RNA–Protein interactions for RNA: ENST00000307980.6

RAD9A-201, Transcript of RAD9 checkpoint clamp component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD9A, Length 2,119 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-201ENST00000307980 NISCHQ9Y2I1 1504 aa50.75■■■■■ 5.71
RAD9A-201ENST00000307980 CCDC180Q9P1Z9 1646 aa44.05■■■■■ 4.64
RAD9A-201ENST00000307980 ZCCHC6Q5VYS8 1495 aaKnown RBP42.58■■■■■ 4.41
RAD9A-201ENST00000307980 DCAF8L2P0C7V8 631 aa42.21■■■■■ 4.35
RAD9A-201ENST00000307980 ABCC9O60706 1549 aa42.03■■■■■ 4.32
RAD9A-201ENST00000307980 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.28
RAD9A-201ENST00000307980 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
RAD9A-201ENST00000307980 MYO15BQ96JP2 1530 aa41.31■■■■■ 4.2
RAD9A-201ENST00000307980 NACADO15069 1562 aa41.13■■■■■ 4.17
RAD9A-201ENST00000307980 RB1CC1Q8TDY2 1594 aa40.79■■■■■ 4.12
RAD9A-201ENST00000307980 SCRIBQ14160 1630 aa40.74■■■■■ 4.11
RAD9A-201ENST00000307980 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
RAD9A-201ENST00000307980 SUPT5HO00267 1087 aaKnown RBP40.03■■■■■ 4
RAD9A-201ENST00000307980 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.964e-11■■■■■ 40
RAD9A-201ENST00000307980 BICRAQ9NZM4 1560 aa39.71■■■■□ 3.95
RAD9A-201ENST00000307980 CECR2Q9BXF3 1484 aa39.59■■■■□ 3.93
RAD9A-201ENST00000307980 RSF1Q96T23 1441 aaPredicted RBP39.44■■■■□ 3.9
RAD9A-201ENST00000307980 MROH2BQ7Z745 1585 aa39.29■■■■□ 3.88
RAD9A-201ENST00000307980 BAZ1AQ9NRL2 1556 aaPredicted RBP39.1■■■■□ 3.85
RAD9A-201ENST00000307980 SMARCA4P51532 1647 aa38.98■■■■□ 3.83
RAD9A-201ENST00000307980 WIZO95785 1651 aa38.95■■■■□ 3.83
RAD9A-201ENST00000307980 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
RAD9A-201ENST00000307980 PEG3Q9GZU2 1588 aa38.45■■■■□ 3.75
RAD9A-201ENST00000307980 ATAD2BQ9ULI0 1458 aa38.42■■■■□ 3.74
RAD9A-201ENST00000307980 TOP2AP11388 1531 aaKnown RBP38.41■■■■□ 3.74
RAD9A-201ENST00000307980 SMARCA2P51531 1590 aa38.26■■■■□ 3.72
RAD9A-201ENST00000307980 CHIC1Q5VXU3 224 aa38.26■■■■□ 3.71
RAD9A-201ENST00000307980 CCDC88BA6NC98 1476 aa38.17■■■■□ 3.7
RAD9A-201ENST00000307980 BAZ1BQ9UIG0 1483 aaKnown RBP38.15■■■■□ 3.7
RAD9A-201ENST00000307980 NCAPD3P42695 1498 aa38.06■■■■□ 3.68
RAD9A-201ENST00000307980 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
RAD9A-201ENST00000307980 HMGXB3Q12766 1538 aa37.89■■■■□ 3.66
RAD9A-201ENST00000307980 TRIM41Q8WV44 630 aa37.54■■■■□ 3.6
RAD9A-201ENST00000307980 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
RAD9A-201ENST00000307980 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
RAD9A-201ENST00000307980 CFTRP13569 1480 aa37.22■■■■□ 3.55
RAD9A-201ENST00000307980 CADPSQ9ULU8 1353 aa37.13■■■■□ 3.53
RAD9A-201ENST00000307980 WRNQ14191 1432 aaPredicted RBP eCLIP37.06■■■■□ 3.52
RAD9A-201ENST00000307980 FAM9AQ8IZU1 332 aaPredicted RBP37■■■■□ 3.51
RAD9A-201ENST00000307980 LOC105371045A0A1W2PR82 267 aa36.94■■■■□ 3.5
RAD9A-201ENST00000307980 SYNJ1O43426 1573 aa36.93■■■■□ 3.5
RAD9A-201ENST00000307980 NESP48681 1621 aa36.93■■■■□ 3.5
RAD9A-201ENST00000307980 PRDM2Q13029 1718 aa36.81■■■■□ 3.48
RAD9A-201ENST00000307980 SOGA1O94964 1423 aa36.73■■■■□ 3.47
RAD9A-201ENST00000307980 CUX1P39880 1505 aa36.71■■■■□ 3.47
RAD9A-201ENST00000307980 FANCD2Q9BXW9 1451 aa36.7■■■■□ 3.47
RAD9A-201ENST00000307980 TOP2BQ02880 1626 aa36.7■■■■□ 3.47
RAD9A-201ENST00000307980 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
RAD9A-201ENST00000307980 RUSC2Q8N2Y8 1516 aa36.63■■■■□ 3.46
RAD9A-201ENST00000307980 BIVM-ERCC5R4GMW8 1640 aa36.61■■■■□ 3.45
RAD9A-201ENST00000307980 EHMT2Q96KQ7 1210 aa36.58■■■■□ 3.45
RAD9A-201ENST00000307980 PDS5BQ9NTI5 1447 aa36.46■■■■□ 3.43
RAD9A-201ENST00000307980 CSRNP3Q8WYN3 585 aa36.41■■■■□ 3.42
RAD9A-201ENST00000307980 CEP164Q9UPV0 1460 aa36.4■■■■□ 3.42
RAD9A-201ENST00000307980 EEA1Q15075 1411 aa36.36■■■■□ 3.41
RAD9A-201ENST00000307980 KIF21AQ7Z4S6 1674 aa36.32■■■■□ 3.4
RAD9A-201ENST00000307980 FGD5Q6ZNL6 1462 aa36.29■■■■□ 3.4
RAD9A-201ENST00000307980 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
RAD9A-201ENST00000307980 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
RAD9A-201ENST00000307980 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
RAD9A-201ENST00000307980 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
RAD9A-201ENST00000307980 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
RAD9A-201ENST00000307980 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
RAD9A-201ENST00000307980 CUX2O14529 1486 aa36.06■■■■□ 3.36
RAD9A-201ENST00000307980 MRC2Q9UBG0 1479 aa35.98■■■■□ 3.35
RAD9A-201ENST00000307980 UBTFP17480 764 aaKnown RBP35.96■■■■□ 3.35
RAD9A-201ENST00000307980 GOLGA3Q08378 1498 aa35.93■■■■□ 3.34
RAD9A-201ENST00000307980 ERCC6Q03468 1493 aa35.93■■■■□ 3.34
RAD9A-201ENST00000307980 ABCA10Q8WWZ4 1543 aa35.92■■■■□ 3.34
RAD9A-201ENST00000307980 RAPGEF2Q9Y4G8 1499 aa35.92■■■■□ 3.34
RAD9A-201ENST00000307980 KIF21BO75037 1637 aa35.92■■■■□ 3.34
RAD9A-201ENST00000307980 IGF1RP08069 1367 aa35.91■■■■□ 3.34
RAD9A-201ENST00000307980 TNIKQ9UKE5 1360 aa35.88■■■■□ 3.33
RAD9A-201ENST00000307980 PRXQ9BXM0 1461 aa35.88■■■■□ 3.33
RAD9A-201ENST00000307980 TDRD9Q8NDG6 1382 aaKnown RBP35.8■■■■□ 3.32
RAD9A-201ENST00000307980 WDR62O43379 1518 aa35.78■■■■□ 3.32
RAD9A-201ENST00000307980 TARBP1Q13395 1621 aaKnown RBP35.74■■■■□ 3.31
RAD9A-201ENST00000307980 WDR97A6NE52 1622 aa35.73■■■■□ 3.31
RAD9A-201ENST00000307980 CEP162Q5TB80 1403 aa35.71■■■■□ 3.31
RAD9A-201ENST00000307980 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.3
RAD9A-201ENST00000307980 CARMIL1Q5VZK9 1371 aa35.68■■■■□ 3.3
RAD9A-201ENST00000307980 ERICH3Q5RHP9 1530 aa35.68■■■■□ 3.3
RAD9A-201ENST00000307980 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
RAD9A-201ENST00000307980 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
RAD9A-201ENST00000307980 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.285e-8■■■□□ 19
RAD9A-201ENST00000307980 RANGAP1P46060 587 aaPredicted RBP35.54■■■■□ 3.28
RAD9A-201ENST00000307980 IFT140Q96RY7 1462 aa35.53■■■■□ 3.28
RAD9A-201ENST00000307980 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
RAD9A-201ENST00000307980 CLIP1P30622 1438 aa35.43■■■■□ 3.26
RAD9A-201ENST00000307980 CUL7Q14999 1698 aa35.38■■■■□ 3.25
RAD9A-201ENST00000307980 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
RAD9A-201ENST00000307980 GRIN2BQ13224 1484 aa35.29■■■■□ 3.24
RAD9A-201ENST00000307980 PPARGC1BQ86YN6 1023 aaKnown RBP35.25■■■■□ 3.23
RAD9A-201ENST00000307980 EIF4G3O43432 1585 aaKnown RBP35.23■■■■□ 3.23
RAD9A-201ENST00000307980 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
RAD9A-201ENST00000307980 ARHGAP35Q9NRY4 1499 aa35.12■■■■□ 3.21
RAD9A-201ENST00000307980 ADAMTS12P58397 1594 aa35.12■■■■□ 3.21
RAD9A-201ENST00000307980 ARAP1Q96P48 1450 aa35.11■■■■□ 3.21
RAD9A-201ENST00000307980 SNAPC4Q5SXM2 1469 aa35.11■■■■□ 3.21
RAD9A-201ENST00000307980 PCGF6Q9BYE7 350 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms