RNA–Protein interactions for RNA: ENST00000470659.1

ACAP3-207, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 3

Gene ACAP3, Length 421 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-207ENST00000470659 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
ACAP3-207ENST00000470659 CCDC180Q9P1Z9 1646 aa36.67■■■■□ 3.46
ACAP3-207ENST00000470659 ABCC9O60706 1549 aa36.58■■■■□ 3.45
ACAP3-207ENST00000470659 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
ACAP3-207ENST00000470659 NACADO15069 1562 aa34.7■■■■□ 3.14
ACAP3-207ENST00000470659 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
ACAP3-207ENST00000470659 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
ACAP3-207ENST00000470659 DNAJC5BQ9UF47 199 aa34.24■■■■□ 3.07
ACAP3-207ENST00000470659 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.054e-15■■■■■ 46.4
ACAP3-207ENST00000470659 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.04
ACAP3-207ENST00000470659 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
ACAP3-207ENST00000470659 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
ACAP3-207ENST00000470659 BICRAQ9NZM4 1560 aa33.81■■■■□ 3
ACAP3-207ENST00000470659 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
ACAP3-207ENST00000470659 SCRIBQ14160 1630 aa33.41■■■□□ 2.94
ACAP3-207ENST00000470659 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
ACAP3-207ENST00000470659 EIF4G1Q04637 1599 aaKnown RBP33■■■□□ 2.87
ACAP3-207ENST00000470659 CECR2Q9BXF3 1484 aa32.96■■■□□ 2.87
ACAP3-207ENST00000470659 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
ACAP3-207ENST00000470659 ATAD2BQ9ULI0 1458 aa31.95■■■□□ 2.7
ACAP3-207ENST00000470659 SMARCA4P51532 1647 aa31.9■■■□□ 2.7
ACAP3-207ENST00000470659 SMARCA2P51531 1590 aa31.87■■■□□ 2.69
ACAP3-207ENST00000470659 BAZ1AQ9NRL2 1556 aaPredicted RBP31.81■■■□□ 2.68
ACAP3-207ENST00000470659 HMGXB3Q12766 1538 aa31.77■■■□□ 2.68
ACAP3-207ENST00000470659 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
ACAP3-207ENST00000470659 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
ACAP3-207ENST00000470659 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
ACAP3-207ENST00000470659 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
ACAP3-207ENST00000470659 CUX2O14529 1486 aa31.5■■■□□ 2.63
ACAP3-207ENST00000470659 NESP48681 1621 aa31.44■■■□□ 2.62
ACAP3-207ENST00000470659 DNAJC5Q9H3Z4 198 aa31.4■■■□□ 2.62
ACAP3-207ENST00000470659 LAMC3Q9Y6N6 1575 aa31.27■■■□□ 2.6
ACAP3-207ENST00000470659 WIZO95785 1651 aa31.16■■■□□ 2.58
ACAP3-207ENST00000470659 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
ACAP3-207ENST00000470659 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
ACAP3-207ENST00000470659 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
ACAP3-207ENST00000470659 KIF21AQ7Z4S6 1674 aa31■■■□□ 2.55
ACAP3-207ENST00000470659 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
ACAP3-207ENST00000470659 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
ACAP3-207ENST00000470659 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
ACAP3-207ENST00000470659 CFTRP13569 1480 aa30.74■■■□□ 2.51
ACAP3-207ENST00000470659 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
ACAP3-207ENST00000470659 WDR62O43379 1518 aa30.71■■■□□ 2.51
ACAP3-207ENST00000470659 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
ACAP3-207ENST00000470659 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
ACAP3-207ENST00000470659 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
ACAP3-207ENST00000470659 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
ACAP3-207ENST00000470659 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
ACAP3-207ENST00000470659 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
ACAP3-207ENST00000470659 TOPBP1Q92547 1522 aa30.13■■■□□ 2.41
ACAP3-207ENST00000470659 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
ACAP3-207ENST00000470659 TRIM41Q8WV44 630 aa30.06■■■□□ 2.4
ACAP3-207ENST00000470659 SUPT5HO00267 1087 aaKnown RBP30.04■■■□□ 2.4
ACAP3-207ENST00000470659 ZNF608Q9ULD9 1512 aaPredicted RBP30.02■■■□□ 2.4
ACAP3-207ENST00000470659 DNMBPQ6XZF7 1577 aa30.02■■■□□ 2.4
ACAP3-207ENST00000470659 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
ACAP3-207ENST00000470659 EIF4G3O43432 1585 aaKnown RBP29.82■■■□□ 2.36
ACAP3-207ENST00000470659 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
ACAP3-207ENST00000470659 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.362e-7■■□□□ 12.5
ACAP3-207ENST00000470659 SOGA1O94964 1423 aa29.75■■■□□ 2.35
ACAP3-207ENST00000470659 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
ACAP3-207ENST00000470659 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
ACAP3-207ENST00000470659 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
ACAP3-207ENST00000470659 FBLN2P98095 1184 aa29.65■■■□□ 2.34
ACAP3-207ENST00000470659 CUX1P39880 1505 aa29.64■■■□□ 2.34
ACAP3-207ENST00000470659 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
ACAP3-207ENST00000470659 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
ACAP3-207ENST00000470659 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
ACAP3-207ENST00000470659 CHD1O14646 1710 aa29.57■■■□□ 2.32
ACAP3-207ENST00000470659 ARHGEF11O15085 1522 aa29.57■■■□□ 2.32
ACAP3-207ENST00000470659 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
ACAP3-207ENST00000470659 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
ACAP3-207ENST00000470659 SNAPC4Q5SXM2 1469 aa29.47■■■□□ 2.31
ACAP3-207ENST00000470659 GRIN2BQ13224 1484 aa29.45■■■□□ 2.31
ACAP3-207ENST00000470659 CYB5RLQ6IPT4 315 aa29.44■■■□□ 2.3
ACAP3-207ENST00000470659 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
ACAP3-207ENST00000470659 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
ACAP3-207ENST00000470659 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
ACAP3-207ENST00000470659 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
ACAP3-207ENST00000470659 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
ACAP3-207ENST00000470659 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
ACAP3-207ENST00000470659 ARAP1Q96P48 1450 aa29.28■■■□□ 2.28
ACAP3-207ENST00000470659 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
ACAP3-207ENST00000470659 PBRM1Q86U86 1689 aa29.26■■■□□ 2.27
ACAP3-207ENST00000470659 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
ACAP3-207ENST00000470659 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
ACAP3-207ENST00000470659 BIVM-ERCC5R4GMW8 1640 aa29.18■■■□□ 2.26
ACAP3-207ENST00000470659 TRHP20396 242 aaPredicted RBP29.08■■■□□ 2.25
ACAP3-207ENST00000470659 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
ACAP3-207ENST00000470659 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
ACAP3-207ENST00000470659 ADAMTS12P58397 1594 aa29■■■□□ 2.23
ACAP3-207ENST00000470659 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
ACAP3-207ENST00000470659 NUP160Q12769 1436 aa28.95■■■□□ 2.23
ACAP3-207ENST00000470659 CEP170Q5SW79 1584 aa28.89■■■□□ 2.22
ACAP3-207ENST00000470659 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
ACAP3-207ENST00000470659 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
ACAP3-207ENST00000470659 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
ACAP3-207ENST00000470659 KIF27Q86VH2 1401 aa28.7■■■□□ 2.19
ACAP3-207ENST00000470659 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
ACAP3-207ENST00000470659 IGF1RP08069 1367 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms