RNA–Protein interactions for RNA: ENST00000000442.10

ESRRA-201, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-201ENST00000000442 NISCHQ9Y2I1 1504 aa55.22■■■■■ 6.43
ESRRA-201ENST00000000442 CCDC180Q9P1Z9 1646 aa47.6■■■■■ 5.21
ESRRA-201ENST00000000442 SHROOM4Q9ULL8 1493 aa46.72■■■■■ 5.07
ESRRA-201ENST00000000442 ZCCHC6Q5VYS8 1495 aaKnown RBP46.7■■■■■ 5.07
ESRRA-201ENST00000000442 SUPT5HO00267 1087 aaKnown RBP45.85■■■■■ 4.93
ESRRA-201ENST00000000442 DCAF1Q9Y4B6 1507 aa45.57■■■■■ 4.89
ESRRA-201ENST00000000442 DCAF8L2P0C7V8 631 aa45.5■■■■■ 4.87
ESRRA-201ENST00000000442 CHIC1Q5VXU3 224 aa44.74■■■■■ 4.75
ESRRA-201ENST00000000442 MYO15BQ96JP2 1530 aa44.62■■■■■ 4.73
ESRRA-201ENST00000000442 ABCC9O60706 1549 aa44.24■■■■■ 4.67
ESRRA-201ENST00000000442 NACADO15069 1562 aa44.11■■■■■ 4.65
ESRRA-201ENST00000000442 SCRIBQ14160 1630 aa44.07■■■■■ 4.65
ESRRA-201ENST00000000442 RSF1Q96T23 1441 aaPredicted RBP43.59■■■■■ 4.57
ESRRA-201ENST00000000442 RB1CC1Q8TDY2 1594 aa43.52■■■■■ 4.56
ESRRA-201ENST00000000442 HRCP23327 699 aa43.45■■■■■ 4.55
ESRRA-201ENST00000000442 PCGF6Q9BYE7 350 aa43.28■■■■■ 4.52
ESRRA-201ENST00000000442 LOC105371045A0A1W2PR82 267 aa43.28■■■■■ 4.52
ESRRA-201ENST00000000442 CECR2Q9BXF3 1484 aa42.89■■■■■ 4.46
ESRRA-201ENST00000000442 TRIM41Q8WV44 630 aa42.83■■■■■ 4.45
ESRRA-201ENST00000000442 MROH2BQ7Z745 1585 aa42.8■■■■■ 4.44
ESRRA-201ENST00000000442 UNC13AQ9UPW8 1703 aa42.71■■■■■ 4.43
ESRRA-201ENST00000000442 TRIM26Q12899 539 aaPredicted RBP42.62■■■■■ 4.41
ESRRA-201ENST00000000442 WIZO95785 1651 aa42.59■■■■■ 4.41
ESRRA-201ENST00000000442 BAZ1AQ9NRL2 1556 aaPredicted RBP42.56■■■■■ 4.4
ESRRA-201ENST00000000442 PPARGC1BQ86YN6 1023 aaKnown RBP42.32■■■■■ 4.37
ESRRA-201ENST00000000442 FAM9AQ8IZU1 332 aaPredicted RBP42.31■■■■■ 4.36
ESRRA-201ENST00000000442 SMARCA4P51532 1647 aa42.24■■■■■ 4.35
ESRRA-201ENST00000000442 BICRAQ9NZM4 1560 aa42.19■■■■■ 4.34
ESRRA-201ENST00000000442 EIF4G1Q04637 1599 aaKnown RBP42.15■■■■■ 4.34
ESRRA-201ENST00000000442 TOP2AP11388 1531 aaKnown RBP42.02■■■■■ 4.32
ESRRA-201ENST00000000442 PABPN1Q86U42 306 aaKnown RBP eCLIP41.98■■■■■ 4.31
ESRRA-201ENST00000000442 EHMT2Q96KQ7 1210 aa41.8■■■■■ 4.28
ESRRA-201ENST00000000442 ZEB1P37275 1124 aaPredicted RBP41.8■■■■■ 4.28
ESRRA-201ENST00000000442 SMARCA2P51531 1590 aa41.75■■■■■ 4.27
ESRRA-201ENST00000000442 CCDC88BA6NC98 1476 aa41.75■■■■■ 4.27
ESRRA-201ENST00000000442 PEG3Q9GZU2 1588 aa41.62■■■■■ 4.25
ESRRA-201ENST00000000442 ABCC8Q09428 1581 aa41.59■■■■■ 4.25
ESRRA-201ENST00000000442 ATAD2BQ9ULI0 1458 aa41.29■■■■■ 4.2
ESRRA-201ENST00000000442 EEA1Q15075 1411 aa41.22■■■■■ 4.19
ESRRA-201ENST00000000442 SOGA1O94964 1423 aa41.19■■■■■ 4.18
ESRRA-201ENST00000000442 WRNQ14191 1432 aaPredicted RBP eCLIP41.17■■■■■ 4.188e-13■■■■□ 21.5
ESRRA-201ENST00000000442 BAZ1BQ9UIG0 1483 aaKnown RBP41.15■■■■■ 4.18
ESRRA-201ENST00000000442 CEP162Q5TB80 1403 aa41.09■■■■■ 4.17
ESRRA-201ENST00000000442 TNIKQ9UKE5 1360 aa41.08■■■■■ 4.17
ESRRA-201ENST00000000442 CSRNP3Q8WYN3 585 aa41■■■■■ 4.15
ESRRA-201ENST00000000442 RUSC2Q8N2Y8 1516 aa40.96■■■■■ 4.15
ESRRA-201ENST00000000442 GOLGA3Q08378 1498 aa40.85■■■■■ 4.13
ESRRA-201ENST00000000442 SYNJ1O43426 1573 aa40.77■■■■■ 4.12
ESRRA-201ENST00000000442 UBTFP17480 764 aaKnown RBP40.75■■■■■ 4.11
ESRRA-201ENST00000000442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.75■■■■■ 4.11
ESRRA-201ENST00000000442 HMGXB3Q12766 1538 aa40.74■■■■■ 4.11
ESRRA-201ENST00000000442 NCAPD3P42695 1498 aa40.72■■■■■ 4.11
ESRRA-201ENST00000000442 CCER1Q8TC90 406 aaPredicted RBP40.71■■■■■ 4.11
ESRRA-201ENST00000000442 KIF21BO75037 1637 aa40.64■■■■■ 4.1
ESRRA-201ENST00000000442 CEP164Q9UPV0 1460 aa40.63■■■■■ 4.1
ESRRA-201ENST00000000442 TTBK1Q5TCY1 1321 aaPredicted RBP40.52■■■■■ 4.08
ESRRA-201ENST00000000442 TOP2BQ02880 1626 aa40.35■■■■■ 4.05
ESRRA-201ENST00000000442 CLIP1P30622 1438 aa40.33■■■■■ 4.05
ESRRA-201ENST00000000442 BIVM-ERCC5R4GMW8 1640 aa40.24■■■■■ 4.03
ESRRA-201ENST00000000442 RAPGEF2Q9Y4G8 1499 aa40.23■■■■■ 4.03
ESRRA-201ENST00000000442 VPS8Q8N3P4 1428 aa40.2■■■■■ 4.03
ESRRA-201ENST00000000442 CFTRP13569 1480 aa40.13■■■■■ 4.02
ESRRA-201ENST00000000442 CC2D2AQ9P2K1 1620 aa40.01■■■■■ 4
ESRRA-201ENST00000000442 ERICH3Q5RHP9 1530 aa40■■■■□ 3.99
ESRRA-201ENST00000000442 PRDM2Q13029 1718 aa39.96■■■■□ 3.99
ESRRA-201ENST00000000442 DIEXFQ68CQ4 756 aaKnown RBP39.95■■■■□ 3.99
ESRRA-201ENST00000000442 SCAF1Q9H7N4 1312 aaKnown RBP39.94■■■■□ 3.98
ESRRA-201ENST00000000442 APLP2Q06481 763 aa39.93■■■■□ 3.98
ESRRA-201ENST00000000442 PRXQ9BXM0 1461 aa39.92■■■■□ 3.98
ESRRA-201ENST00000000442 CUX1P39880 1505 aa39.89■■■■□ 3.98
ESRRA-201ENST00000000442 HNRNPUL2Q1KMD3 747 aaKnown RBP39.81■■■■□ 3.96
ESRRA-201ENST00000000442 CADPSQ9ULU8 1353 aa39.79■■■■□ 3.96
ESRRA-201ENST00000000442 RANGAP1P46060 587 aaPredicted RBP39.74■■■■□ 3.95
ESRRA-201ENST00000000442 KIF27Q86VH2 1401 aa39.72■■■■□ 3.95
ESRRA-201ENST00000000442 ZNF316A6NFI3 1004 aaPredicted RBP39.71■■■■□ 3.95
ESRRA-201ENST00000000442 ARAP1Q96P48 1450 aa39.69■■■■□ 3.94
ESRRA-201ENST00000000442 ACIN1Q9UKV3 1341 aaKnown RBP39.66■■■■□ 3.94
ESRRA-201ENST00000000442 NEUROD1Q13562 356 aa39.53■■■■□ 3.92
ESRRA-201ENST00000000442 CENPBP07199 599 aaPredicted RBP39.49■■■■□ 3.91
ESRRA-201ENST00000000442 FANCD2Q9BXW9 1451 aa39.38■■■■□ 3.9
ESRRA-201ENST00000000442 KANK4Q5T7N3 995 aaPredicted RBP39.34■■■■□ 3.89
ESRRA-201ENST00000000442 PELP1Q8IZL8 1130 aaKnown RBP39.34■■■■□ 3.89
ESRRA-201ENST00000000442 ARHGAP35Q9NRY4 1499 aa39.34■■■■□ 3.89
ESRRA-201ENST00000000442 CLSPNQ9HAW4 1339 aa39.32■■■■□ 3.89
ESRRA-201ENST00000000442 FGD5Q6ZNL6 1462 aa39.31■■■■□ 3.88
ESRRA-201ENST00000000442 RRBP1Q9P2E9 1410 aaKnown RBP39.3■■■■□ 3.88
ESRRA-201ENST00000000442 CUX2O14529 1486 aa39.28■■■■□ 3.88
ESRRA-201ENST00000000442 IGF1RP08069 1367 aa39.23■■■■□ 3.87
ESRRA-201ENST00000000442 DHX57Q6P158 1386 aaKnown RBP39.21■■■■□ 3.87
ESRRA-201ENST00000000442 DNMBPQ6XZF7 1577 aa39.18■■■■□ 3.86
ESRRA-201ENST00000000442 LAMC3Q9Y6N6 1575 aa39.18■■■■□ 3.86
ESRRA-201ENST00000000442 NESP48681 1621 aa39.17■■■■□ 3.86
ESRRA-201ENST00000000442 GTF3C3Q9Y5Q9 886 aa39.13■■■■□ 3.85
ESRRA-201ENST00000000442 CARMIL1Q5VZK9 1371 aa39.07■■■■□ 3.85
ESRRA-201ENST00000000442 CCNB3Q8WWL7 1395 aa39.07■■■■□ 3.85
ESRRA-201ENST00000000442 TOPBP1Q92547 1522 aa39.06■■■■□ 3.84
ESRRA-201ENST00000000442 MAP3K1Q13233 1512 aa39.04■■■■□ 3.84
ESRRA-201ENST00000000442 MIER1Q8N108 512 aa39.04■■■■□ 3.84
ESRRA-201ENST00000000442 TIAM1Q13009 1591 aa38.98■■■■□ 3.83
ESRRA-201ENST00000000442 POLA1P09884 1462 aaPredicted RBP38.96■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms