RNA–Protein interactions for RNA: ENST00000534626.6

RECQL4-208, Transcript of RecQ like helicase 4, humanhuman

TSL 5

Gene RECQL4, Length 1,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-208ENST00000534626 NISCHQ9Y2I1 1504 aa41.74■■■■■ 4.27
RECQL4-208ENST00000534626 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
RECQL4-208ENST00000534626 ABCC9O60706 1549 aa37.37■■■■□ 3.57
RECQL4-208ENST00000534626 RB1CC1Q8TDY2 1594 aa35.71■■■■□ 3.31
RECQL4-208ENST00000534626 NACADO15069 1562 aa35.46■■■■□ 3.27
RECQL4-208ENST00000534626 DCAF8L2P0C7V8 631 aa35.18■■■■□ 3.22
RECQL4-208ENST00000534626 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
RECQL4-208ENST00000534626 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
RECQL4-208ENST00000534626 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
RECQL4-208ENST00000534626 PABPN1Q86U42 306 aaKnown RBP eCLIP34.73■■■■□ 3.153e-9■■■■■ 38.4
RECQL4-208ENST00000534626 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
RECQL4-208ENST00000534626 BICRAQ9NZM4 1560 aa34.54■■■■□ 3.12
RECQL4-208ENST00000534626 DCAF1Q9Y4B6 1507 aa34.54■■■■□ 3.12
RECQL4-208ENST00000534626 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
RECQL4-208ENST00000534626 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
RECQL4-208ENST00000534626 CC2D2AQ9P2K1 1620 aa33.8■■■■□ 3
RECQL4-208ENST00000534626 EIF4G1Q04637 1599 aaKnown RBP33.75■■■□□ 2.99
RECQL4-208ENST00000534626 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
RECQL4-208ENST00000534626 NCAPD3P42695 1498 aa32.66■■■□□ 2.82
RECQL4-208ENST00000534626 SMARCA4P51532 1647 aa32.59■■■□□ 2.81
RECQL4-208ENST00000534626 SMARCA2P51531 1590 aa32.57■■■□□ 2.8
RECQL4-208ENST00000534626 ATAD2BQ9ULI0 1458 aa32.55■■■□□ 2.8
RECQL4-208ENST00000534626 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
RECQL4-208ENST00000534626 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
RECQL4-208ENST00000534626 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
RECQL4-208ENST00000534626 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
RECQL4-208ENST00000534626 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
RECQL4-208ENST00000534626 CUX2O14529 1486 aa32.27■■■□□ 2.76
RECQL4-208ENST00000534626 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
RECQL4-208ENST00000534626 NESP48681 1621 aa32.08■■■□□ 2.73
RECQL4-208ENST00000534626 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
RECQL4-208ENST00000534626 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
RECQL4-208ENST00000534626 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
RECQL4-208ENST00000534626 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
RECQL4-208ENST00000534626 WIZO95785 1651 aa31.79■■■□□ 2.68
RECQL4-208ENST00000534626 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
RECQL4-208ENST00000534626 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
RECQL4-208ENST00000534626 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
RECQL4-208ENST00000534626 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
RECQL4-208ENST00000534626 TOP2AP11388 1531 aaKnown RBP31.43■■■□□ 2.62
RECQL4-208ENST00000534626 WDR62O43379 1518 aa31.41■■■□□ 2.62
RECQL4-208ENST00000534626 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
RECQL4-208ENST00000534626 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
RECQL4-208ENST00000534626 CFTRP13569 1480 aa31.32■■■□□ 2.6
RECQL4-208ENST00000534626 PRDM2Q13029 1718 aa31.19■■■□□ 2.58
RECQL4-208ENST00000534626 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
RECQL4-208ENST00000534626 CCDC88BA6NC98 1476 aa31■■■□□ 2.55
RECQL4-208ENST00000534626 IFT140Q96RY7 1462 aa30.76■■■□□ 2.52
RECQL4-208ENST00000534626 ABCC8Q09428 1581 aa30.76■■■□□ 2.52
RECQL4-208ENST00000534626 OSCARQ8IYS5 282 aa30.75■■■□□ 2.51
RECQL4-208ENST00000534626 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
RECQL4-208ENST00000534626 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
RECQL4-208ENST00000534626 DNMBPQ6XZF7 1577 aa30.68■■■□□ 2.5
RECQL4-208ENST00000534626 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
RECQL4-208ENST00000534626 EIF4G3O43432 1585 aaKnown RBP30.55■■■□□ 2.48
RECQL4-208ENST00000534626 TARBP1Q13395 1621 aaKnown RBP30.47■■■□□ 2.47
RECQL4-208ENST00000534626 POLA1P09884 1462 aaPredicted RBP30.42■■■□□ 2.46
RECQL4-208ENST00000534626 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
RECQL4-208ENST00000534626 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
RECQL4-208ENST00000534626 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
RECQL4-208ENST00000534626 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.453e-7■■■■□ 23.2
RECQL4-208ENST00000534626 CHD1O14646 1710 aa30.35■■■□□ 2.45
RECQL4-208ENST00000534626 SOGA1O94964 1423 aa30.29■■■□□ 2.44
RECQL4-208ENST00000534626 WDR97A6NE52 1622 aa30.28■■■□□ 2.44
RECQL4-208ENST00000534626 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
RECQL4-208ENST00000534626 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.44
RECQL4-208ENST00000534626 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
RECQL4-208ENST00000534626 CUX1P39880 1505 aa30.2■■■□□ 2.42
RECQL4-208ENST00000534626 FBLN2P98095 1184 aa30.19■■■□□ 2.42
RECQL4-208ENST00000534626 TDRD9Q8NDG6 1382 aaKnown RBP30.17■■■□□ 2.42
RECQL4-208ENST00000534626 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
RECQL4-208ENST00000534626 SNAPC4Q5SXM2 1469 aa30.1■■■□□ 2.41
RECQL4-208ENST00000534626 MAGI1Q96QZ7 1491 aaPredicted RBP30.07■■■□□ 2.4
RECQL4-208ENST00000534626 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
RECQL4-208ENST00000534626 PBRM1Q86U86 1689 aa30.01■■■□□ 2.39
RECQL4-208ENST00000534626 SYNJ1O43426 1573 aa30■■■□□ 2.39
RECQL4-208ENST00000534626 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
RECQL4-208ENST00000534626 CHMP7Q8WUX9 453 aaPredicted RBP29.99■■■□□ 2.39
RECQL4-208ENST00000534626 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
RECQL4-208ENST00000534626 ARAP1Q96P48 1450 aa29.94■■■□□ 2.38
RECQL4-208ENST00000534626 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
RECQL4-208ENST00000534626 CLASP1Q7Z460 1538 aa29.93■■■□□ 2.38
RECQL4-208ENST00000534626 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
RECQL4-208ENST00000534626 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.37
RECQL4-208ENST00000534626 WRNQ14191 1432 aaPredicted RBP eCLIP29.82■■■□□ 2.36
RECQL4-208ENST00000534626 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
RECQL4-208ENST00000534626 TOP2BQ02880 1626 aa29.79■■■□□ 2.36
RECQL4-208ENST00000534626 TRHP20396 242 aaPredicted RBP29.7■■■□□ 2.35
RECQL4-208ENST00000534626 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
RECQL4-208ENST00000534626 GRIN2AQ12879 1464 aa29.65■■■□□ 2.34
RECQL4-208ENST00000534626 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
RECQL4-208ENST00000534626 FHAD1B1AJZ9 1412 aa29.57■■■□□ 2.32
RECQL4-208ENST00000534626 NUP160Q12769 1436 aa29.53■■■□□ 2.32
RECQL4-208ENST00000534626 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
RECQL4-208ENST00000534626 SHROOM2Q13796 1616 aa29.43■■■□□ 2.3
RECQL4-208ENST00000534626 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
RECQL4-208ENST00000534626 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
RECQL4-208ENST00000534626 PRG4Q92954 1404 aaPredicted RBP29.24■■■□□ 2.27
RECQL4-208ENST00000534626 CUL7Q14999 1698 aa29.22■■■□□ 2.27
RECQL4-208ENST00000534626 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms