RNA–Protein interactions for RNA: ENST00000479419.1

IFT172-212, Transcript of intraflagellar transport 172, humanhuman

TSL 3

Gene IFT172, Length 420 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-212ENST00000479419 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
IFT172-212ENST00000479419 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.27
IFT172-212ENST00000479419 ABCC9O60706 1549 aa28.36■■■□□ 2.13
IFT172-212ENST00000479419 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■■□□ 2
IFT172-212ENST00000479419 NACADO15069 1562 aa27.34■■□□□ 1.97
IFT172-212ENST00000479419 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
IFT172-212ENST00000479419 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
IFT172-212ENST00000479419 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
IFT172-212ENST00000479419 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
IFT172-212ENST00000479419 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
IFT172-212ENST00000479419 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
IFT172-212ENST00000479419 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
IFT172-212ENST00000479419 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.831e-15■■■■■ 53.6
IFT172-212ENST00000479419 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
IFT172-212ENST00000479419 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
IFT172-212ENST00000479419 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
IFT172-212ENST00000479419 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
IFT172-212ENST00000479419 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
IFT172-212ENST00000479419 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
IFT172-212ENST00000479419 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
IFT172-212ENST00000479419 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
IFT172-212ENST00000479419 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
IFT172-212ENST00000479419 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
IFT172-212ENST00000479419 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
IFT172-212ENST00000479419 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
IFT172-212ENST00000479419 WIZO95785 1651 aa25.17■■□□□ 1.62
IFT172-212ENST00000479419 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
IFT172-212ENST00000479419 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
IFT172-212ENST00000479419 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
IFT172-212ENST00000479419 TOP2AP11388 1531 aaKnown RBP24.89■■□□□ 1.57
IFT172-212ENST00000479419 NESP48681 1621 aa24.64■■□□□ 1.54
IFT172-212ENST00000479419 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
IFT172-212ENST00000479419 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
IFT172-212ENST00000479419 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
IFT172-212ENST00000479419 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
IFT172-212ENST00000479419 CFTRP13569 1480 aa24.41■■□□□ 1.5
IFT172-212ENST00000479419 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
IFT172-212ENST00000479419 ERCC6Q03468 1493 aa24.36■■□□□ 1.49
IFT172-212ENST00000479419 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
IFT172-212ENST00000479419 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
IFT172-212ENST00000479419 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
IFT172-212ENST00000479419 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
IFT172-212ENST00000479419 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
IFT172-212ENST00000479419 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
IFT172-212ENST00000479419 WDR62O43379 1518 aa24.07■■□□□ 1.44
IFT172-212ENST00000479419 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
IFT172-212ENST00000479419 CUX2O14529 1486 aa24.03■■□□□ 1.44
IFT172-212ENST00000479419 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
IFT172-212ENST00000479419 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
IFT172-212ENST00000479419 CUX1P39880 1505 aa23.84■■□□□ 1.41
IFT172-212ENST00000479419 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
IFT172-212ENST00000479419 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
IFT172-212ENST00000479419 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
IFT172-212ENST00000479419 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
IFT172-212ENST00000479419 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
IFT172-212ENST00000479419 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
IFT172-212ENST00000479419 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
IFT172-212ENST00000479419 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
IFT172-212ENST00000479419 IFT140Q96RY7 1462 aa23.65■■□□□ 1.38
IFT172-212ENST00000479419 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
IFT172-212ENST00000479419 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
IFT172-212ENST00000479419 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
IFT172-212ENST00000479419 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
IFT172-212ENST00000479419 SOGA1O94964 1423 aa23.54■■□□□ 1.36
IFT172-212ENST00000479419 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
IFT172-212ENST00000479419 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.34
IFT172-212ENST00000479419 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
IFT172-212ENST00000479419 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
IFT172-212ENST00000479419 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
IFT172-212ENST00000479419 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
IFT172-212ENST00000479419 GRIN2BQ13224 1484 aa23.27■■□□□ 1.32
IFT172-212ENST00000479419 SNAPC4Q5SXM2 1469 aa23.27■■□□□ 1.32
IFT172-212ENST00000479419 CHD1O14646 1710 aa23.22■■□□□ 1.31
IFT172-212ENST00000479419 MAGI1Q96QZ7 1491 aaPredicted RBP23.19■■□□□ 1.3
IFT172-212ENST00000479419 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
IFT172-212ENST00000479419 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
IFT172-212ENST00000479419 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
IFT172-212ENST00000479419 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
IFT172-212ENST00000479419 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
IFT172-212ENST00000479419 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
IFT172-212ENST00000479419 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
IFT172-212ENST00000479419 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
IFT172-212ENST00000479419 IGF1RP08069 1367 aa23.02■■□□□ 1.28
IFT172-212ENST00000479419 FBLN2P98095 1184 aa23.02■■□□□ 1.28
IFT172-212ENST00000479419 CUL7Q14999 1698 aa23.02■■□□□ 1.28
IFT172-212ENST00000479419 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
IFT172-212ENST00000479419 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
IFT172-212ENST00000479419 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
IFT172-212ENST00000479419 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
IFT172-212ENST00000479419 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
IFT172-212ENST00000479419 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
IFT172-212ENST00000479419 NUP160Q12769 1436 aa22.9■■□□□ 1.26
IFT172-212ENST00000479419 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
IFT172-212ENST00000479419 EEA1Q15075 1411 aa22.81■■□□□ 1.24
IFT172-212ENST00000479419 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
IFT172-212ENST00000479419 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
IFT172-212ENST00000479419 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
IFT172-212ENST00000479419 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
IFT172-212ENST00000479419 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
IFT172-212ENST00000479419 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms