RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
RACK1-230ENST00000513060 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
RACK1-230ENST00000513060 ABCC9O60706 1549 aa27.01■■□□□ 1.91
RACK1-230ENST00000513060 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
RACK1-230ENST00000513060 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
RACK1-230ENST00000513060 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.81
RACK1-230ENST00000513060 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
RACK1-230ENST00000513060 NACADO15069 1562 aa26.26■■□□□ 1.79
RACK1-230ENST00000513060 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
RACK1-230ENST00000513060 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
RACK1-230ENST00000513060 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
RACK1-230ENST00000513060 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
RACK1-230ENST00000513060 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
RACK1-230ENST00000513060 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
RACK1-230ENST00000513060 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
RACK1-230ENST00000513060 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
RACK1-230ENST00000513060 EIF4G1Q04637 1599 aaKnown RBP24.64■■□□□ 1.53
RACK1-230ENST00000513060 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.53
RACK1-230ENST00000513060 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
RACK1-230ENST00000513060 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
RACK1-230ENST00000513060 SUPT5HO00267 1087 aaKnown RBP24.52■■□□□ 1.52
RACK1-230ENST00000513060 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
RACK1-230ENST00000513060 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
RACK1-230ENST00000513060 WIZO95785 1651 aa24.38■■□□□ 1.49
RACK1-230ENST00000513060 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
RACK1-230ENST00000513060 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
RACK1-230ENST00000513060 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
RACK1-230ENST00000513060 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
RACK1-230ENST00000513060 BAZ1BQ9UIG0 1483 aaKnown RBP24.2■■□□□ 1.46
RACK1-230ENST00000513060 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
RACK1-230ENST00000513060 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
RACK1-230ENST00000513060 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
RACK1-230ENST00000513060 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
RACK1-230ENST00000513060 CFTRP13569 1480 aa23.58■■□□□ 1.37
RACK1-230ENST00000513060 NESP48681 1621 aa23.54■■□□□ 1.36
RACK1-230ENST00000513060 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
RACK1-230ENST00000513060 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
RACK1-230ENST00000513060 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
RACK1-230ENST00000513060 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
RACK1-230ENST00000513060 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
RACK1-230ENST00000513060 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
RACK1-230ENST00000513060 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
RACK1-230ENST00000513060 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
RACK1-230ENST00000513060 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
RACK1-230ENST00000513060 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
RACK1-230ENST00000513060 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
RACK1-230ENST00000513060 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
RACK1-230ENST00000513060 CUX1P39880 1505 aa23.06■■□□□ 1.28
RACK1-230ENST00000513060 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
RACK1-230ENST00000513060 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
RACK1-230ENST00000513060 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
RACK1-230ENST00000513060 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
RACK1-230ENST00000513060 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
RACK1-230ENST00000513060 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
RACK1-230ENST00000513060 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
RACK1-230ENST00000513060 WDR62O43379 1518 aa22.94■■□□□ 1.26
RACK1-230ENST00000513060 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
RACK1-230ENST00000513060 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
RACK1-230ENST00000513060 SOGA1O94964 1423 aa22.82■■□□□ 1.24
RACK1-230ENST00000513060 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
RACK1-230ENST00000513060 CUX2O14529 1486 aa22.79■■□□□ 1.24
RACK1-230ENST00000513060 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
RACK1-230ENST00000513060 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
RACK1-230ENST00000513060 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
RACK1-230ENST00000513060 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
RACK1-230ENST00000513060 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
RACK1-230ENST00000513060 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
RACK1-230ENST00000513060 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
RACK1-230ENST00000513060 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
RACK1-230ENST00000513060 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
RACK1-230ENST00000513060 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.23e-10■■■■■ 58.2
RACK1-230ENST00000513060 EEA1Q15075 1411 aa22.56■■□□□ 1.2
RACK1-230ENST00000513060 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
RACK1-230ENST00000513060 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
RACK1-230ENST00000513060 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
RACK1-230ENST00000513060 IGF1RP08069 1367 aa22.5■■□□□ 1.19
RACK1-230ENST00000513060 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
RACK1-230ENST00000513060 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
RACK1-230ENST00000513060 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
RACK1-230ENST00000513060 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
RACK1-230ENST00000513060 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
RACK1-230ENST00000513060 EHMT2Q96KQ7 1210 aa22.35■■□□□ 1.17
RACK1-230ENST00000513060 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
RACK1-230ENST00000513060 PRXQ9BXM0 1461 aa22.33■■□□□ 1.17
RACK1-230ENST00000513060 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
RACK1-230ENST00000513060 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
RACK1-230ENST00000513060 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
RACK1-230ENST00000513060 CUL7Q14999 1698 aa22.28■■□□□ 1.16
RACK1-230ENST00000513060 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
RACK1-230ENST00000513060 FBLN2P98095 1184 aa22.26■■□□□ 1.15
RACK1-230ENST00000513060 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
RACK1-230ENST00000513060 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
RACK1-230ENST00000513060 KIF21BO75037 1637 aa22.24■■□□□ 1.15
RACK1-230ENST00000513060 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
RACK1-230ENST00000513060 GOLGA3Q08378 1498 aa22.21■■□□□ 1.15
RACK1-230ENST00000513060 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.15
RACK1-230ENST00000513060 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
RACK1-230ENST00000513060 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
RACK1-230ENST00000513060 CHD1O14646 1710 aa22.05■■□□□ 1.12
RACK1-230ENST00000513060 NUP160Q12769 1436 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms