RNA–Protein interactions for RNA: ENST00000480203.5

MRPL38-210, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-210ENST00000480203 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
MRPL38-210ENST00000480203 ABCC9O60706 1549 aa19.47■□□□□ 0.71
MRPL38-210ENST00000480203 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
MRPL38-210ENST00000480203 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
MRPL38-210ENST00000480203 DCAF8L2P0C7V8 631 aa18.49■□□□□ 0.55
MRPL38-210ENST00000480203 NACADO15069 1562 aa18.38■□□□□ 0.53
MRPL38-210ENST00000480203 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
MRPL38-210ENST00000480203 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.52e-10■■■■■ 39.9
MRPL38-210ENST00000480203 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
MRPL38-210ENST00000480203 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
MRPL38-210ENST00000480203 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.45
MRPL38-210ENST00000480203 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
MRPL38-210ENST00000480203 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
MRPL38-210ENST00000480203 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
MRPL38-210ENST00000480203 SCRIBQ14160 1630 aa17.66■□□□□ 0.42
MRPL38-210ENST00000480203 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
MRPL38-210ENST00000480203 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
MRPL38-210ENST00000480203 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
MRPL38-210ENST00000480203 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
MRPL38-210ENST00000480203 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
MRPL38-210ENST00000480203 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
MRPL38-210ENST00000480203 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
MRPL38-210ENST00000480203 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
MRPL38-210ENST00000480203 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
MRPL38-210ENST00000480203 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
MRPL38-210ENST00000480203 CUX2O14529 1486 aa16.8■□□□□ 0.28
MRPL38-210ENST00000480203 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
MRPL38-210ENST00000480203 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
MRPL38-210ENST00000480203 NESP48681 1621 aa16.67■□□□□ 0.26
MRPL38-210ENST00000480203 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
MRPL38-210ENST00000480203 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
MRPL38-210ENST00000480203 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
MRPL38-210ENST00000480203 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
MRPL38-210ENST00000480203 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
MRPL38-210ENST00000480203 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
MRPL38-210ENST00000480203 WIZO95785 1651 aa16.4■□□□□ 0.22
MRPL38-210ENST00000480203 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
MRPL38-210ENST00000480203 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
MRPL38-210ENST00000480203 RSF1Q96T23 1441 aaPredicted RBP16.34■□□□□ 0.21
MRPL38-210ENST00000480203 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
MRPL38-210ENST00000480203 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
MRPL38-210ENST00000480203 WDR62O43379 1518 aa16.28■□□□□ 0.2
MRPL38-210ENST00000480203 CFTRP13569 1480 aa16.27■□□□□ 0.19
MRPL38-210ENST00000480203 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
MRPL38-210ENST00000480203 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
MRPL38-210ENST00000480203 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
MRPL38-210ENST00000480203 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
MRPL38-210ENST00000480203 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
MRPL38-210ENST00000480203 IFT140Q96RY7 1462 aa16■□□□□ 0.15
MRPL38-210ENST00000480203 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
MRPL38-210ENST00000480203 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
MRPL38-210ENST00000480203 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
MRPL38-210ENST00000480203 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
MRPL38-210ENST00000480203 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
MRPL38-210ENST00000480203 FBLN2P98095 1184 aa15.85■□□□□ 0.13
MRPL38-210ENST00000480203 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.122e-11■■■■■ 31
MRPL38-210ENST00000480203 SOGA1O94964 1423 aa15.79■□□□□ 0.12
MRPL38-210ENST00000480203 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
MRPL38-210ENST00000480203 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
MRPL38-210ENST00000480203 CYB5RLQ6IPT4 315 aa15.77■□□□□ 0.12
MRPL38-210ENST00000480203 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
MRPL38-210ENST00000480203 ARHGEF11O15085 1522 aa15.74■□□□□ 0.11
MRPL38-210ENST00000480203 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
MRPL38-210ENST00000480203 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
MRPL38-210ENST00000480203 RIMBP3CA6NJZ7 1639 aa15.74■□□□□ 0.11
MRPL38-210ENST00000480203 RIMBP3BA6NNM3 1639 aa15.74■□□□□ 0.11
MRPL38-210ENST00000480203 RIMBP3Q9UFD9 1639 aa15.74■□□□□ 0.11
MRPL38-210ENST00000480203 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
MRPL38-210ENST00000480203 CHMP7Q8WUX9 453 aaPredicted RBP15.73■□□□□ 0.11
MRPL38-210ENST00000480203 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
MRPL38-210ENST00000480203 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
MRPL38-210ENST00000480203 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
MRPL38-210ENST00000480203 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
MRPL38-210ENST00000480203 CUX1P39880 1505 aa15.63■□□□□ 0.09
MRPL38-210ENST00000480203 CHD1O14646 1710 aa15.63■□□□□ 0.09
MRPL38-210ENST00000480203 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
MRPL38-210ENST00000480203 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
MRPL38-210ENST00000480203 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
MRPL38-210ENST00000480203 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
MRPL38-210ENST00000480203 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
MRPL38-210ENST00000480203 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
MRPL38-210ENST00000480203 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
MRPL38-210ENST00000480203 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
MRPL38-210ENST00000480203 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
MRPL38-210ENST00000480203 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
MRPL38-210ENST00000480203 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
MRPL38-210ENST00000480203 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
MRPL38-210ENST00000480203 FHAD1B1AJZ9 1412 aa15.39■□□□□ 0.05
MRPL38-210ENST00000480203 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
MRPL38-210ENST00000480203 NUP160Q12769 1436 aa15.34■□□□□ 0.05
MRPL38-210ENST00000480203 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
MRPL38-210ENST00000480203 ERICH3Q5RHP9 1530 aa15.32■□□□□ 0.04
MRPL38-210ENST00000480203 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
MRPL38-210ENST00000480203 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
MRPL38-210ENST00000480203 CEP170Q5SW79 1584 aa15.27■□□□□ 0.03
MRPL38-210ENST00000480203 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
MRPL38-210ENST00000480203 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
MRPL38-210ENST00000480203 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
MRPL38-210ENST00000480203 ERCC6L2Q5T890 1561 aa15.23■□□□□ 0.03
MRPL38-210ENST00000480203 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms