Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC9.69□□□□□ -0.864e-10■■■□□ 18.5
XRN2Q9H0D6 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC9.18□□□□□ -0.944e-10■■■□□ 18.5
XRN2Q9H0D6 MATR3-221ENST00000513121 573 ntTSL 222.84■■□□□ 1.252e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-220ENST00000512876 575 ntTSL 320.26■□□□□ 0.832e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-222ENST00000513678 444 ntTSL 220.26■□□□□ 0.832e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-208ENST00000504045 1530 ntTSL 520.01■□□□□ 0.792e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.9■□□□□ 0.782e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-239ENST00000514694 587 ntTSL 417.8■□□□□ 0.442e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-235ENST00000506147 580 ntTSL 417.66■□□□□ 0.422e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-238ENST00000512107 579 ntTSL 416.54■□□□□ 0.242e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-236ENST00000509644 750 ntTSL 315.97■□□□□ 0.152e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-234ENST00000505016 664 ntTSL 214.85□□□□□ -0.032e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-231ENST00000502394 589 ntTSL 413.4□□□□□ -0.262e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC13.15□□□□□ -0.32e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.462e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.552e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.9□□□□□ -0.982e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.062e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.072e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.26□□□□□ -1.092e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.31□□□□□ -1.242e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-212ENST00000507860 571 ntTSL 46.36□□□□□ -1.392e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.8□□□□□ -1.482e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-218ENST00000511978 573 ntTSL 35.8□□□□□ -1.482e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-216ENST00000511249 447 ntTSL 45.04□□□□□ -1.62e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-209ENST00000504311 423 ntTSL 34.87□□□□□ -1.632e-11■■■□□ 18.4
XRN2Q9H0D6 MATR3-214ENST00000509918 377 ntTSL 44.61□□□□□ -1.672e-11■■■□□ 18.4
XRN2Q9H0D6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.426e-7■■■□□ 18.4
XRN2Q9H0D6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.264e-8■■■□□ 18.4
XRN2Q9H0D6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.286e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.29■□□□□ 0.26e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC13.02□□□□□ -0.326e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-217ENST00000550520 753 ntTSL 312.75□□□□□ -0.376e-12■■■□□ 18.4
XRN2Q9H0D6 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC11.67□□□□□ -0.546e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.566e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.596e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.646e-12■■■□□ 18.4
XRN2Q9H0D6 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC10.05□□□□□ -0.86e-12■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.29■□□□□ 0.364e-6■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.324e-6■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.71■□□□□ 0.14e-6■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.86□□□□□ -0.034e-6■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC10.83□□□□□ -0.684e-6■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-209ENST00000529324 579 ntTSL 36.41□□□□□ -1.384e-6■■■□□ 18.4
XRN2Q9H0D6 PPP3CA-208ENST00000525819 569 ntTSL 44.07□□□□□ -1.764e-6■■■□□ 18.4
XRN2Q9H0D6 FBRSL1-202ENST00000536075 208 ntTSL 514.29□□□□□ -0.123e-10■■■□□ 18.4
XRN2Q9H0D6 SKI-202ENST00000478223 294 ntTSL 313.85□□□□□ -0.191e-6■■■□□ 18.4
XRN2Q9H0D6 CTSB-224ENST00000532392 570 ntTSL 417.01■□□□□ 0.311e-10■■■□□ 18.4
XRN2Q9H0D6 WAC-212ENST00000448193 506 ntTSL 232.17■■■□□ 2.741e-9■■■□□ 18.4
XRN2Q9H0D6 WAC-211ENST00000442148 759 ntTSL 523.15■■□□□ 1.31e-9■■■□□ 18.4
XRN2Q9H0D6 AC132938.6-201ENST00000623828 1655 ntBASIC19.87■□□□□ 0.772e-15■■■□□ 18.4
XRN2Q9H0D6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.34■□□□□ 0.377e-6■■■□□ 18.4
XRN2Q9H0D6 ULK1-202ENST00000537421 959 ntTSL 314.87□□□□□ -0.032e-6■■■□□ 18.4
XRN2Q9H0D6 GUSBP1-201ENST00000449061 758 ntBASIC13.86□□□□□ -0.197e-6■■■□□ 18.4
XRN2Q9H0D6 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.29□□□□□ -1.247e-6■■■□□ 18.4
XRN2Q9H0D6 ZFPM1-202ENST00000562417 497 ntTSL 320.22■□□□□ 0.831e-6■■■□□ 18.4
XRN2Q9H0D6 ESRRA-206ENST00000539594 747 ntTSL 332.89■■■□□ 2.863e-8■■■□□ 18.3
XRN2Q9H0D6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.813e-8■■■□□ 18.3
XRN2Q9H0D6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.243e-8■■■□□ 18.3
XRN2Q9H0D6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.022e-6■■■□□ 18.3
XRN2Q9H0D6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.385e-6■■■□□ 18.3
XRN2Q9H0D6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.25e-6■■■□□ 18.3
XRN2Q9H0D6 EIF4A1-222ENST00000582050 576 ntTSL 520.14■□□□□ 0.811e-13■■■□□ 18.3
XRN2Q9H0D6 EIF4A1-228ENST00000583389 951 ntTSL 316.61■□□□□ 0.251e-13■■■□□ 18.3
XRN2Q9H0D6 EIF4A1-207ENST00000578324 1577 ntTSL 516.6■□□□□ 0.251e-13■■■□□ 18.3
XRN2Q9H0D6 MAD1L1-219ENST00000481633 548 ntTSL 216.58■□□□□ 0.247e-12■■■□□ 18.3
XRN2Q9H0D6 AGAP3-223ENST00000492234 560 ntTSL 415.11■□□□□ 0.015e-6■■■□□ 18.3
XRN2Q9H0D6 EIF4A1-221ENST00000581841 621 ntTSL 210.93□□□□□ -0.661e-13■■■□□ 18.3
XRN2Q9H0D6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.642e-7■■■□□ 18.3
XRN2Q9H0D6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.712e-7■■■□□ 18.3
XRN2Q9H0D6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.572e-6■■■□□ 18.3
XRN2Q9H0D6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.992e-6■■■□□ 18.3
XRN2Q9H0D6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.862e-6■■■□□ 18.3
XRN2Q9H0D6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.49■□□□□ 0.712e-6■■■□□ 18.3
XRN2Q9H0D6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.98■□□□□ 0.156e-7■■■□□ 18.3
XRN2Q9H0D6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.478e-7■■■□□ 18.3
XRN2Q9H0D6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.947e-7■■■□□ 18.3
XRN2Q9H0D6 ELL2-207ENST00000515020 340 ntTSL 229.23■■■□□ 2.272e-9■■■□□ 18.3
XRN2Q9H0D6 ELL2-206ENST00000513343 582 ntTSL 325.74■■□□□ 1.712e-9■■■□□ 18.3
XRN2Q9H0D6 ELL2-203ENST00000506628 520 ntTSL 523.84■■□□□ 1.412e-9■■■□□ 18.3
XRN2Q9H0D6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-9■■■□□ 18.3
XRN2Q9H0D6 ELL2-208ENST00000635633 467 ntTSL 38.63□□□□□ -1.032e-9■■■□□ 18.3
XRN2Q9H0D6 SUZ12P1-201ENST00000497969 886 ntTSL 1 (best)29.81■■■□□ 2.368e-12■■■□□ 18.3
XRN2Q9H0D6 PTBP1-213ENST00000587191 357 ntTSL 513.59□□□□□ -0.235e-7■■■□□ 18.3
XRN2Q9H0D6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.06■■□□□ 1.289e-7■■■□□ 18.3
XRN2Q9H0D6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.999e-7■■■□□ 18.3
XRN2Q9H0D6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.289e-7■■■□□ 18.3
XRN2Q9H0D6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.19e-7■■■□□ 18.3
XRN2Q9H0D6 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.233e-6■■■□□ 18.3
XRN2Q9H0D6 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.233e-6■■■□□ 18.3
XRN2Q9H0D6 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.353e-6■■■□□ 18.3
XRN2Q9H0D6 EPHA2-204ENST00000480202 795 ntTSL 521.14■□□□□ 0.974e-7■■■□□ 18.3
XRN2Q9H0D6 HNRNPF-206ENST00000498176 715 ntTSL 1 (best)26.09■■□□□ 1.771e-6■■■□□ 18.3
XRN2Q9H0D6 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)17.96■□□□□ 0.471e-6■■■□□ 18.3
XRN2Q9H0D6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.131e-6■■■□□ 18.3
XRN2Q9H0D6 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.391e-6■■■□□ 18.3
XRN2Q9H0D6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24■■□□□ 1.432e-7■■■□□ 18.3
XRN2Q9H0D6 POLR3E-215ENST00000565551 645 ntTSL 517.37■□□□□ 0.376e-6■■■□□ 18.3
XRN2Q9H0D6 DKC1-208ENST00000475423 587 ntTSL 220.07■□□□□ 0.81e-11■■■□□ 18.3
XRN2Q9H0D6 STXBP2-214ENST00000599400 811 ntTSL 517.72■□□□□ 0.431e-11■■■□□ 18.3
Retrieved 100 of 21,068 protein–RNA pairs in 112.2 ms