RNA–Protein interactions for RNA: ENST00000498176.1

HNRNPF-206, Transcript of heterogeneous nuclear ribonucleoprotein F, humanhuman

TSL 1 (best)

Gene HNRNPF, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPF-206ENST00000498176 NISCHQ9Y2I1 1504 aa54.33■■■■■ 6.29
HNRNPF-206ENST00000498176 CCDC180Q9P1Z9 1646 aa48.46■■■■■ 5.35
HNRNPF-206ENST00000498176 ABCC9O60706 1549 aa47.25■■■■■ 5.15
HNRNPF-206ENST00000498176 RB1CC1Q8TDY2 1594 aa45.57■■■■■ 4.89
HNRNPF-206ENST00000498176 NACADO15069 1562 aa45.5■■■■■ 4.87
HNRNPF-206ENST00000498176 DCAF8L2P0C7V8 631 aa45.28■■■■■ 4.84
HNRNPF-206ENST00000498176 ZCCHC6Q5VYS8 1495 aaKnown RBP45.26■■■■■ 4.84
HNRNPF-206ENST00000498176 MYO15BQ96JP2 1530 aa45.22■■■■■ 4.83
HNRNPF-206ENST00000498176 DCAF1Q9Y4B6 1507 aa45.01■■■■■ 4.8
HNRNPF-206ENST00000498176 UNC13AQ9UPW8 1703 aa44.59■■■■■ 4.73
HNRNPF-206ENST00000498176 BICRAQ9NZM4 1560 aa44.12■■■■■ 4.65
HNRNPF-206ENST00000498176 SCRIBQ14160 1630 aa44.1■■■■■ 4.65
HNRNPF-206ENST00000498176 PABPN1Q86U42 306 aaKnown RBP eCLIP44.06■■■■■ 4.64
HNRNPF-206ENST00000498176 SHROOM4Q9ULL8 1493 aa43.76■■■■■ 4.6
HNRNPF-206ENST00000498176 DNAJC5BQ9UF47 199 aa43.28■■■■■ 4.52
HNRNPF-206ENST00000498176 EIF4G1Q04637 1599 aaKnown RBP42.98■■■■■ 4.47
HNRNPF-206ENST00000498176 CC2D2AQ9P2K1 1620 aa42.82■■■■■ 4.44
HNRNPF-206ENST00000498176 CECR2Q9BXF3 1484 aa42.49■■■■■ 4.39
HNRNPF-206ENST00000498176 SMARCA4P51532 1647 aa42.2■■■■■ 4.35
HNRNPF-206ENST00000498176 BAZ1AQ9NRL2 1556 aaPredicted RBP42.17■■■■■ 4.34
HNRNPF-206ENST00000498176 SMARCA2P51531 1590 aa41.95■■■■■ 4.31
HNRNPF-206ENST00000498176 NCAPD3P42695 1498 aa41.92■■■■■ 4.3
HNRNPF-206ENST00000498176 ATAD2BQ9ULI0 1458 aa41.92■■■■■ 4.3
HNRNPF-206ENST00000498176 MROH2BQ7Z745 1585 aa41.84■■■■■ 4.29
HNRNPF-206ENST00000498176 PEG3Q9GZU2 1588 aa41.81■■■■■ 4.28
HNRNPF-206ENST00000498176 HMGXB3Q12766 1538 aa41.78■■■■■ 4.28
HNRNPF-206ENST00000498176 BAZ1BQ9UIG0 1483 aaKnown RBP41.61■■■■■ 4.25
HNRNPF-206ENST00000498176 WIZO95785 1651 aa41.44■■■■■ 4.22
HNRNPF-206ENST00000498176 RSF1Q96T23 1441 aaPredicted RBP41.33■■■■■ 4.21
HNRNPF-206ENST00000498176 TOP2AP11388 1531 aaKnown RBP41.01■■■■■ 4.16
HNRNPF-206ENST00000498176 LAMC3Q9Y6N6 1575 aa40.89■■■■■ 4.14
HNRNPF-206ENST00000498176 NESP48681 1621 aa40.87■■■■■ 4.13
HNRNPF-206ENST00000498176 ERCC6Q03468 1493 aa40.77■■■■■ 4.12
HNRNPF-206ENST00000498176 CADPSQ9ULU8 1353 aa40.67■■■■■ 4.1
HNRNPF-206ENST00000498176 PDS5BQ9NTI5 1447 aa40.56■■■■■ 4.08
HNRNPF-206ENST00000498176 KIF21AQ7Z4S6 1674 aa40.52■■■■■ 4.08
HNRNPF-206ENST00000498176 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
HNRNPF-206ENST00000498176 CFTRP13569 1480 aa40.45■■■■■ 4.07
HNRNPF-206ENST00000498176 CUX2O14529 1486 aa40.39■■■■■ 4.06
HNRNPF-206ENST00000498176 THOC2Q8NI27 1593 aaKnown RBP40.36■■■■■ 4.05
HNRNPF-206ENST00000498176 PRDM2Q13029 1718 aa40.34■■■■■ 4.05
HNRNPF-206ENST00000498176 FANCD2Q9BXW9 1451 aa40.23■■■■■ 4.03
HNRNPF-206ENST00000498176 CEP164Q9UPV0 1460 aa40.21■■■■■ 4.03
HNRNPF-206ENST00000498176 SUPT5HO00267 1087 aaKnown RBP40.2■■■■■ 4.03
HNRNPF-206ENST00000498176 MRC2Q9UBG0 1479 aa40.14■■■■■ 4.02
HNRNPF-206ENST00000498176 WDR62O43379 1518 aa40.03■■■■■ 4
HNRNPF-206ENST00000498176 URB2Q14146 1524 aaKnown RBP39.81■■■■□ 3.96
HNRNPF-206ENST00000498176 ABCC8Q09428 1581 aa39.64■■■■□ 3.94
HNRNPF-206ENST00000498176 TOPBP1Q92547 1522 aa39.59■■■■□ 3.93
HNRNPF-206ENST00000498176 DNMBPQ6XZF7 1577 aa39.59■■■■□ 3.93
HNRNPF-206ENST00000498176 IFT140Q96RY7 1462 aa39.36■■■■□ 3.89
HNRNPF-206ENST00000498176 CUX1P39880 1505 aa39.27■■■■□ 3.88
HNRNPF-206ENST00000498176 POLA1P09884 1462 aaPredicted RBP39.24■■■■□ 3.87
HNRNPF-206ENST00000498176 TARBP1Q13395 1621 aaKnown RBP39.19■■■■□ 3.86
HNRNPF-206ENST00000498176 FGD5Q6ZNL6 1462 aa39.14■■■■□ 3.86
HNRNPF-206ENST00000498176 ZNF608Q9ULD9 1512 aaPredicted RBP39.12■■■■□ 3.85
HNRNPF-206ENST00000498176 DNAJC5Q9H3Z4 198 aa39.09■■■■□ 3.85
HNRNPF-206ENST00000498176 EIF4G3O43432 1585 aaKnown RBP39.07■■■■□ 3.84
HNRNPF-206ENST00000498176 SOGA1O94964 1423 aa39.06■■■■□ 3.84
HNRNPF-206ENST00000498176 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
HNRNPF-206ENST00000498176 BIVM-ERCC5R4GMW8 1640 aa39.01■■■■□ 3.84
HNRNPF-206ENST00000498176 WRNQ14191 1432 aaPredicted RBP eCLIP39.01■■■■□ 3.84
HNRNPF-206ENST00000498176 TOP2BQ02880 1626 aa38.99■■■■□ 3.83
HNRNPF-206ENST00000498176 WDR97A6NE52 1622 aa38.96■■■■□ 3.83
HNRNPF-206ENST00000498176 SYNJ1O43426 1573 aa38.93■■■■□ 3.82
HNRNPF-206ENST00000498176 AQRO60306 1485 aaKnown RBP eCLIP38.88■■■■□ 3.817e-7■■■□□ 17.3
HNRNPF-206ENST00000498176 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
HNRNPF-206ENST00000498176 ABCA10Q8WWZ4 1543 aa38.79■■■■□ 3.8
HNRNPF-206ENST00000498176 PBRM1Q86U86 1689 aa38.67■■■■□ 3.78
HNRNPF-206ENST00000498176 ABCA5Q8WWZ7 1642 aa38.67■■■■□ 3.78
HNRNPF-206ENST00000498176 GRIN2BQ13224 1484 aa38.65■■■■□ 3.78
HNRNPF-206ENST00000498176 OSCARQ8IYS5 282 aa38.64■■■■□ 3.78
HNRNPF-206ENST00000498176 GAPVD1Q14C86 1478 aa38.64■■■■□ 3.78
HNRNPF-206ENST00000498176 CHD1O14646 1710 aa38.62■■■■□ 3.77
HNRNPF-206ENST00000498176 MAGI1Q96QZ7 1491 aaPredicted RBP38.57■■■■□ 3.76
HNRNPF-206ENST00000498176 SNAPC4Q5SXM2 1469 aa38.56■■■■□ 3.76
HNRNPF-206ENST00000498176 FBLN2P98095 1184 aa38.41■■■■□ 3.74
HNRNPF-206ENST00000498176 SYNJ2O15056 1496 aa38.41■■■■□ 3.74
HNRNPF-206ENST00000498176 ERICH3Q5RHP9 1530 aa38.36■■■■□ 3.73
HNRNPF-206ENST00000498176 CHMP7Q8WUX9 453 aaPredicted RBP38.33■■■■□ 3.73
HNRNPF-206ENST00000498176 ADAMTS12P58397 1594 aa38.3■■■■□ 3.72
HNRNPF-206ENST00000498176 KIF27Q86VH2 1401 aa38.21■■■■□ 3.71
HNRNPF-206ENST00000498176 FHAD1B1AJZ9 1412 aa38.19■■■■□ 3.7
HNRNPF-206ENST00000498176 GRIN2AQ12879 1464 aa38.15■■■■□ 3.7
HNRNPF-206ENST00000498176 CLASP1Q7Z460 1538 aa38.14■■■■□ 3.7
HNRNPF-206ENST00000498176 RIMBP3CA6NJZ7 1639 aa38.09■■■■□ 3.69
HNRNPF-206ENST00000498176 RIMBP3BA6NNM3 1639 aa38.09■■■■□ 3.69
HNRNPF-206ENST00000498176 RIMBP3Q9UFD9 1639 aa38.09■■■■□ 3.69
HNRNPF-206ENST00000498176 CUL7Q14999 1698 aa38.06■■■■□ 3.68
HNRNPF-206ENST00000498176 ARHGEF11O15085 1522 aa38.06■■■■□ 3.68
HNRNPF-206ENST00000498176 TRIM41Q8WV44 630 aa38.01■■■■□ 3.68
HNRNPF-206ENST00000498176 IGF1RP08069 1367 aa37.99■■■■□ 3.67
HNRNPF-206ENST00000498176 NUP160Q12769 1436 aa37.96■■■■□ 3.67
HNRNPF-206ENST00000498176 CEP170Q5SW79 1584 aa37.96■■■■□ 3.67
HNRNPF-206ENST00000498176 CARMIL1Q5VZK9 1371 aa37.79■■■■□ 3.64
HNRNPF-206ENST00000498176 RUSC2Q8N2Y8 1516 aa37.77■■■■□ 3.64
HNRNPF-206ENST00000498176 SHROOM2Q13796 1616 aa37.76■■■■□ 3.63
HNRNPF-206ENST00000498176 ARAP1Q96P48 1450 aa37.72■■■■□ 3.63
HNRNPF-206ENST00000498176 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
HNRNPF-206ENST00000498176 KIAA0586Q9BVV6 1533 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms