RNA–Protein interactions for RNA: ENST00000358794.9

STIP1-203, Transcript of stress induced phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene STIP1, Length 2,743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1-203ENST00000358794 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
STIP1-203ENST00000358794 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
STIP1-203ENST00000358794 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
STIP1-203ENST00000358794 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
STIP1-203ENST00000358794 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
STIP1-203ENST00000358794 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
STIP1-203ENST00000358794 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
STIP1-203ENST00000358794 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
STIP1-203ENST00000358794 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
STIP1-203ENST00000358794 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
STIP1-203ENST00000358794 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
STIP1-203ENST00000358794 ABCC9O60706 1549 aa23.82■■□□□ 1.4
STIP1-203ENST00000358794 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
STIP1-203ENST00000358794 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
STIP1-203ENST00000358794 HRCP23327 699 aa23.71■■□□□ 1.39
STIP1-203ENST00000358794 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
STIP1-203ENST00000358794 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
STIP1-203ENST00000358794 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
STIP1-203ENST00000358794 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
STIP1-203ENST00000358794 NACADO15069 1562 aa23.41■■□□□ 1.34
STIP1-203ENST00000358794 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
STIP1-203ENST00000358794 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
STIP1-203ENST00000358794 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
STIP1-203ENST00000358794 EHMT2Q96KQ7 1210 aa23.27■■□□□ 1.32
STIP1-203ENST00000358794 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
STIP1-203ENST00000358794 WIZO95785 1651 aa23.2■■□□□ 1.3
STIP1-203ENST00000358794 MYT1Q01538 1121 aa22.98■■□□□ 1.27
STIP1-203ENST00000358794 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
STIP1-203ENST00000358794 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
STIP1-203ENST00000358794 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
STIP1-203ENST00000358794 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
STIP1-203ENST00000358794 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.234e-11■■■■■ 40
STIP1-203ENST00000358794 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
STIP1-203ENST00000358794 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
STIP1-203ENST00000358794 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
STIP1-203ENST00000358794 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
STIP1-203ENST00000358794 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
STIP1-203ENST00000358794 SOGA1O94964 1423 aa22.54■■□□□ 1.2
STIP1-203ENST00000358794 BICRAQ9NZM4 1560 aa22.52■■□□□ 1.2
STIP1-203ENST00000358794 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
STIP1-203ENST00000358794 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
STIP1-203ENST00000358794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
STIP1-203ENST00000358794 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
STIP1-203ENST00000358794 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
STIP1-203ENST00000358794 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
STIP1-203ENST00000358794 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
STIP1-203ENST00000358794 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
STIP1-203ENST00000358794 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.166e-7■■■■■ 33.4
STIP1-203ENST00000358794 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
STIP1-203ENST00000358794 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
STIP1-203ENST00000358794 EEA1Q15075 1411 aa22.21■■□□□ 1.15
STIP1-203ENST00000358794 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
STIP1-203ENST00000358794 SYNJ1O43426 1573 aa22.18■■□□□ 1.14
STIP1-203ENST00000358794 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
STIP1-203ENST00000358794 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
STIP1-203ENST00000358794 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
STIP1-203ENST00000358794 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
STIP1-203ENST00000358794 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
STIP1-203ENST00000358794 CLIP1P30622 1438 aa21.95■■□□□ 1.1
STIP1-203ENST00000358794 KIF21BO75037 1637 aa21.94■■□□□ 1.1
STIP1-203ENST00000358794 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
STIP1-203ENST00000358794 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
STIP1-203ENST00000358794 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
STIP1-203ENST00000358794 VPS8Q8N3P4 1428 aa21.82■■□□□ 1.08
STIP1-203ENST00000358794 APLP2Q06481 763 aa21.75■■□□□ 1.07
STIP1-203ENST00000358794 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
STIP1-203ENST00000358794 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
STIP1-203ENST00000358794 NEUROD1Q13562 356 aa21.7■■□□□ 1.06
STIP1-203ENST00000358794 CUX1P39880 1505 aa21.69■■□□□ 1.06
STIP1-203ENST00000358794 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
STIP1-203ENST00000358794 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
STIP1-203ENST00000358794 ZNF316A6NFI3 1004 aaPredicted RBP21.65■■□□□ 1.06
STIP1-203ENST00000358794 ACIN1Q9UKV3 1341 aaKnown RBP21.64■■□□□ 1.06
STIP1-203ENST00000358794 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
STIP1-203ENST00000358794 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
STIP1-203ENST00000358794 CFTRP13569 1480 aa21.59■■□□□ 1.05
STIP1-203ENST00000358794 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
STIP1-203ENST00000358794 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
STIP1-203ENST00000358794 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
STIP1-203ENST00000358794 MIER1Q8N108 512 aa21.44■■□□□ 1.02
STIP1-203ENST00000358794 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
STIP1-203ENST00000358794 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
STIP1-203ENST00000358794 ARHGAP35Q9NRY4 1499 aa21.42■■□□□ 1.02
STIP1-203ENST00000358794 CUX2O14529 1486 aa21.4■■□□□ 1.02
STIP1-203ENST00000358794 IGF1RP08069 1367 aa21.39■■□□□ 1.02
STIP1-203ENST00000358794 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
STIP1-203ENST00000358794 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
STIP1-203ENST00000358794 ITGAEP38570 1179 aa21.35■■□□□ 1.01
STIP1-203ENST00000358794 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
STIP1-203ENST00000358794 RRBP1Q9P2E9 1410 aaKnown RBP21.3■■□□□ 1
STIP1-203ENST00000358794 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
STIP1-203ENST00000358794 PRDM2Q13029 1718 aa21.27■■□□□ 1
STIP1-203ENST00000358794 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
STIP1-203ENST00000358794 CCNB3Q8WWL7 1395 aa21.25■□□□□ 0.99
STIP1-203ENST00000358794 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
STIP1-203ENST00000358794 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
STIP1-203ENST00000358794 CLSPNQ9HAW4 1339 aa21.21■□□□□ 0.99
STIP1-203ENST00000358794 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
STIP1-203ENST00000358794 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
STIP1-203ENST00000358794 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms