RNA–Protein interactions for RNA: ENST00000307980.6

RAD9A-201, Transcript of RAD9 checkpoint clamp component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD9A, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-201ENST00000307980 NISCHQ9Y2I1 1504 aa50.75■■■■■ 5.71
RAD9A-201ENST00000307980 CCDC180Q9P1Z9 1646 aa44.05■■■■■ 4.64
RAD9A-201ENST00000307980 ZCCHC6Q5VYS8 1495 aaKnown RBP42.58■■■■■ 4.41
RAD9A-201ENST00000307980 DCAF8L2P0C7V8 631 aa42.21■■■■■ 4.35
RAD9A-201ENST00000307980 ABCC9O60706 1549 aa42.03■■■■■ 4.32
RAD9A-201ENST00000307980 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.28
RAD9A-201ENST00000307980 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
RAD9A-201ENST00000307980 MYO15BQ96JP2 1530 aa41.31■■■■■ 4.2
RAD9A-201ENST00000307980 NACADO15069 1562 aa41.13■■■■■ 4.17
RAD9A-201ENST00000307980 RB1CC1Q8TDY2 1594 aa40.79■■■■■ 4.12
RAD9A-201ENST00000307980 SCRIBQ14160 1630 aa40.74■■■■■ 4.11
RAD9A-201ENST00000307980 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
RAD9A-201ENST00000307980 SUPT5HO00267 1087 aaKnown RBP40.03■■■■■ 4
RAD9A-201ENST00000307980 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.964e-11■■■■■ 40
RAD9A-201ENST00000307980 BICRAQ9NZM4 1560 aa39.71■■■■□ 3.95
RAD9A-201ENST00000307980 CECR2Q9BXF3 1484 aa39.59■■■■□ 3.93
RAD9A-201ENST00000307980 RSF1Q96T23 1441 aaPredicted RBP39.44■■■■□ 3.9
RAD9A-201ENST00000307980 MROH2BQ7Z745 1585 aa39.29■■■■□ 3.88
RAD9A-201ENST00000307980 BAZ1AQ9NRL2 1556 aaPredicted RBP39.1■■■■□ 3.85
RAD9A-201ENST00000307980 SMARCA4P51532 1647 aa38.98■■■■□ 3.83
RAD9A-201ENST00000307980 WIZO95785 1651 aa38.95■■■■□ 3.83
RAD9A-201ENST00000307980 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
RAD9A-201ENST00000307980 PEG3Q9GZU2 1588 aa38.45■■■■□ 3.75
RAD9A-201ENST00000307980 ATAD2BQ9ULI0 1458 aa38.42■■■■□ 3.74
RAD9A-201ENST00000307980 TOP2AP11388 1531 aaKnown RBP38.41■■■■□ 3.74
RAD9A-201ENST00000307980 SMARCA2P51531 1590 aa38.26■■■■□ 3.72
RAD9A-201ENST00000307980 CHIC1Q5VXU3 224 aa38.26■■■■□ 3.71
RAD9A-201ENST00000307980 CCDC88BA6NC98 1476 aa38.17■■■■□ 3.7
RAD9A-201ENST00000307980 BAZ1BQ9UIG0 1483 aaKnown RBP38.15■■■■□ 3.7
RAD9A-201ENST00000307980 NCAPD3P42695 1498 aa38.06■■■■□ 3.68
RAD9A-201ENST00000307980 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
RAD9A-201ENST00000307980 HMGXB3Q12766 1538 aa37.89■■■■□ 3.66
RAD9A-201ENST00000307980 TRIM41Q8WV44 630 aa37.54■■■■□ 3.6
RAD9A-201ENST00000307980 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
RAD9A-201ENST00000307980 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
RAD9A-201ENST00000307980 CFTRP13569 1480 aa37.22■■■■□ 3.55
RAD9A-201ENST00000307980 CADPSQ9ULU8 1353 aa37.13■■■■□ 3.53
RAD9A-201ENST00000307980 WRNQ14191 1432 aaPredicted RBP eCLIP37.06■■■■□ 3.52
RAD9A-201ENST00000307980 FAM9AQ8IZU1 332 aaPredicted RBP37■■■■□ 3.51
RAD9A-201ENST00000307980 LOC105371045A0A1W2PR82 267 aa36.94■■■■□ 3.5
RAD9A-201ENST00000307980 SYNJ1O43426 1573 aa36.93■■■■□ 3.5
RAD9A-201ENST00000307980 NESP48681 1621 aa36.93■■■■□ 3.5
RAD9A-201ENST00000307980 PRDM2Q13029 1718 aa36.81■■■■□ 3.48
RAD9A-201ENST00000307980 SOGA1O94964 1423 aa36.73■■■■□ 3.47
RAD9A-201ENST00000307980 CUX1P39880 1505 aa36.71■■■■□ 3.47
RAD9A-201ENST00000307980 FANCD2Q9BXW9 1451 aa36.7■■■■□ 3.47
RAD9A-201ENST00000307980 TOP2BQ02880 1626 aa36.7■■■■□ 3.47
RAD9A-201ENST00000307980 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
RAD9A-201ENST00000307980 RUSC2Q8N2Y8 1516 aa36.63■■■■□ 3.46
RAD9A-201ENST00000307980 BIVM-ERCC5R4GMW8 1640 aa36.61■■■■□ 3.45
RAD9A-201ENST00000307980 EHMT2Q96KQ7 1210 aa36.58■■■■□ 3.45
RAD9A-201ENST00000307980 PDS5BQ9NTI5 1447 aa36.46■■■■□ 3.43
RAD9A-201ENST00000307980 CSRNP3Q8WYN3 585 aa36.41■■■■□ 3.42
RAD9A-201ENST00000307980 CEP164Q9UPV0 1460 aa36.4■■■■□ 3.42
RAD9A-201ENST00000307980 EEA1Q15075 1411 aa36.36■■■■□ 3.41
RAD9A-201ENST00000307980 KIF21AQ7Z4S6 1674 aa36.32■■■■□ 3.4
RAD9A-201ENST00000307980 FGD5Q6ZNL6 1462 aa36.29■■■■□ 3.4
RAD9A-201ENST00000307980 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
RAD9A-201ENST00000307980 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
RAD9A-201ENST00000307980 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
RAD9A-201ENST00000307980 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
RAD9A-201ENST00000307980 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
RAD9A-201ENST00000307980 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
RAD9A-201ENST00000307980 CUX2O14529 1486 aa36.06■■■■□ 3.36
RAD9A-201ENST00000307980 MRC2Q9UBG0 1479 aa35.98■■■■□ 3.35
RAD9A-201ENST00000307980 UBTFP17480 764 aaKnown RBP35.96■■■■□ 3.35
RAD9A-201ENST00000307980 GOLGA3Q08378 1498 aa35.93■■■■□ 3.34
RAD9A-201ENST00000307980 ERCC6Q03468 1493 aa35.93■■■■□ 3.34
RAD9A-201ENST00000307980 ABCA10Q8WWZ4 1543 aa35.92■■■■□ 3.34
RAD9A-201ENST00000307980 RAPGEF2Q9Y4G8 1499 aa35.92■■■■□ 3.34
RAD9A-201ENST00000307980 KIF21BO75037 1637 aa35.92■■■■□ 3.34
RAD9A-201ENST00000307980 IGF1RP08069 1367 aa35.91■■■■□ 3.34
RAD9A-201ENST00000307980 TNIKQ9UKE5 1360 aa35.88■■■■□ 3.33
RAD9A-201ENST00000307980 PRXQ9BXM0 1461 aa35.88■■■■□ 3.33
RAD9A-201ENST00000307980 TDRD9Q8NDG6 1382 aaKnown RBP35.8■■■■□ 3.32
RAD9A-201ENST00000307980 WDR62O43379 1518 aa35.78■■■■□ 3.32
RAD9A-201ENST00000307980 TARBP1Q13395 1621 aaKnown RBP35.74■■■■□ 3.31
RAD9A-201ENST00000307980 WDR97A6NE52 1622 aa35.73■■■■□ 3.31
RAD9A-201ENST00000307980 CEP162Q5TB80 1403 aa35.71■■■■□ 3.31
RAD9A-201ENST00000307980 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.3
RAD9A-201ENST00000307980 CARMIL1Q5VZK9 1371 aa35.68■■■■□ 3.3
RAD9A-201ENST00000307980 ERICH3Q5RHP9 1530 aa35.68■■■■□ 3.3
RAD9A-201ENST00000307980 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
RAD9A-201ENST00000307980 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
RAD9A-201ENST00000307980 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.285e-8■■■□□ 19
RAD9A-201ENST00000307980 RANGAP1P46060 587 aaPredicted RBP35.54■■■■□ 3.28
RAD9A-201ENST00000307980 IFT140Q96RY7 1462 aa35.53■■■■□ 3.28
RAD9A-201ENST00000307980 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
RAD9A-201ENST00000307980 CLIP1P30622 1438 aa35.43■■■■□ 3.26
RAD9A-201ENST00000307980 CUL7Q14999 1698 aa35.38■■■■□ 3.25
RAD9A-201ENST00000307980 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
RAD9A-201ENST00000307980 GRIN2BQ13224 1484 aa35.29■■■■□ 3.24
RAD9A-201ENST00000307980 PPARGC1BQ86YN6 1023 aaKnown RBP35.25■■■■□ 3.23
RAD9A-201ENST00000307980 EIF4G3O43432 1585 aaKnown RBP35.23■■■■□ 3.23
RAD9A-201ENST00000307980 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
RAD9A-201ENST00000307980 ARHGAP35Q9NRY4 1499 aa35.12■■■■□ 3.21
RAD9A-201ENST00000307980 ADAMTS12P58397 1594 aa35.12■■■■□ 3.21
RAD9A-201ENST00000307980 ARAP1Q96P48 1450 aa35.11■■■■□ 3.21
RAD9A-201ENST00000307980 SNAPC4Q5SXM2 1469 aa35.11■■■■□ 3.21
RAD9A-201ENST00000307980 PCGF6Q9BYE7 350 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms