RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
RECQL4-201ENST00000301323 CCDC180Q9P1Z9 1646 aa36.46■■■■□ 3.43
RECQL4-201ENST00000301323 ABCC9O60706 1549 aa35.88■■■■□ 3.33
RECQL4-201ENST00000301323 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
RECQL4-201ENST00000301323 NACADO15069 1562 aa34.29■■■■□ 3.08
RECQL4-201ENST00000301323 MYO15BQ96JP2 1530 aa34.03■■■■□ 3.04
RECQL4-201ENST00000301323 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
RECQL4-201ENST00000301323 DCAF8L2P0C7V8 631 aa33.94■■■■□ 3.02
RECQL4-201ENST00000301323 DCAF1Q9Y4B6 1507 aa33.76■■■■□ 3
RECQL4-201ENST00000301323 UNC13AQ9UPW8 1703 aa33.7■■■□□ 2.98
RECQL4-201ENST00000301323 BICRAQ9NZM4 1560 aa33.44■■■□□ 2.94
RECQL4-201ENST00000301323 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.943e-7■■■■■ 43
RECQL4-201ENST00000301323 DNAJC5BQ9UF47 199 aa33.36■■■□□ 2.93
RECQL4-201ENST00000301323 SCRIBQ14160 1630 aa33.2■■■□□ 2.9
RECQL4-201ENST00000301323 SHROOM4Q9ULL8 1493 aa33.06■■■□□ 2.88
RECQL4-201ENST00000301323 EIF4G1Q04637 1599 aaKnown RBP32.56■■■□□ 2.8
RECQL4-201ENST00000301323 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
RECQL4-201ENST00000301323 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
RECQL4-201ENST00000301323 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
RECQL4-201ENST00000301323 NCAPD3P42695 1498 aa31.63■■■□□ 2.65
RECQL4-201ENST00000301323 BAZ1AQ9NRL2 1556 aaPredicted RBP31.63■■■□□ 2.65
RECQL4-201ENST00000301323 ATAD2BQ9ULI0 1458 aa31.6■■■□□ 2.65
RECQL4-201ENST00000301323 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
RECQL4-201ENST00000301323 HMGXB3Q12766 1538 aa31.51■■■□□ 2.63
RECQL4-201ENST00000301323 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
RECQL4-201ENST00000301323 MROH2BQ7Z745 1585 aa31.42■■■□□ 2.62
RECQL4-201ENST00000301323 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
RECQL4-201ENST00000301323 WIZO95785 1651 aa31.06■■■□□ 2.56
RECQL4-201ENST00000301323 NESP48681 1621 aa30.98■■■□□ 2.55
RECQL4-201ENST00000301323 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
RECQL4-201ENST00000301323 RSF1Q96T23 1441 aaPredicted RBP30.92■■■□□ 2.54
RECQL4-201ENST00000301323 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
RECQL4-201ENST00000301323 CUX2O14529 1486 aa30.77■■■□□ 2.52
RECQL4-201ENST00000301323 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
RECQL4-201ENST00000301323 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
RECQL4-201ENST00000301323 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
RECQL4-201ENST00000301323 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
RECQL4-201ENST00000301323 DNAJC5Q9H3Z4 198 aa30.6■■■□□ 2.49
RECQL4-201ENST00000301323 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
RECQL4-201ENST00000301323 CFTRP13569 1480 aa30.45■■■□□ 2.47
RECQL4-201ENST00000301323 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
RECQL4-201ENST00000301323 WDR62O43379 1518 aa30.33■■■□□ 2.45
RECQL4-201ENST00000301323 FANCD2Q9BXW9 1451 aa30.33■■■□□ 2.45
RECQL4-201ENST00000301323 CEP164Q9UPV0 1460 aa30.33■■■□□ 2.45
RECQL4-201ENST00000301323 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
RECQL4-201ENST00000301323 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
RECQL4-201ENST00000301323 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
RECQL4-201ENST00000301323 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
RECQL4-201ENST00000301323 DNMBPQ6XZF7 1577 aa29.8■■■□□ 2.36
RECQL4-201ENST00000301323 ABCC8Q09428 1581 aa29.76■■■□□ 2.35
RECQL4-201ENST00000301323 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
RECQL4-201ENST00000301323 IFT140Q96RY7 1462 aa29.71■■■□□ 2.35
RECQL4-201ENST00000301323 ZNF608Q9ULD9 1512 aaPredicted RBP29.62■■■□□ 2.33
RECQL4-201ENST00000301323 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
RECQL4-201ENST00000301323 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
RECQL4-201ENST00000301323 EIF4G3O43432 1585 aaKnown RBP29.55■■■□□ 2.32
RECQL4-201ENST00000301323 CUX1P39880 1505 aa29.51■■■□□ 2.32
RECQL4-201ENST00000301323 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
RECQL4-201ENST00000301323 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
RECQL4-201ENST00000301323 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
RECQL4-201ENST00000301323 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.291e-6■■■■■ 33.8
RECQL4-201ENST00000301323 SOGA1O94964 1423 aa29.35■■■□□ 2.29
RECQL4-201ENST00000301323 WDR97A6NE52 1622 aa29.33■■■□□ 2.29
RECQL4-201ENST00000301323 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
RECQL4-201ENST00000301323 TDRD9Q8NDG6 1382 aaKnown RBP29.24■■■□□ 2.27
RECQL4-201ENST00000301323 CHD1O14646 1710 aa29.22■■■□□ 2.27
RECQL4-201ENST00000301323 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
RECQL4-201ENST00000301323 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
RECQL4-201ENST00000301323 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
RECQL4-201ENST00000301323 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
RECQL4-201ENST00000301323 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
RECQL4-201ENST00000301323 SNAPC4Q5SXM2 1469 aa29.13■■■□□ 2.25
RECQL4-201ENST00000301323 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
RECQL4-201ENST00000301323 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
RECQL4-201ENST00000301323 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
RECQL4-201ENST00000301323 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
RECQL4-201ENST00000301323 GAPVD1Q14C86 1478 aa29.05■■■□□ 2.24
RECQL4-201ENST00000301323 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
RECQL4-201ENST00000301323 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
RECQL4-201ENST00000301323 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
RECQL4-201ENST00000301323 ARHGEF11O15085 1522 aa28.98■■■□□ 2.23
RECQL4-201ENST00000301323 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
RECQL4-201ENST00000301323 FBLN2P98095 1184 aa28.95■■■□□ 2.22
RECQL4-201ENST00000301323 CLASP1Q7Z460 1538 aa28.92■■■□□ 2.22
RECQL4-201ENST00000301323 ADAMTS12P58397 1594 aa28.86■■■□□ 2.21
RECQL4-201ENST00000301323 CHMP7Q8WUX9 453 aaPredicted RBP28.85■■■□□ 2.21
RECQL4-201ENST00000301323 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
RECQL4-201ENST00000301323 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
RECQL4-201ENST00000301323 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
RECQL4-201ENST00000301323 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
RECQL4-201ENST00000301323 NUP160Q12769 1436 aa28.66■■■□□ 2.18
RECQL4-201ENST00000301323 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
RECQL4-201ENST00000301323 CYB5RLQ6IPT4 315 aa28.58■■■□□ 2.17
RECQL4-201ENST00000301323 KIF27Q86VH2 1401 aa28.53■■■□□ 2.16
RECQL4-201ENST00000301323 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
RECQL4-201ENST00000301323 CUL7Q14999 1698 aa28.48■■■□□ 2.15
RECQL4-201ENST00000301323 ERCC6L2Q5T890 1561 aa28.47■■■□□ 2.15
RECQL4-201ENST00000301323 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.15
RECQL4-201ENST00000301323 IGF1RP08069 1367 aa28.45■■■□□ 2.14
RECQL4-201ENST00000301323 TRHP20396 242 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms