RNA–Protein interactions for RNA: ENST00000337495.9

SCMH1-202, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 3,108 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-202ENST00000337495 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
SCMH1-202ENST00000337495 CCDC180Q9P1Z9 1646 aa18.02■□□□□ 0.48
SCMH1-202ENST00000337495 ABCC9O60706 1549 aa17.68■□□□□ 0.42
SCMH1-202ENST00000337495 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
SCMH1-202ENST00000337495 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
SCMH1-202ENST00000337495 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
SCMH1-202ENST00000337495 NACADO15069 1562 aa16.91■□□□□ 0.3
SCMH1-202ENST00000337495 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
SCMH1-202ENST00000337495 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
SCMH1-202ENST00000337495 UNC13AQ9UPW8 1703 aa16.69■□□□□ 0.26
SCMH1-202ENST00000337495 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
SCMH1-202ENST00000337495 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.23
SCMH1-202ENST00000337495 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
SCMH1-202ENST00000337495 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
SCMH1-202ENST00000337495 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
SCMH1-202ENST00000337495 HRCP23327 699 aa16.25■□□□□ 0.19
SCMH1-202ENST00000337495 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
SCMH1-202ENST00000337495 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
SCMH1-202ENST00000337495 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
SCMH1-202ENST00000337495 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
SCMH1-202ENST00000337495 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
SCMH1-202ENST00000337495 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
SCMH1-202ENST00000337495 SUPT5HO00267 1087 aaKnown RBP15.78■□□□□ 0.12
SCMH1-202ENST00000337495 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
SCMH1-202ENST00000337495 SMARCA4P51532 1647 aa15.77■□□□□ 0.11
SCMH1-202ENST00000337495 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
SCMH1-202ENST00000337495 MYT1Q01538 1121 aa15.69■□□□□ 0.1
SCMH1-202ENST00000337495 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
SCMH1-202ENST00000337495 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
SCMH1-202ENST00000337495 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
SCMH1-202ENST00000337495 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
SCMH1-202ENST00000337495 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
SCMH1-202ENST00000337495 HMGXB3Q12766 1538 aa15.55■□□□□ 0.08
SCMH1-202ENST00000337495 WIZO95785 1651 aa15.54■□□□□ 0.08
SCMH1-202ENST00000337495 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
SCMH1-202ENST00000337495 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
SCMH1-202ENST00000337495 NESP48681 1621 aa15.34■□□□□ 0.05
SCMH1-202ENST00000337495 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
SCMH1-202ENST00000337495 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
SCMH1-202ENST00000337495 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.02
SCMH1-202ENST00000337495 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
SCMH1-202ENST00000337495 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
SCMH1-202ENST00000337495 GTF3C3Q9Y5Q9 886 aa15.17■□□□□ 0.02
SCMH1-202ENST00000337495 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
SCMH1-202ENST00000337495 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
SCMH1-202ENST00000337495 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
SCMH1-202ENST00000337495 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
SCMH1-202ENST00000337495 CFTRP13569 1480 aa15.09■□□□□ 0.01
SCMH1-202ENST00000337495 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0.01
SCMH1-202ENST00000337495 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
SCMH1-202ENST00000337495 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
SCMH1-202ENST00000337495 FANCD2Q9BXW9 1451 aa15.02□□□□□ -0.01
SCMH1-202ENST00000337495 TRIM26Q12899 539 aaPredicted RBP15.01□□□□□ -0.01
SCMH1-202ENST00000337495 LOC105371045A0A1W2PR82 267 aa15.01□□□□□ -0.01
SCMH1-202ENST00000337495 CUX2O14529 1486 aa14.99□□□□□ -0.01
SCMH1-202ENST00000337495 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
SCMH1-202ENST00000337495 BCL11AQ9H165 835 aa14.96□□□□□ -0.02
SCMH1-202ENST00000337495 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
SCMH1-202ENST00000337495 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
SCMH1-202ENST00000337495 WDR62O43379 1518 aa14.93□□□□□ -0.02
SCMH1-202ENST00000337495 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
SCMH1-202ENST00000337495 CENPBP07199 599 aaPredicted RBP14.87□□□□□ -0.03
SCMH1-202ENST00000337495 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
SCMH1-202ENST00000337495 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
SCMH1-202ENST00000337495 TTBK1Q5TCY1 1321 aaPredicted RBP14.78□□□□□ -0.04
SCMH1-202ENST00000337495 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
SCMH1-202ENST00000337495 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
SCMH1-202ENST00000337495 PRKCSHP14314 528 aaPredicted RBP14.73□□□□□ -0.05
SCMH1-202ENST00000337495 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
SCMH1-202ENST00000337495 CUX1P39880 1505 aa14.71□□□□□ -0.05
SCMH1-202ENST00000337495 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
SCMH1-202ENST00000337495 DIEXFQ68CQ4 756 aaKnown RBP14.68□□□□□ -0.06
SCMH1-202ENST00000337495 POLA1P09884 1462 aaPredicted RBP14.67□□□□□ -0.06
SCMH1-202ENST00000337495 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
SCMH1-202ENST00000337495 TARBP1Q13395 1621 aaKnown RBP14.65□□□□□ -0.06
SCMH1-202ENST00000337495 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
SCMH1-202ENST00000337495 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
SCMH1-202ENST00000337495 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
SCMH1-202ENST00000337495 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
SCMH1-202ENST00000337495 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
SCMH1-202ENST00000337495 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
SCMH1-202ENST00000337495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
SCMH1-202ENST00000337495 SOGA1O94964 1423 aa14.57□□□□□ -0.08
SCMH1-202ENST00000337495 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
SCMH1-202ENST00000337495 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
SCMH1-202ENST00000337495 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
SCMH1-202ENST00000337495 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.083e-6■■■■□ 21.2
SCMH1-202ENST00000337495 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
SCMH1-202ENST00000337495 ANP32EQ9BTT0 268 aa14.55□□□□□ -0.08
SCMH1-202ENST00000337495 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
SCMH1-202ENST00000337495 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.08
SCMH1-202ENST00000337495 DNAJC5Q9H3Z4 198 aa14.52□□□□□ -0.09
SCMH1-202ENST00000337495 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
SCMH1-202ENST00000337495 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
SCMH1-202ENST00000337495 ABCA5Q8WWZ7 1642 aa14.45□□□□□ -0.1
SCMH1-202ENST00000337495 PBRM1Q86U86 1689 aa14.44□□□□□ -0.1
SCMH1-202ENST00000337495 CHD1O14646 1710 aa14.43□□□□□ -0.1
SCMH1-202ENST00000337495 SNAPC4Q5SXM2 1469 aa14.42□□□□□ -0.1
SCMH1-202ENST00000337495 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
SCMH1-202ENST00000337495 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms