RNA–Protein interactions for RNA: ENST00000588620.5

MRPL38-217, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-217ENST00000588620 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
MRPL38-217ENST00000588620 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
MRPL38-217ENST00000588620 ABCC9O60706 1549 aa27.58■■■□□ 2.01
MRPL38-217ENST00000588620 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
MRPL38-217ENST00000588620 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
MRPL38-217ENST00000588620 NACADO15069 1562 aa26.37■■□□□ 1.81
MRPL38-217ENST00000588620 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
MRPL38-217ENST00000588620 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
MRPL38-217ENST00000588620 DCAF1Q9Y4B6 1507 aa25.94■■□□□ 1.74
MRPL38-217ENST00000588620 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.72
MRPL38-217ENST00000588620 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.712e-10■■■■■ 39.9
MRPL38-217ENST00000588620 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
MRPL38-217ENST00000588620 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
MRPL38-217ENST00000588620 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
MRPL38-217ENST00000588620 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
MRPL38-217ENST00000588620 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
MRPL38-217ENST00000588620 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
MRPL38-217ENST00000588620 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
MRPL38-217ENST00000588620 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
MRPL38-217ENST00000588620 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
MRPL38-217ENST00000588620 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
MRPL38-217ENST00000588620 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
MRPL38-217ENST00000588620 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
MRPL38-217ENST00000588620 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
MRPL38-217ENST00000588620 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
MRPL38-217ENST00000588620 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
MRPL38-217ENST00000588620 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
MRPL38-217ENST00000588620 WIZO95785 1651 aa23.94■■□□□ 1.42
MRPL38-217ENST00000588620 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
MRPL38-217ENST00000588620 ERCC6Q03468 1493 aa23.82■■□□□ 1.4
MRPL38-217ENST00000588620 NESP48681 1621 aa23.8■■□□□ 1.4
MRPL38-217ENST00000588620 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
MRPL38-217ENST00000588620 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
MRPL38-217ENST00000588620 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
MRPL38-217ENST00000588620 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
MRPL38-217ENST00000588620 CUX2O14529 1486 aa23.58■■□□□ 1.37
MRPL38-217ENST00000588620 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
MRPL38-217ENST00000588620 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
MRPL38-217ENST00000588620 CFTRP13569 1480 aa23.42■■□□□ 1.34
MRPL38-217ENST00000588620 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
MRPL38-217ENST00000588620 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
MRPL38-217ENST00000588620 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
MRPL38-217ENST00000588620 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
MRPL38-217ENST00000588620 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
MRPL38-217ENST00000588620 WDR62O43379 1518 aa23.24■■□□□ 1.31
MRPL38-217ENST00000588620 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
MRPL38-217ENST00000588620 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
MRPL38-217ENST00000588620 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
MRPL38-217ENST00000588620 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
MRPL38-217ENST00000588620 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
MRPL38-217ENST00000588620 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
MRPL38-217ENST00000588620 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
MRPL38-217ENST00000588620 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
MRPL38-217ENST00000588620 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
MRPL38-217ENST00000588620 CUX1P39880 1505 aa22.71■■□□□ 1.23
MRPL38-217ENST00000588620 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
MRPL38-217ENST00000588620 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
MRPL38-217ENST00000588620 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
MRPL38-217ENST00000588620 SOGA1O94964 1423 aa22.67■■□□□ 1.22
MRPL38-217ENST00000588620 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
MRPL38-217ENST00000588620 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.212e-11■■■■■ 31
MRPL38-217ENST00000588620 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
MRPL38-217ENST00000588620 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
MRPL38-217ENST00000588620 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
MRPL38-217ENST00000588620 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
MRPL38-217ENST00000588620 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
MRPL38-217ENST00000588620 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
MRPL38-217ENST00000588620 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
MRPL38-217ENST00000588620 FBLN2P98095 1184 aa22.45■■□□□ 1.18
MRPL38-217ENST00000588620 CHD1O14646 1710 aa22.43■■□□□ 1.18
MRPL38-217ENST00000588620 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
MRPL38-217ENST00000588620 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
MRPL38-217ENST00000588620 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
MRPL38-217ENST00000588620 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
MRPL38-217ENST00000588620 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
MRPL38-217ENST00000588620 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
MRPL38-217ENST00000588620 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
MRPL38-217ENST00000588620 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
MRPL38-217ENST00000588620 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
MRPL38-217ENST00000588620 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
MRPL38-217ENST00000588620 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
MRPL38-217ENST00000588620 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
MRPL38-217ENST00000588620 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
MRPL38-217ENST00000588620 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
MRPL38-217ENST00000588620 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
MRPL38-217ENST00000588620 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
MRPL38-217ENST00000588620 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
MRPL38-217ENST00000588620 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
MRPL38-217ENST00000588620 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
MRPL38-217ENST00000588620 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
MRPL38-217ENST00000588620 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
MRPL38-217ENST00000588620 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
MRPL38-217ENST00000588620 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
MRPL38-217ENST00000588620 NUP160Q12769 1436 aa22■■□□□ 1.11
MRPL38-217ENST00000588620 IGF1RP08069 1367 aa21.97■■□□□ 1.11
MRPL38-217ENST00000588620 CUL7Q14999 1698 aa21.96■■□□□ 1.11
MRPL38-217ENST00000588620 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
MRPL38-217ENST00000588620 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
MRPL38-217ENST00000588620 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
MRPL38-217ENST00000588620 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms