RNA–Protein interactions for RNA: ENST00000395117.6

RASSF1-204, Transcript of Ras association domain family member 1, humanhuman

TSL 2

Gene RASSF1, Length 1,745 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF1-204ENST00000395117 NISCHQ9Y2I1 1504 aa43.17■■■■■ 4.5
RASSF1-204ENST00000395117 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
RASSF1-204ENST00000395117 ABCC9O60706 1549 aa36.53■■■■□ 3.44
RASSF1-204ENST00000395117 ZCCHC6Q5VYS8 1495 aaKnown RBP36.1■■■■□ 3.37
RASSF1-204ENST00000395117 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
RASSF1-204ENST00000395117 DCAF1Q9Y4B6 1507 aa35.69■■■■□ 3.3
RASSF1-204ENST00000395117 MYO15BQ96JP2 1530 aa35.54■■■■□ 3.28
RASSF1-204ENST00000395117 NACADO15069 1562 aa35.52■■■■□ 3.28
RASSF1-204ENST00000395117 RB1CC1Q8TDY2 1594 aa35.36■■■■□ 3.25
RASSF1-204ENST00000395117 SCRIBQ14160 1630 aa34.77■■■■□ 3.16
RASSF1-204ENST00000395117 SHROOM4Q9ULL8 1493 aa34.72■■■■□ 3.15
RASSF1-204ENST00000395117 UNC13AQ9UPW8 1703 aa34.6■■■■□ 3.13
RASSF1-204ENST00000395117 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.094e-12■■■■■ 42.1
RASSF1-204ENST00000395117 BICRAQ9NZM4 1560 aa34.34■■■■□ 3.09
RASSF1-204ENST00000395117 CECR2Q9BXF3 1484 aa33.63■■■□□ 2.97
RASSF1-204ENST00000395117 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
RASSF1-204ENST00000395117 EIF4G1Q04637 1599 aaKnown RBP33.35■■■□□ 2.93
RASSF1-204ENST00000395117 MROH2BQ7Z745 1585 aa33.33■■■□□ 2.93
RASSF1-204ENST00000395117 SMARCA4P51532 1647 aa33.3■■■□□ 2.92
RASSF1-204ENST00000395117 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
RASSF1-204ENST00000395117 SUPT5HO00267 1087 aaKnown RBP33.09■■■□□ 2.89
RASSF1-204ENST00000395117 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
RASSF1-204ENST00000395117 WIZO95785 1651 aa32.99■■■□□ 2.87
RASSF1-204ENST00000395117 ATAD2BQ9ULI0 1458 aa32.97■■■□□ 2.87
RASSF1-204ENST00000395117 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
RASSF1-204ENST00000395117 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
RASSF1-204ENST00000395117 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
RASSF1-204ENST00000395117 NCAPD3P42695 1498 aa32.83■■■□□ 2.85
RASSF1-204ENST00000395117 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
RASSF1-204ENST00000395117 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
RASSF1-204ENST00000395117 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
RASSF1-204ENST00000395117 CCDC88BA6NC98 1476 aa32.32■■■□□ 2.76
RASSF1-204ENST00000395117 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.7
RASSF1-204ENST00000395117 CFTRP13569 1480 aa31.89■■■□□ 2.7
RASSF1-204ENST00000395117 NESP48681 1621 aa31.87■■■□□ 2.69
RASSF1-204ENST00000395117 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
RASSF1-204ENST00000395117 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
RASSF1-204ENST00000395117 PRDM2Q13029 1718 aa31.57■■■□□ 2.64
RASSF1-204ENST00000395117 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
RASSF1-204ENST00000395117 KIF21AQ7Z4S6 1674 aa31.42■■■□□ 2.62
RASSF1-204ENST00000395117 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
RASSF1-204ENST00000395117 ABCC8Q09428 1581 aa31.38■■■□□ 2.61
RASSF1-204ENST00000395117 ERCC6Q03468 1493 aa31.38■■■□□ 2.61
RASSF1-204ENST00000395117 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
RASSF1-204ENST00000395117 WRNQ14191 1432 aaPredicted RBP eCLIP31.29■■■□□ 2.6
RASSF1-204ENST00000395117 URB2Q14146 1524 aaKnown RBP31.2■■■□□ 2.59
RASSF1-204ENST00000395117 CUX1P39880 1505 aa31.19■■■□□ 2.58
RASSF1-204ENST00000395117 MRC2Q9UBG0 1479 aa31.19■■■□□ 2.58
RASSF1-204ENST00000395117 TRIM41Q8WV44 630 aa31.17■■■□□ 2.58
RASSF1-204ENST00000395117 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
RASSF1-204ENST00000395117 TOPBP1Q92547 1522 aa31.13■■■□□ 2.57
RASSF1-204ENST00000395117 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
RASSF1-204ENST00000395117 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
RASSF1-204ENST00000395117 TOP2BQ02880 1626 aa31.09■■■□□ 2.57
RASSF1-204ENST00000395117 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
RASSF1-204ENST00000395117 WDR62O43379 1518 aa31.05■■■□□ 2.56
RASSF1-204ENST00000395117 FGD5Q6ZNL6 1462 aa30.96■■■□□ 2.55
RASSF1-204ENST00000395117 POLA1P09884 1462 aaPredicted RBP30.93■■■□□ 2.54
RASSF1-204ENST00000395117 SOGA1O94964 1423 aa30.84■■■□□ 2.53
RASSF1-204ENST00000395117 CUX2O14529 1486 aa30.84■■■□□ 2.53
RASSF1-204ENST00000395117 RAD54L2Q9Y4B4 1467 aa30.84■■■□□ 2.53
RASSF1-204ENST00000395117 TARBP1Q13395 1621 aaKnown RBP30.71■■■□□ 2.51
RASSF1-204ENST00000395117 IFT140Q96RY7 1462 aa30.71■■■□□ 2.51
RASSF1-204ENST00000395117 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
RASSF1-204ENST00000395117 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
RASSF1-204ENST00000395117 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
RASSF1-204ENST00000395117 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
RASSF1-204ENST00000395117 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
RASSF1-204ENST00000395117 FAM9AQ8IZU1 332 aaPredicted RBP30.57■■■□□ 2.48
RASSF1-204ENST00000395117 KIF27Q86VH2 1401 aa30.56■■■□□ 2.48
RASSF1-204ENST00000395117 AQRO60306 1485 aaKnown RBP eCLIP30.54■■■□□ 2.482e-6■■■■□ 21.3
RASSF1-204ENST00000395117 GAPVD1Q14C86 1478 aa30.48■■■□□ 2.47
RASSF1-204ENST00000395117 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.47
RASSF1-204ENST00000395117 EEA1Q15075 1411 aa30.44■■■□□ 2.46
RASSF1-204ENST00000395117 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
RASSF1-204ENST00000395117 IGF1RP08069 1367 aa30.42■■■□□ 2.46
RASSF1-204ENST00000395117 EIF4G3O43432 1585 aaKnown RBP30.4■■■□□ 2.46
RASSF1-204ENST00000395117 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
RASSF1-204ENST00000395117 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
RASSF1-204ENST00000395117 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
RASSF1-204ENST00000395117 CARMIL1Q5VZK9 1371 aa30.23■■■□□ 2.43
RASSF1-204ENST00000395117 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
RASSF1-204ENST00000395117 PRXQ9BXM0 1461 aa30.19■■■□□ 2.42
RASSF1-204ENST00000395117 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
RASSF1-204ENST00000395117 MAGI1Q96QZ7 1491 aaPredicted RBP30.15■■■□□ 2.42
RASSF1-204ENST00000395117 FHAD1B1AJZ9 1412 aa30.13■■■□□ 2.41
RASSF1-204ENST00000395117 CUL7Q14999 1698 aa30.13■■■□□ 2.41
RASSF1-204ENST00000395117 LOC105371045A0A1W2PR82 267 aa30.12■■■□□ 2.41
RASSF1-204ENST00000395117 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
RASSF1-204ENST00000395117 RAPGEF2Q9Y4G8 1499 aa30.09■■■□□ 2.41
RASSF1-204ENST00000395117 FBLN2P98095 1184 aa30.06■■■□□ 2.4
RASSF1-204ENST00000395117 CHMP7Q8WUX9 453 aaPredicted RBP30.06■■■□□ 2.4
RASSF1-204ENST00000395117 KIF21BO75037 1637 aa30.06■■■□□ 2.4
RASSF1-204ENST00000395117 SYNJ2O15056 1496 aa30.05■■■□□ 2.4
RASSF1-204ENST00000395117 GOLGA3Q08378 1498 aa29.98■■■□□ 2.39
RASSF1-204ENST00000395117 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
RASSF1-204ENST00000395117 UBTFP17480 764 aaKnown RBP29.95■■■□□ 2.38
RASSF1-204ENST00000395117 CHD1O14646 1710 aa29.87■■■□□ 2.37
RASSF1-204ENST00000395117 TNIKQ9UKE5 1360 aa29.8■■■□□ 2.36
RASSF1-204ENST00000395117 NUP160Q12769 1436 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms