RNA–Protein interactions for RNA: ENST00000452875.5

WDR6-208, Transcript of WD repeat domain 6, humanhuman

TSL 1 (best)

Gene WDR6, Length 3,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR6-208ENST00000452875 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
WDR6-208ENST00000452875 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
WDR6-208ENST00000452875 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
WDR6-208ENST00000452875 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
WDR6-208ENST00000452875 PCGF6Q9BYE7 350 aa18.75■□□□□ 0.59
WDR6-208ENST00000452875 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
WDR6-208ENST00000452875 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
WDR6-208ENST00000452875 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
WDR6-208ENST00000452875 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
WDR6-208ENST00000452875 HRCP23327 699 aa18.33■□□□□ 0.53
WDR6-208ENST00000452875 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
WDR6-208ENST00000452875 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
WDR6-208ENST00000452875 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
WDR6-208ENST00000452875 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
WDR6-208ENST00000452875 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
WDR6-208ENST00000452875 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.45
WDR6-208ENST00000452875 MYT1Q01538 1121 aa17.86■□□□□ 0.45
WDR6-208ENST00000452875 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
WDR6-208ENST00000452875 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
WDR6-208ENST00000452875 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
WDR6-208ENST00000452875 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
WDR6-208ENST00000452875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
WDR6-208ENST00000452875 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
WDR6-208ENST00000452875 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
WDR6-208ENST00000452875 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
WDR6-208ENST00000452875 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
WDR6-208ENST00000452875 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
WDR6-208ENST00000452875 APLP2Q06481 763 aa17.32■□□□□ 0.36
WDR6-208ENST00000452875 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
WDR6-208ENST00000452875 ABCC9O60706 1549 aa17.21■□□□□ 0.35
WDR6-208ENST00000452875 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
WDR6-208ENST00000452875 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
WDR6-208ENST00000452875 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
WDR6-208ENST00000452875 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
WDR6-208ENST00000452875 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
WDR6-208ENST00000452875 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
WDR6-208ENST00000452875 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
WDR6-208ENST00000452875 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.313e-12■■■■■ 48.6
WDR6-208ENST00000452875 ITGAEP38570 1179 aa16.93■□□□□ 0.3
WDR6-208ENST00000452875 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
WDR6-208ENST00000452875 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
WDR6-208ENST00000452875 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
WDR6-208ENST00000452875 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
WDR6-208ENST00000452875 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
WDR6-208ENST00000452875 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
WDR6-208ENST00000452875 MIER1Q8N108 512 aa16.63■□□□□ 0.25
WDR6-208ENST00000452875 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
WDR6-208ENST00000452875 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
WDR6-208ENST00000452875 BCANQ96GW7 911 aa16.53■□□□□ 0.24
WDR6-208ENST00000452875 SOGA1O94964 1423 aa16.53■□□□□ 0.24
WDR6-208ENST00000452875 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
WDR6-208ENST00000452875 WIZO95785 1651 aa16.47■□□□□ 0.23
WDR6-208ENST00000452875 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
WDR6-208ENST00000452875 NEFLP07196 543 aa16.46■□□□□ 0.23
WDR6-208ENST00000452875 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
WDR6-208ENST00000452875 FAM50AQ14320 339 aaKnown RBP16.46■□□□□ 0.23
WDR6-208ENST00000452875 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
WDR6-208ENST00000452875 CLIP1P30622 1438 aa16.4■□□□□ 0.22
WDR6-208ENST00000452875 P3H3Q8IVL6 736 aa16.39■□□□□ 0.22
WDR6-208ENST00000452875 NACADO15069 1562 aa16.37■□□□□ 0.21
WDR6-208ENST00000452875 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
WDR6-208ENST00000452875 GOLGA3Q08378 1498 aa16.33■□□□□ 0.21
WDR6-208ENST00000452875 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
WDR6-208ENST00000452875 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
WDR6-208ENST00000452875 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
WDR6-208ENST00000452875 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
WDR6-208ENST00000452875 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
WDR6-208ENST00000452875 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
WDR6-208ENST00000452875 EEA1Q15075 1411 aa16.24■□□□□ 0.19
WDR6-208ENST00000452875 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
WDR6-208ENST00000452875 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
WDR6-208ENST00000452875 FKBP8Q14318 412 aa16.19■□□□□ 0.18
WDR6-208ENST00000452875 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
WDR6-208ENST00000452875 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
WDR6-208ENST00000452875 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
WDR6-208ENST00000452875 ANP32CO43423 234 aa16.14■□□□□ 0.17
WDR6-208ENST00000452875 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
WDR6-208ENST00000452875 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.17
WDR6-208ENST00000452875 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
WDR6-208ENST00000452875 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
WDR6-208ENST00000452875 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
WDR6-208ENST00000452875 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
WDR6-208ENST00000452875 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
WDR6-208ENST00000452875 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
WDR6-208ENST00000452875 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
WDR6-208ENST00000452875 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
WDR6-208ENST00000452875 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
WDR6-208ENST00000452875 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.156e-7■■■□□ 14.8
WDR6-208ENST00000452875 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
WDR6-208ENST00000452875 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
WDR6-208ENST00000452875 TONSLQ96HA7 1378 aa15.94■□□□□ 0.14
WDR6-208ENST00000452875 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
WDR6-208ENST00000452875 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
WDR6-208ENST00000452875 DHX57Q6P158 1386 aaKnown RBP15.9■□□□□ 0.14
WDR6-208ENST00000452875 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
WDR6-208ENST00000452875 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
WDR6-208ENST00000452875 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
WDR6-208ENST00000452875 FAM9BQ8IZU0 186 aa15.87■□□□□ 0.13
WDR6-208ENST00000452875 RAB3GAP2Q9H2M9 1393 aa15.83■□□□□ 0.12
WDR6-208ENST00000452875 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms