SENP3Q9H4L4 574 aaPredicted RBP25.99■■□□□ 1.75
SUMO1-202ENST00000392245 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.75
SUMO1-202ENST00000392245 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
SUMO1-202ENST00000392245 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
SUMO1-202ENST00000392245 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
SUMO1-202ENST00000392245 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
SUMO1-202ENST00000392245 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
SUMO1-202ENST00000392245 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
SUMO1-202ENST00000392245 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
SUMO1-202ENST00000392245 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
SUMO1-202ENST00000392245 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
SUMO1-202ENST00000392245 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
SUMO1-202ENST00000392245 CUX2O14529 1486 aa24.57■■□□□ 1.52
SUMO1-202ENST00000392245 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
SUMO1-202ENST00000392245 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
SUMO1-202ENST00000392245 NESP48681 1621 aa24.18■■□□□ 1.46
SUMO1-202ENST00000392245 FOXD1Q16676 465 aa24.18■■□□□ 1.46
SUMO1-202ENST00000392245 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
SUMO1-202ENST00000392245 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
SUMO1-202ENST00000392245 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
SUMO1-202ENST00000392245 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
SUMO1-202ENST00000392245 SMARCA4P51532 1647 aa24■■□□□ 1.43
SUMO1-202ENST00000392245 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
SUMO1-202ENST00000392245 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
SUMO1-202ENST00000392245 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
SUMO1-202ENST00000392245 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
SUMO1-202ENST00000392245 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
SUMO1-202ENST00000392245 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
SUMO1-202ENST00000392245 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
SUMO1-202ENST00000392245 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
SUMO1-202ENST00000392245 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
SUMO1-202ENST00000392245 WDR62O43379 1518 aa23.53■■□□□ 1.36
SUMO1-202ENST00000392245 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
SUMO1-202ENST00000392245 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
SUMO1-202ENST00000392245 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
SUMO1-202ENST00000392245 WIZO95785 1651 aa23.32■■□□□ 1.32
SUMO1-202ENST00000392245 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
SUMO1-202ENST00000392245 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
SUMO1-202ENST00000392245 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
SUMO1-202ENST00000392245 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
SUMO1-202ENST00000392245 PLPPR3Q6T4P5 718 aa23.18■■□□□ 1.3
SUMO1-202ENST00000392245 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
SUMO1-202ENST00000392245 CFTRP13569 1480 aa23.13■■□□□ 1.29
SUMO1-202ENST00000392245 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
SUMO1-202ENST00000392245 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
SUMO1-202ENST00000392245 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
SUMO1-202ENST00000392245 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
SUMO1-202ENST00000392245 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
SUMO1-202ENST00000392245 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
SUMO1-202ENST00000392245 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
SUMO1-202ENST00000392245 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
SUMO1-202ENST00000392245 CHD1O14646 1710 aa22.81■■□□□ 1.24
SUMO1-202ENST00000392245 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
SUMO1-202ENST00000392245 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
SUMO1-202ENST00000392245 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
SUMO1-202ENST00000392245 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.22
SUMO1-202ENST00000392245 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
SUMO1-202ENST00000392245 MSH5O43196 834 aa22.66■■□□□ 1.22
SUMO1-202ENST00000392245 TARBP1Q13395 1621 aaKnown RBP22.65■■□□□ 1.22
SUMO1-202ENST00000392245 FBLN2P98095 1184 aa22.65■■□□□ 1.22
SUMO1-202ENST00000392245 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
SUMO1-202ENST00000392245 PIAS4Q8N2W9 510 aaPredicted RBP22.63■■□□□ 1.21
SUMO1-202ENST00000392245 PPP6R1Q9UPN7 881 aa22.63■■□□□ 1.21
SUMO1-202ENST00000392245 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
SUMO1-202ENST00000392245 ADRA2BP18089 450 aa22.57■■□□□ 1.2
SUMO1-202ENST00000392245 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
SUMO1-202ENST00000392245 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
SUMO1-202ENST00000392245 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
SUMO1-202ENST00000392245 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
SUMO1-202ENST00000392245 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
SUMO1-202ENST00000392245 SOGA1O94964 1423 aa22.39■■□□□ 1.17
SUMO1-202ENST00000392245 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
SUMO1-202ENST00000392245 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
SUMO1-202ENST00000392245 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
SUMO1-202ENST00000392245 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
SUMO1-202ENST00000392245 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
SUMO1-202ENST00000392245 POTEDQ86YR6 584 aa22.27■■□□□ 1.16
SUMO1-202ENST00000392245 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
SUMO1-202ENST00000392245 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
SUMO1-202ENST00000392245 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
SUMO1-202ENST00000392245 CUX1P39880 1505 aa22.2■■□□□ 1.14
SUMO1-202ENST00000392245 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
SUMO1-202ENST00000392245 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
SUMO1-202ENST00000392245 KIF13AQ9H1H9 1805 aa22.03■■□□□ 1.12
SUMO1-202ENST00000392245 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
SUMO1-202ENST00000392245 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
SUMO1-202ENST00000392245 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
SUMO1-202ENST00000392245 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
SUMO1-202ENST00000392245 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms