RNA–Protein interactions for RNA: ENST00000581378.5

ACADVL-225, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-225ENST00000581378 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
ACADVL-225ENST00000581378 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
ACADVL-225ENST00000581378 ZCCHC6Q5VYS8 1495 aaKnown RBP31.6■■■□□ 2.65
ACADVL-225ENST00000581378 ABCC9O60706 1549 aa31.48■■■□□ 2.63
ACADVL-225ENST00000581378 DCAF1Q9Y4B6 1507 aa31.28■■■□□ 2.6
ACADVL-225ENST00000581378 DCAF8L2P0C7V8 631 aa31.11■■■□□ 2.57
ACADVL-225ENST00000581378 MYO15BQ96JP2 1530 aa31.08■■■□□ 2.57
ACADVL-225ENST00000581378 NACADO15069 1562 aa30.93■■■□□ 2.54
ACADVL-225ENST00000581378 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
ACADVL-225ENST00000581378 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
ACADVL-225ENST00000581378 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
ACADVL-225ENST00000581378 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
ACADVL-225ENST00000581378 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
ACADVL-225ENST00000581378 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.326e-14■■■■■ 50
ACADVL-225ENST00000581378 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
ACADVL-225ENST00000581378 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
ACADVL-225ENST00000581378 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
ACADVL-225ENST00000581378 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
ACADVL-225ENST00000581378 SMARCA4P51532 1647 aa29.03■■■□□ 2.24
ACADVL-225ENST00000581378 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
ACADVL-225ENST00000581378 EIF4G1Q04637 1599 aaKnown RBP28.87■■■□□ 2.21
ACADVL-225ENST00000581378 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
ACADVL-225ENST00000581378 WIZO95785 1651 aa28.74■■■□□ 2.19
ACADVL-225ENST00000581378 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
ACADVL-225ENST00000581378 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
ACADVL-225ENST00000581378 TOP2AP11388 1531 aaKnown RBP28.56■■■□□ 2.16
ACADVL-225ENST00000581378 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
ACADVL-225ENST00000581378 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
ACADVL-225ENST00000581378 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
ACADVL-225ENST00000581378 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
ACADVL-225ENST00000581378 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.1
ACADVL-225ENST00000581378 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
ACADVL-225ENST00000581378 CFTRP13569 1480 aa27.77■■■□□ 2.04
ACADVL-225ENST00000581378 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
ACADVL-225ENST00000581378 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
ACADVL-225ENST00000581378 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
ACADVL-225ENST00000581378 PRDM2Q13029 1718 aa27.55■■■□□ 2
ACADVL-225ENST00000581378 NESP48681 1621 aa27.49■■□□□ 1.99
ACADVL-225ENST00000581378 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
ACADVL-225ENST00000581378 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
ACADVL-225ENST00000581378 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
ACADVL-225ENST00000581378 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
ACADVL-225ENST00000581378 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
ACADVL-225ENST00000581378 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
ACADVL-225ENST00000581378 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
ACADVL-225ENST00000581378 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
ACADVL-225ENST00000581378 CUX1P39880 1505 aa27.2■■□□□ 1.94
ACADVL-225ENST00000581378 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
ACADVL-225ENST00000581378 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
ACADVL-225ENST00000581378 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
ACADVL-225ENST00000581378 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
ACADVL-225ENST00000581378 MRC2Q9UBG0 1479 aa27.08■■□□□ 1.93
ACADVL-225ENST00000581378 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
ACADVL-225ENST00000581378 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
ACADVL-225ENST00000581378 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
ACADVL-225ENST00000581378 EEA1Q15075 1411 aa26.94■■□□□ 1.9
ACADVL-225ENST00000581378 WDR62O43379 1518 aa26.93■■□□□ 1.9
ACADVL-225ENST00000581378 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
ACADVL-225ENST00000581378 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
ACADVL-225ENST00000581378 SOGA1O94964 1423 aa26.86■■□□□ 1.89
ACADVL-225ENST00000581378 KIF27Q86VH2 1401 aa26.79■■□□□ 1.88
ACADVL-225ENST00000581378 ABCA10Q8WWZ4 1543 aa26.78■■□□□ 1.88
ACADVL-225ENST00000581378 FAM9AQ8IZU1 332 aaPredicted RBP26.77■■□□□ 1.88
ACADVL-225ENST00000581378 CUX2O14529 1486 aa26.74■■□□□ 1.87
ACADVL-225ENST00000581378 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
ACADVL-225ENST00000581378 RUSC2Q8N2Y8 1516 aa26.72■■□□□ 1.87
ACADVL-225ENST00000581378 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
ACADVL-225ENST00000581378 CSRNP3Q8WYN3 585 aa26.71■■□□□ 1.87
ACADVL-225ENST00000581378 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
ACADVL-225ENST00000581378 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
ACADVL-225ENST00000581378 ABCA5Q8WWZ7 1642 aa26.55■■□□□ 1.84
ACADVL-225ENST00000581378 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
ACADVL-225ENST00000581378 GAPVD1Q14C86 1478 aa26.54■■□□□ 1.84
ACADVL-225ENST00000581378 IGF1RP08069 1367 aa26.53■■□□□ 1.84
ACADVL-225ENST00000581378 KIF21BO75037 1637 aa26.51■■□□□ 1.83
ACADVL-225ENST00000581378 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
ACADVL-225ENST00000581378 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
ACADVL-225ENST00000581378 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
ACADVL-225ENST00000581378 GOLGA3Q08378 1498 aa26.47■■□□□ 1.83
ACADVL-225ENST00000581378 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
ACADVL-225ENST00000581378 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.821e-7■■■■□ 24.7
ACADVL-225ENST00000581378 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
ACADVL-225ENST00000581378 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
ACADVL-225ENST00000581378 CUL7Q14999 1698 aa26.41■■□□□ 1.82
ACADVL-225ENST00000581378 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
ACADVL-225ENST00000581378 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
ACADVL-225ENST00000581378 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
ACADVL-225ENST00000581378 EHMT2Q96KQ7 1210 aa26.32■■□□□ 1.8
ACADVL-225ENST00000581378 TNIKQ9UKE5 1360 aa26.32■■□□□ 1.8
ACADVL-225ENST00000581378 UBTFP17480 764 aaKnown RBP26.3■■□□□ 1.8
ACADVL-225ENST00000581378 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
ACADVL-225ENST00000581378 MAGI1Q96QZ7 1491 aaPredicted RBP26.26■■□□□ 1.79
ACADVL-225ENST00000581378 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
ACADVL-225ENST00000581378 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
ACADVL-225ENST00000581378 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
ACADVL-225ENST00000581378 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
ACADVL-225ENST00000581378 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
ACADVL-225ENST00000581378 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
ACADVL-225ENST00000581378 CLIP1P30622 1438 aa26■■□□□ 1.75
ACADVL-225ENST00000581378 CTTNBP2Q8WZ74 1663 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms