RNA–Protein interactions for RNA: ENST00000309352.3

MRPL38-201, Transcript of mitochondrial ribosomal protein L38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL38, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-201ENST00000309352 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
MRPL38-201ENST00000309352 CCDC180Q9P1Z9 1646 aa43.61■■■■■ 4.57
MRPL38-201ENST00000309352 ZCCHC6Q5VYS8 1495 aaKnown RBP42.17■■■■■ 4.34
MRPL38-201ENST00000309352 DCAF1Q9Y4B6 1507 aa41.5■■■■■ 4.23
MRPL38-201ENST00000309352 DCAF8L2P0C7V8 631 aa41.42■■■■■ 4.22
MRPL38-201ENST00000309352 SHROOM4Q9ULL8 1493 aa41.1■■■■■ 4.17
MRPL38-201ENST00000309352 ABCC9O60706 1549 aa40.96■■■■■ 4.15
MRPL38-201ENST00000309352 MYO15BQ96JP2 1530 aa40.92■■■■■ 4.14
MRPL38-201ENST00000309352 NACADO15069 1562 aa40.58■■■■■ 4.09
MRPL38-201ENST00000309352 RB1CC1Q8TDY2 1594 aa40.16■■■■■ 4.02
MRPL38-201ENST00000309352 SCRIBQ14160 1630 aa40.12■■■■■ 4.01
MRPL38-201ENST00000309352 SUPT5HO00267 1087 aaKnown RBP39.76■■■■□ 3.96
MRPL38-201ENST00000309352 UNC13AQ9UPW8 1703 aa39.27■■■■□ 3.88
MRPL38-201ENST00000309352 RSF1Q96T23 1441 aaPredicted RBP39.01■■■■□ 3.84
MRPL38-201ENST00000309352 CECR2Q9BXF3 1484 aa38.91■■■■□ 3.82
MRPL38-201ENST00000309352 BICRAQ9NZM4 1560 aa38.85■■■■□ 3.81
MRPL38-201ENST00000309352 BAZ1AQ9NRL2 1556 aaPredicted RBP38.74■■■■□ 3.79
MRPL38-201ENST00000309352 MROH2BQ7Z745 1585 aa38.73■■■■□ 3.79
MRPL38-201ENST00000309352 PABPN1Q86U42 306 aaKnown RBP eCLIP38.71■■■■□ 3.792e-10■■■■■ 39.9
MRPL38-201ENST00000309352 SMARCA4P51532 1647 aa38.48■■■■□ 3.75
MRPL38-201ENST00000309352 WIZO95785 1651 aa38.42■■■■□ 3.74
MRPL38-201ENST00000309352 CHIC1Q5VXU3 224 aa38.19■■■■□ 3.7
MRPL38-201ENST00000309352 TOP2AP11388 1531 aaKnown RBP38.07■■■■□ 3.69
MRPL38-201ENST00000309352 PEG3Q9GZU2 1588 aa38.01■■■■□ 3.68
MRPL38-201ENST00000309352 SMARCA2P51531 1590 aa37.83■■■■□ 3.65
MRPL38-201ENST00000309352 ATAD2BQ9ULI0 1458 aa37.79■■■■□ 3.64
MRPL38-201ENST00000309352 EIF4G1Q04637 1599 aaKnown RBP37.71■■■■□ 3.63
MRPL38-201ENST00000309352 CCDC88BA6NC98 1476 aa37.68■■■■□ 3.62
MRPL38-201ENST00000309352 BAZ1BQ9UIG0 1483 aaKnown RBP37.63■■■■□ 3.61
MRPL38-201ENST00000309352 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
MRPL38-201ENST00000309352 TRIM41Q8WV44 630 aa37.41■■■■□ 3.58
MRPL38-201ENST00000309352 HMGXB3Q12766 1538 aa37.4■■■■□ 3.58
MRPL38-201ENST00000309352 CC2D2AQ9P2K1 1620 aa37.08■■■■□ 3.53
MRPL38-201ENST00000309352 ABCC8Q09428 1581 aa36.95■■■■□ 3.51
MRPL38-201ENST00000309352 WRNQ14191 1432 aaPredicted RBP eCLIP36.75■■■■□ 3.47
MRPL38-201ENST00000309352 LOC105371045A0A1W2PR82 267 aa36.72■■■■□ 3.47
MRPL38-201ENST00000309352 CFTRP13569 1480 aa36.68■■■■□ 3.46
MRPL38-201ENST00000309352 FAM9AQ8IZU1 332 aaPredicted RBP36.67■■■■□ 3.46
MRPL38-201ENST00000309352 CADPSQ9ULU8 1353 aa36.52■■■■□ 3.44
MRPL38-201ENST00000309352 SYNJ1O43426 1573 aa36.52■■■■□ 3.44
MRPL38-201ENST00000309352 PRDM2Q13029 1718 aa36.5■■■■□ 3.43
MRPL38-201ENST00000309352 EEA1Q15075 1411 aa36.44■■■■□ 3.42
MRPL38-201ENST00000309352 TOP2BQ02880 1626 aa36.4■■■■□ 3.42
MRPL38-201ENST00000309352 SOGA1O94964 1423 aa36.33■■■■□ 3.41
MRPL38-201ENST00000309352 BIVM-ERCC5R4GMW8 1640 aa36.33■■■■□ 3.41
MRPL38-201ENST00000309352 CSRNP3Q8WYN3 585 aa36.2■■■■□ 3.38
MRPL38-201ENST00000309352 CUX1P39880 1505 aa36.19■■■■□ 3.38
MRPL38-201ENST00000309352 RUSC2Q8N2Y8 1516 aa36.15■■■■□ 3.38
MRPL38-201ENST00000309352 LAMC3Q9Y6N6 1575 aa36.13■■■■□ 3.37
MRPL38-201ENST00000309352 EHMT2Q96KQ7 1210 aa36.11■■■■□ 3.37
MRPL38-201ENST00000309352 FANCD2Q9BXW9 1451 aa36.1■■■■□ 3.37
MRPL38-201ENST00000309352 NESP48681 1621 aa36.02■■■■□ 3.36
MRPL38-201ENST00000309352 DNAJC5BQ9UF47 199 aa35.96■■■■□ 3.35
MRPL38-201ENST00000309352 GOLGA3Q08378 1498 aa35.9■■■■□ 3.34
MRPL38-201ENST00000309352 CEP164Q9UPV0 1460 aa35.89■■■■□ 3.34
MRPL38-201ENST00000309352 PDS5BQ9NTI5 1447 aa35.89■■■■□ 3.34
MRPL38-201ENST00000309352 KIF21BO75037 1637 aa35.88■■■■□ 3.33
MRPL38-201ENST00000309352 TNIKQ9UKE5 1360 aa35.86■■■■□ 3.33
MRPL38-201ENST00000309352 KIF27Q86VH2 1401 aa35.84■■■■□ 3.33
MRPL38-201ENST00000309352 DNMBPQ6XZF7 1577 aa35.82■■■■□ 3.32
MRPL38-201ENST00000309352 UBTFP17480 764 aaKnown RBP35.8■■■■□ 3.32
MRPL38-201ENST00000309352 FGD5Q6ZNL6 1462 aa35.79■■■■□ 3.32
MRPL38-201ENST00000309352 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
MRPL38-201ENST00000309352 CEP162Q5TB80 1403 aa35.65■■■■□ 3.3
MRPL38-201ENST00000309352 CUX2O14529 1486 aa35.63■■■■□ 3.29
MRPL38-201ENST00000309352 ERICH3Q5RHP9 1530 aa35.61■■■■□ 3.29
MRPL38-201ENST00000309352 PRXQ9BXM0 1461 aa35.6■■■■□ 3.29
MRPL38-201ENST00000309352 RAPGEF2Q9Y4G8 1499 aa35.6■■■■□ 3.29
MRPL38-201ENST00000309352 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
MRPL38-201ENST00000309352 URB2Q14146 1524 aaKnown RBP35.58■■■■□ 3.29
MRPL38-201ENST00000309352 POLA1P09884 1462 aaPredicted RBP35.57■■■■□ 3.28
MRPL38-201ENST00000309352 ABCA10Q8WWZ4 1543 aa35.5■■■■□ 3.27
MRPL38-201ENST00000309352 IGF1RP08069 1367 aa35.44■■■■□ 3.26
MRPL38-201ENST00000309352 RAD54L2Q9Y4B4 1467 aa35.44■■■■□ 3.26
MRPL38-201ENST00000309352 PCGF6Q9BYE7 350 aa35.39■■■■□ 3.26
MRPL38-201ENST00000309352 TRIM26Q12899 539 aaPredicted RBP35.37■■■■□ 3.25
MRPL38-201ENST00000309352 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
MRPL38-201ENST00000309352 CLIP1P30622 1438 aa35.34■■■■□ 3.25
MRPL38-201ENST00000309352 CARMIL1Q5VZK9 1371 aa35.3■■■■□ 3.24
MRPL38-201ENST00000309352 WDR97A6NE52 1622 aa35.28■■■■□ 3.24
MRPL38-201ENST00000309352 ERCC6Q03468 1493 aa35.17■■■■□ 3.22
MRPL38-201ENST00000309352 CUL7Q14999 1698 aa35.16■■■■□ 3.22
MRPL38-201ENST00000309352 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
MRPL38-201ENST00000309352 ABCA5Q8WWZ7 1642 aa35.14■■■■□ 3.22
MRPL38-201ENST00000309352 WDR62O43379 1518 aa35.13■■■■□ 3.22
MRPL38-201ENST00000309352 GAPVD1Q14C86 1478 aa35.11■■■■□ 3.21
MRPL38-201ENST00000309352 TDRD9Q8NDG6 1382 aaKnown RBP35.1■■■■□ 3.21
MRPL38-201ENST00000309352 VPS8Q8N3P4 1428 aa35.06■■■■□ 3.2
MRPL38-201ENST00000309352 RANGAP1P46060 587 aaPredicted RBP35.06■■■■□ 3.2
MRPL38-201ENST00000309352 IFT140Q96RY7 1462 aa35■■■■□ 3.19
MRPL38-201ENST00000309352 PPARGC1BQ86YN6 1023 aaKnown RBP34.96■■■■□ 3.19
MRPL38-201ENST00000309352 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
MRPL38-201ENST00000309352 ARAP1Q96P48 1450 aa34.89■■■■□ 3.18
MRPL38-201ENST00000309352 APLP2Q06481 763 aa34.87■■■■□ 3.17
MRPL38-201ENST00000309352 ARHGAP35Q9NRY4 1499 aa34.85■■■■□ 3.17
MRPL38-201ENST00000309352 PBRM1Q86U86 1689 aa34.85■■■■□ 3.17
MRPL38-201ENST00000309352 AQRO60306 1485 aaKnown RBP eCLIP34.82■■■■□ 3.161e-6■■■□□ 17.1
MRPL38-201ENST00000309352 GRIN2BQ13224 1484 aa34.8■■■■□ 3.16
MRPL38-201ENST00000309352 CTTNBP2Q8WZ74 1663 aa34.78■■■■□ 3.16
MRPL38-201ENST00000309352 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms