RNA–Protein interactions for RNA: ENST00000538013.5

RAD9A-205, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 5

Gene RAD9A, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-205ENST00000538013 NISCHQ9Y2I1 1504 aa47.38■■■■■ 5.18
RAD9A-205ENST00000538013 CCDC180Q9P1Z9 1646 aa42.51■■■■■ 4.4
RAD9A-205ENST00000538013 ABCC9O60706 1549 aa42.29■■■■■ 4.36
RAD9A-205ENST00000538013 RB1CC1Q8TDY2 1594 aa40.36■■■■■ 4.05
RAD9A-205ENST00000538013 NACADO15069 1562 aa40.13■■■■■ 4.01
RAD9A-205ENST00000538013 DCAF8L2P0C7V8 631 aa39.79■■■■□ 3.96
RAD9A-205ENST00000538013 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
RAD9A-205ENST00000538013 DNAJC5BQ9UF47 199 aa39.56■■■■□ 3.92
RAD9A-205ENST00000538013 UNC13AQ9UPW8 1703 aa39.5■■■■□ 3.91
RAD9A-205ENST00000538013 PABPN1Q86U42 306 aaKnown RBP eCLIP39.35■■■■□ 3.894e-11■■■■■ 40
RAD9A-205ENST00000538013 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
RAD9A-205ENST00000538013 BICRAQ9NZM4 1560 aa39.21■■■■□ 3.87
RAD9A-205ENST00000538013 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
RAD9A-205ENST00000538013 SHROOM4Q9ULL8 1493 aa38.72■■■■□ 3.79
RAD9A-205ENST00000538013 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
RAD9A-205ENST00000538013 CC2D2AQ9P2K1 1620 aa38.26■■■■□ 3.71
RAD9A-205ENST00000538013 EIF4G1Q04637 1599 aaKnown RBP38.22■■■■□ 3.71
RAD9A-205ENST00000538013 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
RAD9A-205ENST00000538013 NCAPD3P42695 1498 aa37.03■■■■□ 3.52
RAD9A-205ENST00000538013 SMARCA4P51532 1647 aa36.94■■■■□ 3.5
RAD9A-205ENST00000538013 ATAD2BQ9ULI0 1458 aa36.93■■■■□ 3.5
RAD9A-205ENST00000538013 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
RAD9A-205ENST00000538013 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
RAD9A-205ENST00000538013 BAZ1AQ9NRL2 1556 aaPredicted RBP36.77■■■■□ 3.48
RAD9A-205ENST00000538013 PEG3Q9GZU2 1588 aa36.62■■■■□ 3.45
RAD9A-205ENST00000538013 BAZ1BQ9UIG0 1483 aaKnown RBP36.56■■■■□ 3.44
RAD9A-205ENST00000538013 ERCC6Q03468 1493 aa36.5■■■■□ 3.43
RAD9A-205ENST00000538013 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
RAD9A-205ENST00000538013 CUX2O14529 1486 aa36.44■■■■□ 3.42
RAD9A-205ENST00000538013 NESP48681 1621 aa36.38■■■■□ 3.41
RAD9A-205ENST00000538013 DNAJC5Q9H3Z4 198 aa36.24■■■■□ 3.39
RAD9A-205ENST00000538013 LAMC3Q9Y6N6 1575 aa36.19■■■■□ 3.38
RAD9A-205ENST00000538013 WIZO95785 1651 aa36.07■■■■□ 3.37
RAD9A-205ENST00000538013 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
RAD9A-205ENST00000538013 KIF21AQ7Z4S6 1674 aa35.96■■■■□ 3.35
RAD9A-205ENST00000538013 PDS5BQ9NTI5 1447 aa35.94■■■■□ 3.34
RAD9A-205ENST00000538013 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
RAD9A-205ENST00000538013 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
RAD9A-205ENST00000538013 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
RAD9A-205ENST00000538013 MRC2Q9UBG0 1479 aa35.63■■■■□ 3.29
RAD9A-205ENST00000538013 WDR62O43379 1518 aa35.57■■■■□ 3.29
RAD9A-205ENST00000538013 CFTRP13569 1480 aa35.54■■■■□ 3.28
RAD9A-205ENST00000538013 CEP164Q9UPV0 1460 aa35.52■■■■□ 3.28
RAD9A-205ENST00000538013 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
RAD9A-205ENST00000538013 PRDM2Q13029 1718 aa35.24■■■■□ 3.23
RAD9A-205ENST00000538013 CCDC88BA6NC98 1476 aa35.2■■■■□ 3.23
RAD9A-205ENST00000538013 URB2Q14146 1524 aaKnown RBP35.2■■■■□ 3.23
RAD9A-205ENST00000538013 TOPBP1Q92547 1522 aa34.84■■■■□ 3.17
RAD9A-205ENST00000538013 IFT140Q96RY7 1462 aa34.81■■■■□ 3.16
RAD9A-205ENST00000538013 ABCC8Q09428 1581 aa34.79■■■■□ 3.16
RAD9A-205ENST00000538013 OSCARQ8IYS5 282 aa34.74■■■■□ 3.15
RAD9A-205ENST00000538013 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
RAD9A-205ENST00000538013 ZNF608Q9ULD9 1512 aaPredicted RBP34.73■■■■□ 3.15
RAD9A-205ENST00000538013 TRIM41Q8WV44 630 aa34.63■■■■□ 3.13
RAD9A-205ENST00000538013 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.13
RAD9A-205ENST00000538013 TARBP1Q13395 1621 aaKnown RBP34.55■■■■□ 3.12
RAD9A-205ENST00000538013 POLA1P09884 1462 aaPredicted RBP34.49■■■■□ 3.11
RAD9A-205ENST00000538013 AQRO60306 1485 aaKnown RBP eCLIP34.41■■■■□ 3.15e-8■■■□□ 19
RAD9A-205ENST00000538013 RIMBP3CA6NJZ7 1639 aa34.33■■■■□ 3.09
RAD9A-205ENST00000538013 RIMBP3BA6NNM3 1639 aa34.33■■■■□ 3.09
RAD9A-205ENST00000538013 RIMBP3Q9UFD9 1639 aa34.33■■■■□ 3.09
RAD9A-205ENST00000538013 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
RAD9A-205ENST00000538013 SOGA1O94964 1423 aa34.3■■■■□ 3.08
RAD9A-205ENST00000538013 CHD1O14646 1710 aa34.3■■■■□ 3.08
RAD9A-205ENST00000538013 CUX1P39880 1505 aa34.29■■■■□ 3.08
RAD9A-205ENST00000538013 FGD5Q6ZNL6 1462 aa34.28■■■■□ 3.08
RAD9A-205ENST00000538013 WDR97A6NE52 1622 aa34.23■■■■□ 3.07
RAD9A-205ENST00000538013 ARHGEF11O15085 1522 aa34.23■■■■□ 3.07
RAD9A-205ENST00000538013 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
RAD9A-205ENST00000538013 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
RAD9A-205ENST00000538013 FBLN2P98095 1184 aa34.09■■■■□ 3.05
RAD9A-205ENST00000538013 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
RAD9A-205ENST00000538013 MAGI1Q96QZ7 1491 aaPredicted RBP34.02■■■■□ 3.04
RAD9A-205ENST00000538013 GRIN2BQ13224 1484 aa34.01■■■■□ 3.04
RAD9A-205ENST00000538013 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
RAD9A-205ENST00000538013 CLASP1Q7Z460 1538 aa33.92■■■■□ 3.02
RAD9A-205ENST00000538013 ABCA10Q8WWZ4 1543 aa33.92■■■■□ 3.02
RAD9A-205ENST00000538013 GAPVD1Q14C86 1478 aa33.91■■■■□ 3.02
RAD9A-205ENST00000538013 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
RAD9A-205ENST00000538013 ARAP1Q96P48 1450 aa33.9■■■■□ 3.02
RAD9A-205ENST00000538013 CYB5RLQ6IPT4 315 aa33.9■■■■□ 3.02
RAD9A-205ENST00000538013 CHMP7Q8WUX9 453 aaPredicted RBP33.9■■■■□ 3.02
RAD9A-205ENST00000538013 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
RAD9A-205ENST00000538013 ABCA5Q8WWZ7 1642 aa33.88■■■■□ 3.01
RAD9A-205ENST00000538013 BIVM-ERCC5R4GMW8 1640 aa33.81■■■■□ 3
RAD9A-205ENST00000538013 TOP2BQ02880 1626 aa33.79■■■■□ 3
RAD9A-205ENST00000538013 WRNQ14191 1432 aaPredicted RBP eCLIP33.78■■■■□ 3
RAD9A-205ENST00000538013 ADAMTS12P58397 1594 aa33.6■■■□□ 2.97
RAD9A-205ENST00000538013 GRIN2AQ12879 1464 aa33.58■■■□□ 2.97
RAD9A-205ENST00000538013 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
RAD9A-205ENST00000538013 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
RAD9A-205ENST00000538013 NUP160Q12769 1436 aa33.48■■■□□ 2.95
RAD9A-205ENST00000538013 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
RAD9A-205ENST00000538013 TRHP20396 242 aaPredicted RBP33.46■■■□□ 2.95
RAD9A-205ENST00000538013 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
RAD9A-205ENST00000538013 SHROOM2Q13796 1616 aa33.35■■■□□ 2.93
RAD9A-205ENST00000538013 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
RAD9A-205ENST00000538013 PRG4Q92954 1404 aaPredicted RBP33.11■■■□□ 2.89
RAD9A-205ENST00000538013 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
RAD9A-205ENST00000538013 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms