RNA–Protein interactions for RNA: ENST00000318911.4

CYC1-201, Transcript of cytochrome c1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYC1, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYC1-201ENST00000318911 NISCHQ9Y2I1 1504 aa54.44■■■■■ 6.3
CYC1-201ENST00000318911 CCDC180Q9P1Z9 1646 aa48.76■■■■■ 5.4
CYC1-201ENST00000318911 ABCC9O60706 1549 aa48.45■■■■■ 5.35
CYC1-201ENST00000318911 RB1CC1Q8TDY2 1594 aa46.28■■■■■ 5
CYC1-201ENST00000318911 NACADO15069 1562 aa46.05■■■■■ 4.96
CYC1-201ENST00000318911 DCAF8L2P0C7V8 631 aa45.69■■■■■ 4.9
CYC1-201ENST00000318911 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.88
CYC1-201ENST00000318911 DNAJC5BQ9UF47 199 aa45.27■■■■■ 4.84
CYC1-201ENST00000318911 UNC13AQ9UPW8 1703 aa45.2■■■■■ 4.83
CYC1-201ENST00000318911 ZCCHC6Q5VYS8 1495 aaKnown RBP45.17■■■■■ 4.82
CYC1-201ENST00000318911 PABPN1Q86U42 306 aaKnown RBP eCLIP45.12■■■■■ 4.811e-15■■■■■ 40.8
CYC1-201ENST00000318911 DCAF1Q9Y4B6 1507 aa45.04■■■■■ 4.8
CYC1-201ENST00000318911 BICRAQ9NZM4 1560 aa44.94■■■■■ 4.78
CYC1-201ENST00000318911 SHROOM4Q9ULL8 1493 aa44.45■■■■■ 4.71
CYC1-201ENST00000318911 SCRIBQ14160 1630 aa44.36■■■■■ 4.69
CYC1-201ENST00000318911 CC2D2AQ9P2K1 1620 aa43.82■■■■■ 4.61
CYC1-201ENST00000318911 EIF4G1Q04637 1599 aaKnown RBP43.81■■■■■ 4.6
CYC1-201ENST00000318911 CECR2Q9BXF3 1484 aa43.66■■■■■ 4.58
CYC1-201ENST00000318911 NCAPD3P42695 1498 aa42.53■■■■■ 4.4
CYC1-201ENST00000318911 SMARCA4P51532 1647 aa42.4■■■■■ 4.38
CYC1-201ENST00000318911 ATAD2BQ9ULI0 1458 aa42.4■■■■■ 4.38
CYC1-201ENST00000318911 SMARCA2P51531 1590 aa42.3■■■■■ 4.36
CYC1-201ENST00000318911 BAZ1AQ9NRL2 1556 aaPredicted RBP42.24■■■■■ 4.35
CYC1-201ENST00000318911 HMGXB3Q12766 1538 aa42.23■■■■■ 4.35
CYC1-201ENST00000318911 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
CYC1-201ENST00000318911 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
CYC1-201ENST00000318911 MROH2BQ7Z745 1585 aa41.92■■■■■ 4.3
CYC1-201ENST00000318911 ERCC6Q03468 1493 aa41.83■■■■■ 4.29
CYC1-201ENST00000318911 CUX2O14529 1486 aa41.75■■■■■ 4.27
CYC1-201ENST00000318911 NESP48681 1621 aa41.69■■■■■ 4.27
CYC1-201ENST00000318911 LAMC3Q9Y6N6 1575 aa41.51■■■■■ 4.24
CYC1-201ENST00000318911 DNAJC5Q9H3Z4 198 aa41.43■■■■■ 4.22
CYC1-201ENST00000318911 WIZO95785 1651 aa41.39■■■■■ 4.22
CYC1-201ENST00000318911 THOC2Q8NI27 1593 aaKnown RBP41.28■■■■■ 4.2
CYC1-201ENST00000318911 PDS5BQ9NTI5 1447 aa41.25■■■■■ 4.19
CYC1-201ENST00000318911 CADPSQ9ULU8 1353 aa41.22■■■■■ 4.19
CYC1-201ENST00000318911 KIF21AQ7Z4S6 1674 aa41.17■■■■■ 4.18
CYC1-201ENST00000318911 RSF1Q96T23 1441 aaPredicted RBP41.15■■■■■ 4.18
CYC1-201ENST00000318911 TOP2AP11388 1531 aaKnown RBP40.94■■■■■ 4.14
CYC1-201ENST00000318911 MRC2Q9UBG0 1479 aa40.87■■■■■ 4.13
CYC1-201ENST00000318911 CFTRP13569 1480 aa40.81■■■■■ 4.12
CYC1-201ENST00000318911 WDR62O43379 1518 aa40.79■■■■■ 4.12
CYC1-201ENST00000318911 CEP164Q9UPV0 1460 aa40.75■■■■■ 4.11
CYC1-201ENST00000318911 FANCD2Q9BXW9 1451 aa40.72■■■■■ 4.11
CYC1-201ENST00000318911 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
CYC1-201ENST00000318911 PRDM2Q13029 1718 aa40.38■■■■■ 4.05
CYC1-201ENST00000318911 URB2Q14146 1524 aaKnown RBP40.37■■■■■ 4.05
CYC1-201ENST00000318911 TOPBP1Q92547 1522 aa39.99■■■■□ 3.99
CYC1-201ENST00000318911 ABCC8Q09428 1581 aa39.96■■■■□ 3.99
CYC1-201ENST00000318911 IFT140Q96RY7 1462 aa39.95■■■■□ 3.99
CYC1-201ENST00000318911 DNMBPQ6XZF7 1577 aa39.87■■■■□ 3.97
CYC1-201ENST00000318911 OSCARQ8IYS5 282 aa39.83■■■■□ 3.97
CYC1-201ENST00000318911 ZNF608Q9ULD9 1512 aaPredicted RBP39.82■■■■□ 3.97
CYC1-201ENST00000318911 EIF4G3O43432 1585 aaKnown RBP39.63■■■■□ 3.93
CYC1-201ENST00000318911 TARBP1Q13395 1621 aaKnown RBP39.62■■■■□ 3.93
CYC1-201ENST00000318911 TRIM41Q8WV44 630 aa39.61■■■■□ 3.93
CYC1-201ENST00000318911 POLA1P09884 1462 aaPredicted RBP39.6■■■■□ 3.93
CYC1-201ENST00000318911 AQRO60306 1485 aaKnown RBP eCLIP39.49■■■■□ 3.913e-8■■■■□ 21.3
CYC1-201ENST00000318911 RAD54L2Q9Y4B4 1467 aa39.41■■■■□ 3.9
CYC1-201ENST00000318911 SOGA1O94964 1423 aa39.4■■■■□ 3.9
CYC1-201ENST00000318911 CUX1P39880 1505 aa39.37■■■■□ 3.89
CYC1-201ENST00000318911 SUPT5HO00267 1087 aaKnown RBP39.37■■■■□ 3.89
CYC1-201ENST00000318911 FGD5Q6ZNL6 1462 aa39.36■■■■□ 3.89
CYC1-201ENST00000318911 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
CYC1-201ENST00000318911 RIMBP3CA6NJZ7 1639 aa39.29■■■■□ 3.88
CYC1-201ENST00000318911 RIMBP3BA6NNM3 1639 aa39.29■■■■□ 3.88
CYC1-201ENST00000318911 RIMBP3Q9UFD9 1639 aa39.29■■■■□ 3.88
CYC1-201ENST00000318911 TDRD9Q8NDG6 1382 aaKnown RBP39.27■■■■□ 3.88
CYC1-201ENST00000318911 CHD1O14646 1710 aa39.26■■■■□ 3.87
CYC1-201ENST00000318911 ARHGEF11O15085 1522 aa39.2■■■■□ 3.87
CYC1-201ENST00000318911 FBLN2P98095 1184 aa39.12■■■■□ 3.85
CYC1-201ENST00000318911 SNAPC4Q5SXM2 1469 aa39.11■■■■□ 3.85
CYC1-201ENST00000318911 GRIN2BQ13224 1484 aa39.05■■■■□ 3.84
CYC1-201ENST00000318911 MAGI1Q96QZ7 1491 aaPredicted RBP39.05■■■■□ 3.84
CYC1-201ENST00000318911 ABCA10Q8WWZ4 1543 aa38.97■■■■□ 3.83
CYC1-201ENST00000318911 GAPVD1Q14C86 1478 aa38.93■■■■□ 3.82
CYC1-201ENST00000318911 CHMP7Q8WUX9 453 aaPredicted RBP38.92■■■■□ 3.82
CYC1-201ENST00000318911 SYNJ2O15056 1496 aa38.91■■■■□ 3.82
CYC1-201ENST00000318911 ABCA5Q8WWZ7 1642 aa38.89■■■■□ 3.82
CYC1-201ENST00000318911 PBRM1Q86U86 1689 aa38.88■■■■□ 3.81
CYC1-201ENST00000318911 CLASP1Q7Z460 1538 aa38.88■■■■□ 3.81
CYC1-201ENST00000318911 SYNJ1O43426 1573 aa38.86■■■■□ 3.81
CYC1-201ENST00000318911 CYB5RLQ6IPT4 315 aa38.85■■■■□ 3.81
CYC1-201ENST00000318911 WRNQ14191 1432 aaPredicted RBP eCLIP38.83■■■■□ 3.812e-6■□□□□ 11.1
CYC1-201ENST00000318911 ARAP1Q96P48 1450 aa38.83■■■■□ 3.81
CYC1-201ENST00000318911 BIVM-ERCC5R4GMW8 1640 aa38.82■■■■□ 3.81
CYC1-201ENST00000318911 TOP2BQ02880 1626 aa38.81■■■■□ 3.8
CYC1-201ENST00000318911 ADAMTS12P58397 1594 aa38.56■■■■□ 3.76
CYC1-201ENST00000318911 GRIN2AQ12879 1464 aa38.55■■■■□ 3.76
CYC1-201ENST00000318911 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
CYC1-201ENST00000318911 FHAD1B1AJZ9 1412 aa38.47■■■■□ 3.75
CYC1-201ENST00000318911 NUP160Q12769 1436 aa38.44■■■■□ 3.74
CYC1-201ENST00000318911 CEP170Q5SW79 1584 aa38.39■■■■□ 3.74
CYC1-201ENST00000318911 TRHP20396 242 aaPredicted RBP38.31■■■■□ 3.72
CYC1-201ENST00000318911 SHROOM2Q13796 1616 aa38.24■■■■□ 3.71
CYC1-201ENST00000318911 ERCC6L2Q5T890 1561 aa38.23■■■■□ 3.71
CYC1-201ENST00000318911 KIF27Q86VH2 1401 aa38.06■■■■□ 3.68
CYC1-201ENST00000318911 IGF1RP08069 1367 aa38.03■■■■□ 3.68
CYC1-201ENST00000318911 RUSC2Q8N2Y8 1516 aa38.02■■■■□ 3.68
CYC1-201ENST00000318911 JPH4Q96JJ6 628 aa38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms