RNA–Protein interactions for RNA: ENST00000544000.5

HNRNPF-207, Transcript of heterogeneous nuclear ribonucleoprotein F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNRNPF, Length 2,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPF-207ENST00000544000 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
HNRNPF-207ENST00000544000 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
HNRNPF-207ENST00000544000 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
HNRNPF-207ENST00000544000 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
HNRNPF-207ENST00000544000 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
HNRNPF-207ENST00000544000 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
HNRNPF-207ENST00000544000 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
HNRNPF-207ENST00000544000 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
HNRNPF-207ENST00000544000 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
HNRNPF-207ENST00000544000 ABCC9O60706 1549 aa21■□□□□ 0.95
HNRNPF-207ENST00000544000 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
HNRNPF-207ENST00000544000 HRCP23327 699 aa20.78■□□□□ 0.92
HNRNPF-207ENST00000544000 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
HNRNPF-207ENST00000544000 NACADO15069 1562 aa20.7■□□□□ 0.9
HNRNPF-207ENST00000544000 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
HNRNPF-207ENST00000544000 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
HNRNPF-207ENST00000544000 LOC105371045A0A1W2PR82 267 aa20.56■□□□□ 0.88
HNRNPF-207ENST00000544000 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
HNRNPF-207ENST00000544000 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
HNRNPF-207ENST00000544000 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
HNRNPF-207ENST00000544000 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
HNRNPF-207ENST00000544000 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
HNRNPF-207ENST00000544000 WIZO95785 1651 aa20.21■□□□□ 0.83
HNRNPF-207ENST00000544000 PPARGC1BQ86YN6 1023 aaKnown RBP20.12■□□□□ 0.81
HNRNPF-207ENST00000544000 EIF4G1Q04637 1599 aaKnown RBP20.07■□□□□ 0.8
HNRNPF-207ENST00000544000 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
HNRNPF-207ENST00000544000 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
HNRNPF-207ENST00000544000 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
HNRNPF-207ENST00000544000 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
HNRNPF-207ENST00000544000 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
HNRNPF-207ENST00000544000 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
HNRNPF-207ENST00000544000 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
HNRNPF-207ENST00000544000 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
HNRNPF-207ENST00000544000 EEA1Q15075 1411 aa19.73■□□□□ 0.75
HNRNPF-207ENST00000544000 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
HNRNPF-207ENST00000544000 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
HNRNPF-207ENST00000544000 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
HNRNPF-207ENST00000544000 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
HNRNPF-207ENST00000544000 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
HNRNPF-207ENST00000544000 SOGA1O94964 1423 aa19.58■□□□□ 0.73
HNRNPF-207ENST00000544000 CEP162Q5TB80 1403 aa19.58■□□□□ 0.73
HNRNPF-207ENST00000544000 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
HNRNPF-207ENST00000544000 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
HNRNPF-207ENST00000544000 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
HNRNPF-207ENST00000544000 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
HNRNPF-207ENST00000544000 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
HNRNPF-207ENST00000544000 CCER1Q8TC90 406 aaPredicted RBP19.42■□□□□ 0.7
HNRNPF-207ENST00000544000 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
HNRNPF-207ENST00000544000 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
HNRNPF-207ENST00000544000 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.7
HNRNPF-207ENST00000544000 KIF21BO75037 1637 aa19.39■□□□□ 0.69
HNRNPF-207ENST00000544000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.38■□□□□ 0.69
HNRNPF-207ENST00000544000 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
HNRNPF-207ENST00000544000 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
HNRNPF-207ENST00000544000 CLIP1P30622 1438 aa19.22■□□□□ 0.67
HNRNPF-207ENST00000544000 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
HNRNPF-207ENST00000544000 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
HNRNPF-207ENST00000544000 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
HNRNPF-207ENST00000544000 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
HNRNPF-207ENST00000544000 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
HNRNPF-207ENST00000544000 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
HNRNPF-207ENST00000544000 NCAPD3P42695 1498 aa19.13■□□□□ 0.65
HNRNPF-207ENST00000544000 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
HNRNPF-207ENST00000544000 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.64
HNRNPF-207ENST00000544000 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
HNRNPF-207ENST00000544000 APLP2Q06481 763 aa19.06■□□□□ 0.64
HNRNPF-207ENST00000544000 PRXQ9BXM0 1461 aa19.04■□□□□ 0.64
HNRNPF-207ENST00000544000 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
HNRNPF-207ENST00000544000 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
HNRNPF-207ENST00000544000 CFTRP13569 1480 aa18.96■□□□□ 0.63
HNRNPF-207ENST00000544000 CUX1P39880 1505 aa18.96■□□□□ 0.63
HNRNPF-207ENST00000544000 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
HNRNPF-207ENST00000544000 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
HNRNPF-207ENST00000544000 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
HNRNPF-207ENST00000544000 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
HNRNPF-207ENST00000544000 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
HNRNPF-207ENST00000544000 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
HNRNPF-207ENST00000544000 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
HNRNPF-207ENST00000544000 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
HNRNPF-207ENST00000544000 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.6
HNRNPF-207ENST00000544000 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
HNRNPF-207ENST00000544000 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
HNRNPF-207ENST00000544000 CUX2O14529 1486 aa18.71■□□□□ 0.59
HNRNPF-207ENST00000544000 DHX57Q6P158 1386 aaKnown RBP18.71■□□□□ 0.59
HNRNPF-207ENST00000544000 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
HNRNPF-207ENST00000544000 IGF1RP08069 1367 aa18.69■□□□□ 0.58
HNRNPF-207ENST00000544000 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
HNRNPF-207ENST00000544000 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
HNRNPF-207ENST00000544000 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.57
HNRNPF-207ENST00000544000 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
HNRNPF-207ENST00000544000 MIER1Q8N108 512 aa18.61■□□□□ 0.57
HNRNPF-207ENST00000544000 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
HNRNPF-207ENST00000544000 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
HNRNPF-207ENST00000544000 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
HNRNPF-207ENST00000544000 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
HNRNPF-207ENST00000544000 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
HNRNPF-207ENST00000544000 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
HNRNPF-207ENST00000544000 DNMBPQ6XZF7 1577 aa18.49■□□□□ 0.55
HNRNPF-207ENST00000544000 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
HNRNPF-207ENST00000544000 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms