RNA–Protein interactions for RNA: ENST00000583848.5

ACADVL-235, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-235ENST00000583848 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.66
ACADVL-235ENST00000583848 ABCC9O60706 1549 aa28.66■■■□□ 2.18
ACADVL-235ENST00000583848 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
ACADVL-235ENST00000583848 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.94
ACADVL-235ENST00000583848 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
ACADVL-235ENST00000583848 NACADO15069 1562 aa26.99■■□□□ 1.91
ACADVL-235ENST00000583848 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
ACADVL-235ENST00000583848 UNC13AQ9UPW8 1703 aa26.68■■□□□ 1.86
ACADVL-235ENST00000583848 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.863e-18■■■■■ 46.2
ACADVL-235ENST00000583848 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
ACADVL-235ENST00000583848 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
ACADVL-235ENST00000583848 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
ACADVL-235ENST00000583848 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
ACADVL-235ENST00000583848 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
ACADVL-235ENST00000583848 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
ACADVL-235ENST00000583848 CC2D2AQ9P2K1 1620 aa25.91■■□□□ 1.74
ACADVL-235ENST00000583848 CECR2Q9BXF3 1484 aa25.83■■□□□ 1.73
ACADVL-235ENST00000583848 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
ACADVL-235ENST00000583848 DNAJC5Q9H3Z4 198 aa24.98■■□□□ 1.59
ACADVL-235ENST00000583848 NCAPD3P42695 1498 aa24.93■■□□□ 1.58
ACADVL-235ENST00000583848 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
ACADVL-235ENST00000583848 CUX2O14529 1486 aa24.77■■□□□ 1.56
ACADVL-235ENST00000583848 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
ACADVL-235ENST00000583848 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
ACADVL-235ENST00000583848 ERCC6Q03468 1493 aa24.71■■□□□ 1.55
ACADVL-235ENST00000583848 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
ACADVL-235ENST00000583848 NESP48681 1621 aa24.6■■□□□ 1.53
ACADVL-235ENST00000583848 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
ACADVL-235ENST00000583848 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
ACADVL-235ENST00000583848 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
ACADVL-235ENST00000583848 MROH2BQ7Z745 1585 aa24.43■■□□□ 1.5
ACADVL-235ENST00000583848 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
ACADVL-235ENST00000583848 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
ACADVL-235ENST00000583848 KIF21AQ7Z4S6 1674 aa24.28■■□□□ 1.48
ACADVL-235ENST00000583848 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
ACADVL-235ENST00000583848 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
ACADVL-235ENST00000583848 WIZO95785 1651 aa24.15■■□□□ 1.46
ACADVL-235ENST00000583848 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
ACADVL-235ENST00000583848 WDR62O43379 1518 aa24■■□□□ 1.43
ACADVL-235ENST00000583848 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
ACADVL-235ENST00000583848 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
ACADVL-235ENST00000583848 CFTRP13569 1480 aa23.86■■□□□ 1.41
ACADVL-235ENST00000583848 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
ACADVL-235ENST00000583848 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
ACADVL-235ENST00000583848 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
ACADVL-235ENST00000583848 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
ACADVL-235ENST00000583848 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
ACADVL-235ENST00000583848 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
ACADVL-235ENST00000583848 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
ACADVL-235ENST00000583848 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
ACADVL-235ENST00000583848 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
ACADVL-235ENST00000583848 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
ACADVL-235ENST00000583848 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
ACADVL-235ENST00000583848 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
ACADVL-235ENST00000583848 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
ACADVL-235ENST00000583848 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
ACADVL-235ENST00000583848 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
ACADVL-235ENST00000583848 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
ACADVL-235ENST00000583848 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
ACADVL-235ENST00000583848 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
ACADVL-235ENST00000583848 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
ACADVL-235ENST00000583848 CHD1O14646 1710 aa23.16■■□□□ 1.3
ACADVL-235ENST00000583848 POLA1P09884 1462 aaPredicted RBP23.16■■□□□ 1.3
ACADVL-235ENST00000583848 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
ACADVL-235ENST00000583848 CYB5RLQ6IPT4 315 aa23.08■■□□□ 1.29
ACADVL-235ENST00000583848 SOGA1O94964 1423 aa23.05■■□□□ 1.28
ACADVL-235ENST00000583848 FBLN2P98095 1184 aa23.04■■□□□ 1.28
ACADVL-235ENST00000583848 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
ACADVL-235ENST00000583848 ARAP1Q96P48 1450 aa23■■□□□ 1.27
ACADVL-235ENST00000583848 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
ACADVL-235ENST00000583848 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
ACADVL-235ENST00000583848 CUX1P39880 1505 aa22.95■■□□□ 1.26
ACADVL-235ENST00000583848 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
ACADVL-235ENST00000583848 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
ACADVL-235ENST00000583848 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
ACADVL-235ENST00000583848 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
ACADVL-235ENST00000583848 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
ACADVL-235ENST00000583848 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
ACADVL-235ENST00000583848 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
ACADVL-235ENST00000583848 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
ACADVL-235ENST00000583848 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
ACADVL-235ENST00000583848 GAPVD1Q14C86 1478 aa22.76■■□□□ 1.23
ACADVL-235ENST00000583848 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
ACADVL-235ENST00000583848 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
ACADVL-235ENST00000583848 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
ACADVL-235ENST00000583848 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
ACADVL-235ENST00000583848 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
ACADVL-235ENST00000583848 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
ACADVL-235ENST00000583848 ERCC6L2Q5T890 1561 aa22.54■■□□□ 1.2
ACADVL-235ENST00000583848 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
ACADVL-235ENST00000583848 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
ACADVL-235ENST00000583848 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
ACADVL-235ENST00000583848 NUP160Q12769 1436 aa22.51■■□□□ 1.19
ACADVL-235ENST00000583848 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
ACADVL-235ENST00000583848 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
ACADVL-235ENST00000583848 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
ACADVL-235ENST00000583848 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
ACADVL-235ENST00000583848 PRG4Q92954 1404 aaPredicted RBP22.29■■□□□ 1.16
ACADVL-235ENST00000583848 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
ACADVL-235ENST00000583848 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms