RNA–Protein interactions for RNA: ENST00000578324.5

EIF4A1-207, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 5

Gene EIF4A1, Length 1,577 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-207ENST00000578324 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
EIF4A1-207ENST00000578324 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
EIF4A1-207ENST00000578324 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
EIF4A1-207ENST00000578324 ABCC9O60706 1549 aa29.67■■■□□ 2.34
EIF4A1-207ENST00000578324 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
EIF4A1-207ENST00000578324 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
EIF4A1-207ENST00000578324 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
EIF4A1-207ENST00000578324 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.21
EIF4A1-207ENST00000578324 NACADO15069 1562 aa28.55■■■□□ 2.16
EIF4A1-207ENST00000578324 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
EIF4A1-207ENST00000578324 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
EIF4A1-207ENST00000578324 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
EIF4A1-207ENST00000578324 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
EIF4A1-207ENST00000578324 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
EIF4A1-207ENST00000578324 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
EIF4A1-207ENST00000578324 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
EIF4A1-207ENST00000578324 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
EIF4A1-207ENST00000578324 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
EIF4A1-207ENST00000578324 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
EIF4A1-207ENST00000578324 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
EIF4A1-207ENST00000578324 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
EIF4A1-207ENST00000578324 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
EIF4A1-207ENST00000578324 WIZO95785 1651 aa27.09■■□□□ 1.93
EIF4A1-207ENST00000578324 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
EIF4A1-207ENST00000578324 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.9
EIF4A1-207ENST00000578324 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
EIF4A1-207ENST00000578324 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
EIF4A1-207ENST00000578324 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
EIF4A1-207ENST00000578324 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
EIF4A1-207ENST00000578324 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
EIF4A1-207ENST00000578324 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
EIF4A1-207ENST00000578324 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
EIF4A1-207ENST00000578324 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
EIF4A1-207ENST00000578324 HMGXB3Q12766 1538 aa26.31■■□□□ 1.8
EIF4A1-207ENST00000578324 LOC105371045A0A1W2PR82 267 aa26.13■■□□□ 1.77
EIF4A1-207ENST00000578324 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
EIF4A1-207ENST00000578324 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
EIF4A1-207ENST00000578324 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.75
EIF4A1-207ENST00000578324 EEA1Q15075 1411 aa25.92■■□□□ 1.74
EIF4A1-207ENST00000578324 CFTRP13569 1480 aa25.84■■□□□ 1.73
EIF4A1-207ENST00000578324 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
EIF4A1-207ENST00000578324 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
EIF4A1-207ENST00000578324 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
EIF4A1-207ENST00000578324 SOGA1O94964 1423 aa25.71■■□□□ 1.71
EIF4A1-207ENST00000578324 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
EIF4A1-207ENST00000578324 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
EIF4A1-207ENST00000578324 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
EIF4A1-207ENST00000578324 NESP48681 1621 aa25.65■■□□□ 1.7
EIF4A1-207ENST00000578324 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
EIF4A1-207ENST00000578324 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
EIF4A1-207ENST00000578324 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
EIF4A1-207ENST00000578324 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
EIF4A1-207ENST00000578324 CUX1P39880 1505 aa25.52■■□□□ 1.68
EIF4A1-207ENST00000578324 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
EIF4A1-207ENST00000578324 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
EIF4A1-207ENST00000578324 KIF21BO75037 1637 aa25.48■■□□□ 1.67
EIF4A1-207ENST00000578324 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
EIF4A1-207ENST00000578324 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
EIF4A1-207ENST00000578324 PCGF6Q9BYE7 350 aa25.39■■□□□ 1.65
EIF4A1-207ENST00000578324 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
EIF4A1-207ENST00000578324 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
EIF4A1-207ENST00000578324 FANCD2Q9BXW9 1451 aa25.35■■□□□ 1.65
EIF4A1-207ENST00000578324 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
EIF4A1-207ENST00000578324 CEP162Q5TB80 1403 aa25.34■■□□□ 1.65
EIF4A1-207ENST00000578324 KIF27Q86VH2 1401 aa25.32■■□□□ 1.64
EIF4A1-207ENST00000578324 CUX2O14529 1486 aa25.3■■□□□ 1.64
EIF4A1-207ENST00000578324 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
EIF4A1-207ENST00000578324 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
EIF4A1-207ENST00000578324 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
EIF4A1-207ENST00000578324 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
EIF4A1-207ENST00000578324 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
EIF4A1-207ENST00000578324 RAPGEF2Q9Y4G8 1499 aa25.18■■□□□ 1.62
EIF4A1-207ENST00000578324 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
EIF4A1-207ENST00000578324 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
EIF4A1-207ENST00000578324 CLIP1P30622 1438 aa25.08■■□□□ 1.6
EIF4A1-207ENST00000578324 HRCP23327 699 aa25.04■■□□□ 1.6
EIF4A1-207ENST00000578324 WDR62O43379 1518 aa25.04■■□□□ 1.6
EIF4A1-207ENST00000578324 IGF1RP08069 1367 aa25.03■■□□□ 1.6
EIF4A1-207ENST00000578324 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
EIF4A1-207ENST00000578324 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
EIF4A1-207ENST00000578324 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
EIF4A1-207ENST00000578324 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
EIF4A1-207ENST00000578324 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
EIF4A1-207ENST00000578324 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
EIF4A1-207ENST00000578324 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
EIF4A1-207ENST00000578324 CUL7Q14999 1698 aa24.83■■□□□ 1.57
EIF4A1-207ENST00000578324 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
EIF4A1-207ENST00000578324 APLP2Q06481 763 aa24.76■■□□□ 1.55
EIF4A1-207ENST00000578324 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
EIF4A1-207ENST00000578324 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
EIF4A1-207ENST00000578324 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
EIF4A1-207ENST00000578324 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
EIF4A1-207ENST00000578324 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
EIF4A1-207ENST00000578324 RANGAP1P46060 587 aaPredicted RBP24.68■■□□□ 1.54
EIF4A1-207ENST00000578324 ARHGAP35Q9NRY4 1499 aa24.68■■□□□ 1.54
EIF4A1-207ENST00000578324 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
EIF4A1-207ENST00000578324 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
EIF4A1-207ENST00000578324 IFT140Q96RY7 1462 aa24.61■■□□□ 1.53
EIF4A1-207ENST00000578324 CTTNBP2Q8WZ74 1663 aa24.57■■□□□ 1.52
EIF4A1-207ENST00000578324 EFCAB5A4FU69 1503 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms