RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 NISCHQ9Y2I1 1504 aa42.5■■■■■ 4.39
E2F1-201ENST00000343380 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.49
E2F1-201ENST00000343380 SUPT5HO00267 1087 aaKnown RBP36.29■■■■□ 3.4
E2F1-201ENST00000343380 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
E2F1-201ENST00000343380 CCDC180Q9P1Z9 1646 aa35.74■■■■□ 3.31
E2F1-201ENST00000343380 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
E2F1-201ENST00000343380 CHIC1Q5VXU3 224 aa35.43■■■■□ 3.26
E2F1-201ENST00000343380 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
E2F1-201ENST00000343380 HRCP23327 699 aa35.06■■■■□ 3.2
E2F1-201ENST00000343380 PCGF6Q9BYE7 350 aa34.83■■■■□ 3.17
E2F1-201ENST00000343380 DCAF1Q9Y4B6 1507 aa34.72■■■■□ 3.15
E2F1-201ENST00000343380 LOC105371045A0A1W2PR82 267 aa34.53■■■■□ 3.12
E2F1-201ENST00000343380 PPARGC1BQ86YN6 1023 aaKnown RBP34.46■■■■□ 3.11
E2F1-201ENST00000343380 ABCC9O60706 1549 aa34.05■■■■□ 3.04
E2F1-201ENST00000343380 TRIM26Q12899 539 aaPredicted RBP33.93■■■■□ 3.02
E2F1-201ENST00000343380 RSF1Q96T23 1441 aaPredicted RBP33.88■■■■□ 3.01
E2F1-201ENST00000343380 SCRIBQ14160 1630 aa33.82■■■■□ 3.01
E2F1-201ENST00000343380 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
E2F1-201ENST00000343380 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
E2F1-201ENST00000343380 FAM9AQ8IZU1 332 aaPredicted RBP33.55■■■□□ 2.96
E2F1-201ENST00000343380 EHMT2Q96KQ7 1210 aa33.37■■■□□ 2.93
E2F1-201ENST00000343380 CECR2Q9BXF3 1484 aa33.28■■■□□ 2.92
E2F1-201ENST00000343380 ZEB1P37275 1124 aaPredicted RBP33.25■■■□□ 2.91
E2F1-201ENST00000343380 MROH2BQ7Z745 1585 aa33.16■■■□□ 2.9
E2F1-201ENST00000343380 NACADO15069 1562 aa33.14■■■□□ 2.9
E2F1-201ENST00000343380 WIZO95785 1651 aa32.99■■■□□ 2.87
E2F1-201ENST00000343380 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.82
E2F1-201ENST00000343380 EIF4G1Q04637 1599 aaKnown RBP32.68■■■□□ 2.82
E2F1-201ENST00000343380 SCAF1Q9H7N4 1312 aaKnown RBP32.66■■■□□ 2.82
E2F1-201ENST00000343380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.65■■■□□ 2.82
E2F1-201ENST00000343380 CCER1Q8TC90 406 aaPredicted RBP32.48■■■□□ 2.79
E2F1-201ENST00000343380 ABCC8Q09428 1581 aa32.47■■■□□ 2.79
E2F1-201ENST00000343380 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
E2F1-201ENST00000343380 TTBK1Q5TCY1 1321 aaPredicted RBP32.38■■■□□ 2.77
E2F1-201ENST00000343380 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
E2F1-201ENST00000343380 SOGA1O94964 1423 aa32.28■■■□□ 2.76
E2F1-201ENST00000343380 SMARCA2P51531 1590 aa32.26■■■□□ 2.75
E2F1-201ENST00000343380 SMARCA4P51532 1647 aa32.25■■■□□ 2.75
E2F1-201ENST00000343380 WRNQ14191 1432 aaPredicted RBP eCLIP32.25■■■□□ 2.755e-6■■■■■ 29.2
E2F1-201ENST00000343380 CEP162Q5TB80 1403 aa32.25■■■□□ 2.75
E2F1-201ENST00000343380 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
E2F1-201ENST00000343380 PELP1Q8IZL8 1130 aaKnown RBP32.18■■■□□ 2.74
E2F1-201ENST00000343380 RUSC2Q8N2Y8 1516 aa32.13■■■□□ 2.73
E2F1-201ENST00000343380 NEUROD1Q13562 356 aa32.13■■■□□ 2.73
E2F1-201ENST00000343380 TNIKQ9UKE5 1360 aa32.11■■■□□ 2.73
E2F1-201ENST00000343380 ACIN1Q9UKV3 1341 aaKnown RBP32.11■■■□□ 2.73
E2F1-201ENST00000343380 DIEXFQ68CQ4 756 aaKnown RBP32.09■■■□□ 2.73
E2F1-201ENST00000343380 CSRNP3Q8WYN3 585 aa32.05■■■□□ 2.72
E2F1-201ENST00000343380 UBTFP17480 764 aaKnown RBP32.01■■■□□ 2.72
E2F1-201ENST00000343380 EEA1Q15075 1411 aa31.92■■■□□ 2.7
E2F1-201ENST00000343380 BICRAQ9NZM4 1560 aa31.87■■■□□ 2.69
E2F1-201ENST00000343380 GOLGA3Q08378 1498 aa31.82■■■□□ 2.69
E2F1-201ENST00000343380 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.681e-6■■■■■ 38.4
E2F1-201ENST00000343380 GTF3C3Q9Y5Q9 886 aa31.81■■■□□ 2.68
E2F1-201ENST00000343380 CENPBP07199 599 aaPredicted RBP31.74■■■□□ 2.67
E2F1-201ENST00000343380 ZNF316A6NFI3 1004 aaPredicted RBP31.7■■■□□ 2.67
E2F1-201ENST00000343380 HNRNPUL2Q1KMD3 747 aaKnown RBP31.64■■■□□ 2.66
E2F1-201ENST00000343380 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
E2F1-201ENST00000343380 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
E2F1-201ENST00000343380 CLIP1P30622 1438 aa31.54■■■□□ 2.64
E2F1-201ENST00000343380 PEG3Q9GZU2 1588 aa31.54■■■□□ 2.64
E2F1-201ENST00000343380 KIF21BO75037 1637 aa31.52■■■□□ 2.64
E2F1-201ENST00000343380 YTHDC1Q96MU7 727 aaKnown RBP31.46■■■□□ 2.63
E2F1-201ENST00000343380 VPS8Q8N3P4 1428 aa31.43■■■□□ 2.62
E2F1-201ENST00000343380 RAPGEF2Q9Y4G8 1499 aa31.43■■■□□ 2.62
E2F1-201ENST00000343380 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
E2F1-201ENST00000343380 MIER1Q8N108 512 aa31.42■■■□□ 2.62
E2F1-201ENST00000343380 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
E2F1-201ENST00000343380 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
E2F1-201ENST00000343380 APLP2Q06481 763 aa31.28■■■□□ 2.6
E2F1-201ENST00000343380 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
E2F1-201ENST00000343380 KANK4Q5T7N3 995 aaPredicted RBP31.02■■■□□ 2.56
E2F1-201ENST00000343380 ARAP1Q96P48 1450 aa31.01■■■□□ 2.55
E2F1-201ENST00000343380 DHX57Q6P158 1386 aaKnown RBP31■■■□□ 2.55
E2F1-201ENST00000343380 PRXQ9BXM0 1461 aa30.99■■■□□ 2.55
E2F1-201ENST00000343380 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.55
E2F1-201ENST00000343380 ERICH3Q5RHP9 1530 aa30.92■■■□□ 2.54
E2F1-201ENST00000343380 CLSPNQ9HAW4 1339 aa30.88■■■□□ 2.53
E2F1-201ENST00000343380 CUX1P39880 1505 aa30.81■■■□□ 2.52
E2F1-201ENST00000343380 RRBP1Q9P2E9 1410 aaKnown RBP30.76■■■□□ 2.52
E2F1-201ENST00000343380 KIF27Q86VH2 1401 aa30.7■■■□□ 2.51
E2F1-201ENST00000343380 ARHGAP35Q9NRY4 1499 aa30.67■■■□□ 2.5
E2F1-201ENST00000343380 ITGAEP38570 1179 aa30.66■■■□□ 2.5
E2F1-201ENST00000343380 CCNB3Q8WWL7 1395 aa30.64■■■□□ 2.5
E2F1-201ENST00000343380 NCAPD3P42695 1498 aa30.62■■■□□ 2.49
E2F1-201ENST00000343380 CUX2O14529 1486 aa30.61■■■□□ 2.49
E2F1-201ENST00000343380 HMGXB3Q12766 1538 aa30.58■■■□□ 2.49
E2F1-201ENST00000343380 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
E2F1-201ENST00000343380 CFTRP13569 1480 aa30.54■■■□□ 2.48
E2F1-201ENST00000343380 MYT1Q01538 1121 aa30.53■■■□□ 2.48
E2F1-201ENST00000343380 SUPT16HQ9Y5B9 1047 aaKnown RBP30.53■■■□□ 2.48
E2F1-201ENST00000343380 RAB3GAP2Q9H2M9 1393 aa30.47■■■□□ 2.47
E2F1-201ENST00000343380 KCNH8Q96L42 1107 aa30.43■■■□□ 2.46
E2F1-201ENST00000343380 IGF1RP08069 1367 aa30.43■■■□□ 2.46
E2F1-201ENST00000343380 MAPKBP1O60336 1514 aa30.42■■■□□ 2.46
E2F1-201ENST00000343380 TIAM1Q13009 1591 aa30.34■■■□□ 2.45
E2F1-201ENST00000343380 PHLDB1Q86UU1 1377 aa30.3■■■□□ 2.44
E2F1-201ENST00000343380 CARMIL1Q5VZK9 1371 aa30.27■■■□□ 2.44
E2F1-201ENST00000343380 SETD5Q9C0A6 1442 aa30.27■■■□□ 2.44
E2F1-201ENST00000343380 SIN3AQ96ST3 1273 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms