RNA–Protein interactions for RNA: ENST00000482447.1

RASSF1-207, Transcript of Ras association domain family member 1, humanhuman

TSL 1 (best)

Gene RASSF1, Length 1,711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF1-207ENST00000482447 NISCHQ9Y2I1 1504 aa51.82■■■■■ 5.89
RASSF1-207ENST00000482447 CCDC180Q9P1Z9 1646 aa45.6■■■■■ 4.89
RASSF1-207ENST00000482447 ABCC9O60706 1549 aa43.96■■■■■ 4.63
RASSF1-207ENST00000482447 ZCCHC6Q5VYS8 1495 aaKnown RBP43.35■■■■■ 4.53
RASSF1-207ENST00000482447 DCAF8L2P0C7V8 631 aa43.13■■■■■ 4.49
RASSF1-207ENST00000482447 DCAF1Q9Y4B6 1507 aa42.82■■■■■ 4.45
RASSF1-207ENST00000482447 NACADO15069 1562 aa42.68■■■■■ 4.42
RASSF1-207ENST00000482447 MYO15BQ96JP2 1530 aa42.64■■■■■ 4.42
RASSF1-207ENST00000482447 RB1CC1Q8TDY2 1594 aa42.54■■■■■ 4.4
RASSF1-207ENST00000482447 SCRIBQ14160 1630 aa41.84■■■■■ 4.29
RASSF1-207ENST00000482447 SHROOM4Q9ULL8 1493 aa41.69■■■■■ 4.26
RASSF1-207ENST00000482447 UNC13AQ9UPW8 1703 aa41.65■■■■■ 4.26
RASSF1-207ENST00000482447 PABPN1Q86U42 306 aaKnown RBP eCLIP41.27■■■■■ 4.24e-12■■■■■ 42.1
RASSF1-207ENST00000482447 BICRAQ9NZM4 1560 aa41.26■■■■■ 4.2
RASSF1-207ENST00000482447 CECR2Q9BXF3 1484 aa40.35■■■■■ 4.05
RASSF1-207ENST00000482447 EIF4G1Q04637 1599 aaKnown RBP40.11■■■■■ 4.01
RASSF1-207ENST00000482447 BAZ1AQ9NRL2 1556 aaPredicted RBP40.08■■■■■ 4.01
RASSF1-207ENST00000482447 SMARCA4P51532 1647 aa40.03■■■■■ 4
RASSF1-207ENST00000482447 MROH2BQ7Z745 1585 aa40.01■■■■□ 3.99
RASSF1-207ENST00000482447 RSF1Q96T23 1441 aaPredicted RBP39.85■■■■□ 3.97
RASSF1-207ENST00000482447 CC2D2AQ9P2K1 1620 aa39.74■■■■□ 3.95
RASSF1-207ENST00000482447 SUPT5HO00267 1087 aaKnown RBP39.65■■■■□ 3.94
RASSF1-207ENST00000482447 WIZO95785 1651 aa39.64■■■■□ 3.94
RASSF1-207ENST00000482447 ATAD2BQ9ULI0 1458 aa39.59■■■■□ 3.93
RASSF1-207ENST00000482447 DNAJC5BQ9UF47 199 aa39.57■■■■□ 3.92
RASSF1-207ENST00000482447 PEG3Q9GZU2 1588 aa39.56■■■■□ 3.92
RASSF1-207ENST00000482447 SMARCA2P51531 1590 aa39.54■■■■□ 3.92
RASSF1-207ENST00000482447 NCAPD3P42695 1498 aa39.39■■■■□ 3.9
RASSF1-207ENST00000482447 BAZ1BQ9UIG0 1483 aaKnown RBP39.33■■■■□ 3.89
RASSF1-207ENST00000482447 HMGXB3Q12766 1538 aa39.27■■■■□ 3.88
RASSF1-207ENST00000482447 TOP2AP11388 1531 aaKnown RBP39.2■■■■□ 3.87
RASSF1-207ENST00000482447 CCDC88BA6NC98 1476 aa38.78■■■■□ 3.8
RASSF1-207ENST00000482447 CADPSQ9ULU8 1353 aa38.33■■■■□ 3.73
RASSF1-207ENST00000482447 NESP48681 1621 aa38.3■■■■□ 3.72
RASSF1-207ENST00000482447 CFTRP13569 1480 aa38.28■■■■□ 3.72
RASSF1-207ENST00000482447 LAMC3Q9Y6N6 1575 aa38.21■■■■□ 3.71
RASSF1-207ENST00000482447 PRDM2Q13029 1718 aa38.03■■■■□ 3.68
RASSF1-207ENST00000482447 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
RASSF1-207ENST00000482447 FANCD2Q9BXW9 1451 aa37.92■■■■□ 3.66
RASSF1-207ENST00000482447 KIF21AQ7Z4S6 1674 aa37.84■■■■□ 3.65
RASSF1-207ENST00000482447 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
RASSF1-207ENST00000482447 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
RASSF1-207ENST00000482447 ABCC8Q09428 1581 aa37.7■■■■□ 3.63
RASSF1-207ENST00000482447 WRNQ14191 1432 aaPredicted RBP eCLIP37.56■■■■□ 3.6
RASSF1-207ENST00000482447 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
RASSF1-207ENST00000482447 URB2Q14146 1524 aaKnown RBP37.49■■■■□ 3.59
RASSF1-207ENST00000482447 CUX1P39880 1505 aa37.47■■■■□ 3.59
RASSF1-207ENST00000482447 CHIC1Q5VXU3 224 aa37.46■■■■□ 3.59
RASSF1-207ENST00000482447 THOC2Q8NI27 1593 aaKnown RBP37.44■■■■□ 3.58
RASSF1-207ENST00000482447 SYNJ1O43426 1573 aa37.44■■■■□ 3.58
RASSF1-207ENST00000482447 DNMBPQ6XZF7 1577 aa37.41■■■■□ 3.58
RASSF1-207ENST00000482447 TOPBP1Q92547 1522 aa37.4■■■■□ 3.58
RASSF1-207ENST00000482447 WDR62O43379 1518 aa37.34■■■■□ 3.57
RASSF1-207ENST00000482447 TOP2BQ02880 1626 aa37.34■■■■□ 3.57
RASSF1-207ENST00000482447 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
RASSF1-207ENST00000482447 BIVM-ERCC5R4GMW8 1640 aa37.31■■■■□ 3.56
RASSF1-207ENST00000482447 FGD5Q6ZNL6 1462 aa37.2■■■■□ 3.55
RASSF1-207ENST00000482447 POLA1P09884 1462 aaPredicted RBP37.16■■■■□ 3.54
RASSF1-207ENST00000482447 CUX2O14529 1486 aa37.04■■■■□ 3.52
RASSF1-207ENST00000482447 RAD54L2Q9Y4B4 1467 aa37.04■■■■□ 3.52
RASSF1-207ENST00000482447 SOGA1O94964 1423 aa37.02■■■■□ 3.52
RASSF1-207ENST00000482447 IFT140Q96RY7 1462 aa36.91■■■■□ 3.5
RASSF1-207ENST00000482447 TARBP1Q13395 1621 aaKnown RBP36.91■■■■□ 3.5
RASSF1-207ENST00000482447 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
RASSF1-207ENST00000482447 WDR97A6NE52 1622 aa36.8■■■■□ 3.48
RASSF1-207ENST00000482447 TDRD9Q8NDG6 1382 aaKnown RBP36.76■■■■□ 3.47
RASSF1-207ENST00000482447 ZNF608Q9ULD9 1512 aaPredicted RBP36.76■■■■□ 3.47
RASSF1-207ENST00000482447 RUSC2Q8N2Y8 1516 aa36.71■■■■□ 3.47
RASSF1-207ENST00000482447 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
RASSF1-207ENST00000482447 AQRO60306 1485 aaKnown RBP eCLIP36.67■■■■□ 3.462e-6■■■■□ 21.3
RASSF1-207ENST00000482447 FAM9AQ8IZU1 332 aaPredicted RBP36.65■■■■□ 3.46
RASSF1-207ENST00000482447 ABCA5Q8WWZ7 1642 aa36.62■■■■□ 3.45
RASSF1-207ENST00000482447 EIF4G3O43432 1585 aaKnown RBP36.61■■■■□ 3.45
RASSF1-207ENST00000482447 GAPVD1Q14C86 1478 aa36.6■■■■□ 3.45
RASSF1-207ENST00000482447 EEA1Q15075 1411 aa36.51■■■■□ 3.44
RASSF1-207ENST00000482447 PBRM1Q86U86 1689 aa36.46■■■■□ 3.43
RASSF1-207ENST00000482447 GRIN2BQ13224 1484 aa36.45■■■■□ 3.43
RASSF1-207ENST00000482447 IGF1RP08069 1367 aa36.43■■■■□ 3.42
RASSF1-207ENST00000482447 CSRNP3Q8WYN3 585 aa36.42■■■■□ 3.42
RASSF1-207ENST00000482447 ERICH3Q5RHP9 1530 aa36.4■■■■□ 3.42
RASSF1-207ENST00000482447 SNAPC4Q5SXM2 1469 aa36.33■■■■□ 3.41
RASSF1-207ENST00000482447 CARMIL1Q5VZK9 1371 aa36.25■■■■□ 3.39
RASSF1-207ENST00000482447 MAGI1Q96QZ7 1491 aaPredicted RBP36.24■■■■□ 3.39
RASSF1-207ENST00000482447 CUL7Q14999 1698 aa36.24■■■■□ 3.39
RASSF1-207ENST00000482447 ADAMTS12P58397 1594 aa36.22■■■■□ 3.39
RASSF1-207ENST00000482447 EHMT2Q96KQ7 1210 aa36.2■■■■□ 3.38
RASSF1-207ENST00000482447 PRXQ9BXM0 1461 aa36.19■■■■□ 3.38
RASSF1-207ENST00000482447 FHAD1B1AJZ9 1412 aa36.18■■■■□ 3.38
RASSF1-207ENST00000482447 FBLN2P98095 1184 aa36.12■■■■□ 3.37
RASSF1-207ENST00000482447 SYNJ2O15056 1496 aa36.11■■■■□ 3.37
RASSF1-207ENST00000482447 RAPGEF2Q9Y4G8 1499 aa36.11■■■■□ 3.37
RASSF1-207ENST00000482447 KIF21BO75037 1637 aa36.1■■■■□ 3.37
RASSF1-207ENST00000482447 CHMP7Q8WUX9 453 aaPredicted RBP36.09■■■■□ 3.37
RASSF1-207ENST00000482447 LOC105371045A0A1W2PR82 267 aa36.01■■■■□ 3.36
RASSF1-207ENST00000482447 GRIN2AQ12879 1464 aa36■■■■□ 3.35
RASSF1-207ENST00000482447 CHD1O14646 1710 aa36■■■■□ 3.35
RASSF1-207ENST00000482447 GOLGA3Q08378 1498 aa35.99■■■■□ 3.35
RASSF1-207ENST00000482447 UBTFP17480 764 aaKnown RBP35.91■■■■□ 3.34
RASSF1-207ENST00000482447 CEP170Q5SW79 1584 aa35.8■■■■□ 3.32
RASSF1-207ENST00000482447 NUP160Q12769 1436 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms