RNA–Protein interactions for RNA: ENST00000540887.1

STIP1-210, Transcript of stress induced phosphoprotein 1, humanhuman

TSL 2

Gene STIP1, Length 877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1-210ENST00000540887 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
STIP1-210ENST00000540887 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
STIP1-210ENST00000540887 ABCC9O60706 1549 aa32.2■■■□□ 2.74
STIP1-210ENST00000540887 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
STIP1-210ENST00000540887 NACADO15069 1562 aa31.11■■■□□ 2.57
STIP1-210ENST00000540887 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
STIP1-210ENST00000540887 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
STIP1-210ENST00000540887 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
STIP1-210ENST00000540887 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.54
STIP1-210ENST00000540887 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
STIP1-210ENST00000540887 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
STIP1-210ENST00000540887 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.414e-11■■■■■ 40
STIP1-210ENST00000540887 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
STIP1-210ENST00000540887 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
STIP1-210ENST00000540887 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
STIP1-210ENST00000540887 EIF4G1Q04637 1599 aaKnown RBP29.31■■■□□ 2.28
STIP1-210ENST00000540887 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
STIP1-210ENST00000540887 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
STIP1-210ENST00000540887 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
STIP1-210ENST00000540887 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
STIP1-210ENST00000540887 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
STIP1-210ENST00000540887 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
STIP1-210ENST00000540887 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.18
STIP1-210ENST00000540887 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
STIP1-210ENST00000540887 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
STIP1-210ENST00000540887 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
STIP1-210ENST00000540887 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
STIP1-210ENST00000540887 RSF1Q96T23 1441 aaPredicted RBP28.45■■■□□ 2.15
STIP1-210ENST00000540887 WIZO95785 1651 aa28.42■■■□□ 2.14
STIP1-210ENST00000540887 TOP2AP11388 1531 aaKnown RBP28.16■■■□□ 2.1
STIP1-210ENST00000540887 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
STIP1-210ENST00000540887 NESP48681 1621 aa27.89■■■□□ 2.05
STIP1-210ENST00000540887 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
STIP1-210ENST00000540887 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
STIP1-210ENST00000540887 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
STIP1-210ENST00000540887 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
STIP1-210ENST00000540887 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
STIP1-210ENST00000540887 CFTRP13569 1480 aa27.71■■■□□ 2.03
STIP1-210ENST00000540887 KIF21AQ7Z4S6 1674 aa27.6■■■□□ 2.01
STIP1-210ENST00000540887 PRDM2Q13029 1718 aa27.56■■■□□ 2
STIP1-210ENST00000540887 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
STIP1-210ENST00000540887 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
STIP1-210ENST00000540887 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
STIP1-210ENST00000540887 CUX2O14529 1486 aa27.44■■□□□ 1.98
STIP1-210ENST00000540887 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
STIP1-210ENST00000540887 WDR62O43379 1518 aa27.31■■□□□ 1.96
STIP1-210ENST00000540887 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
STIP1-210ENST00000540887 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
STIP1-210ENST00000540887 DNMBPQ6XZF7 1577 aa27.1■■□□□ 1.93
STIP1-210ENST00000540887 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
STIP1-210ENST00000540887 CUX1P39880 1505 aa26.93■■□□□ 1.9
STIP1-210ENST00000540887 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
STIP1-210ENST00000540887 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
STIP1-210ENST00000540887 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
STIP1-210ENST00000540887 FGD5Q6ZNL6 1462 aa26.84■■□□□ 1.89
STIP1-210ENST00000540887 SOGA1O94964 1423 aa26.79■■□□□ 1.88
STIP1-210ENST00000540887 TOP2BQ02880 1626 aa26.78■■□□□ 1.88
STIP1-210ENST00000540887 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
STIP1-210ENST00000540887 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
STIP1-210ENST00000540887 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
STIP1-210ENST00000540887 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
STIP1-210ENST00000540887 ZNF608Q9ULD9 1512 aaPredicted RBP26.71■■□□□ 1.87
STIP1-210ENST00000540887 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
STIP1-210ENST00000540887 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
STIP1-210ENST00000540887 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
STIP1-210ENST00000540887 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.856e-7■■■■□ 22
STIP1-210ENST00000540887 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
STIP1-210ENST00000540887 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
STIP1-210ENST00000540887 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
STIP1-210ENST00000540887 GRIN2BQ13224 1484 aa26.47■■□□□ 1.83
STIP1-210ENST00000540887 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
STIP1-210ENST00000540887 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
STIP1-210ENST00000540887 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.82
STIP1-210ENST00000540887 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
STIP1-210ENST00000540887 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
STIP1-210ENST00000540887 OSCARQ8IYS5 282 aa26.35■■□□□ 1.81
STIP1-210ENST00000540887 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
STIP1-210ENST00000540887 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
STIP1-210ENST00000540887 FBLN2P98095 1184 aa26.3■■□□□ 1.8
STIP1-210ENST00000540887 CHD1O14646 1710 aa26.3■■□□□ 1.8
STIP1-210ENST00000540887 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
STIP1-210ENST00000540887 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
STIP1-210ENST00000540887 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
STIP1-210ENST00000540887 FHAD1B1AJZ9 1412 aa26.19■■□□□ 1.78
STIP1-210ENST00000540887 IGF1RP08069 1367 aa26.13■■□□□ 1.77
STIP1-210ENST00000540887 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
STIP1-210ENST00000540887 CUL7Q14999 1698 aa26.11■■□□□ 1.77
STIP1-210ENST00000540887 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
STIP1-210ENST00000540887 RUSC2Q8N2Y8 1516 aa26.03■■□□□ 1.76
STIP1-210ENST00000540887 CARMIL1Q5VZK9 1371 aa26.01■■□□□ 1.75
STIP1-210ENST00000540887 CLASP1Q7Z460 1538 aa25.99■■□□□ 1.75
STIP1-210ENST00000540887 NUP160Q12769 1436 aa25.98■■□□□ 1.75
STIP1-210ENST00000540887 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
STIP1-210ENST00000540887 EEA1Q15075 1411 aa25.94■■□□□ 1.74
STIP1-210ENST00000540887 RAPGEF2Q9Y4G8 1499 aa25.88■■□□□ 1.73
STIP1-210ENST00000540887 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
STIP1-210ENST00000540887 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
STIP1-210ENST00000540887 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
STIP1-210ENST00000540887 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
STIP1-210ENST00000540887 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms